FFCP PHASE1:Hg19::chr17:7905946..7905966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3000 | |EntrezGene=3000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4689 | |HGNC=4689 | ||
|TSSclassifier=strong | |||
|UniProt=Q02846 | |UniProt=Q02846 | ||
|association_with_transcript=-21bp_to_ENST00000254854,NM_000180,uc002gjt.2_5end | |association_with_transcript=-21bp_to_ENST00000254854,NM_000180,uc002gjt.2_5end | ||
|cluster_id=chr17:7905946..7905966,+ | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_1_at_GUCY2D_5end | |description=CAGE_peak_1_at_GUCY2D_5end | ||
|id=chr17:7905946..7905966,+ | |id=chr17:7905946..7905966,+ | ||
|ontology_enrichment_celltype=CL:0002274!4.86e-08!5;CL:0000457!4.86e-08!5;CL:0002191!4.86e-08!5;CL:0000097!4.86e-08!5;CL:0000831!4.86e-08!5;CL:0002028!4.86e-08!5 | |ontology_enrichment_celltype=CL:0002274!4.86e-08!5;CL:0000457!4.86e-08!5;CL:0002191!4.86e-08!5;CL:0000097!4.86e-08!5;CL:0000831!4.86e-08!5;CL:0002028!4.86e-08!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;3.10e-11;4!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,3.10e-11,4;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001905!9.38e-20!2;UBERON:0002757!9.38e-20!2;UBERON:0010134!9.38e-20!2;UBERON:0002784!9.38e-20!2;UBERON:0005408!9.38e-20!2;UBERON:0001899!9.38e-20!2;UBERON:0003296!2.39e-10!4;UBERON:0010133!2.39e-10!4;UBERON:0002336!4.33e-10!1;UBERON:0001018!4.33e-10!1;UBERON:0002473!4.33e-10!1;UBERON:0005340!4.33e-10!1;UBERON:0002316!4.33e-10!1;UBERON:0003544!4.33e-10!1;UBERON:0001020!4.33e-10!1;UBERON:0005970!4.33e-10!1;UBERON:0002437!4.33e-10!1;UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1;UBERON:0000966!1.83e-08!5;UBERON:0005388!1.83e-08!5;UBERON:0001802!1.83e-08!5;UBERON:0000970!1.04e-07!20;UBERON:0002104!2.39e-07!21 | |ontology_enrichment_uberon=UBERON:0001905!9.38e-20!2;UBERON:0002757!9.38e-20!2;UBERON:0010134!9.38e-20!2;UBERON:0002784!9.38e-20!2;UBERON:0005408!9.38e-20!2;UBERON:0001899!9.38e-20!2;UBERON:0003296!2.39e-10!4;UBERON:0010133!2.39e-10!4;UBERON:0002336!4.33e-10!1;UBERON:0001018!4.33e-10!1;UBERON:0002473!4.33e-10!1;UBERON:0005340!4.33e-10!1;UBERON:0002316!4.33e-10!1;UBERON:0003544!4.33e-10!1;UBERON:0001020!4.33e-10!1;UBERON:0005970!4.33e-10!1;UBERON:0002437!4.33e-10!1;UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1;UBERON:0000966!1.83e-08!5;UBERON:0005388!1.83e-08!5;UBERON:0001802!1.83e-08!5;UBERON:0000970!1.04e-07!20;UBERON:0002104!2.39e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.16e-78;2!UBERON:0002757;1.16e-78;2!UBERON:0010134;1.16e-78;2!UBERON:0005408;1.16e-78;2!UBERON:0001899;1.16e-78;2!UBERON:0003296;4.94e-40;4!UBERON:0010133;4.94e-40;4!UBERON:0002784;4.94e-40;4!UBERON:0001894;2.02e-23;7!UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0000970;5.26e-09;20!UBERON:0002104;1.27e-08;21!UBERON:0000020;5.87e-08;23!UBERON:0001032;1.15e-07;24!UBERON:0004456;1.15e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.16e-78,2;UBERON:0002757,1.16e-78,2;UBERON:0010134,1.16e-78,2;UBERON:0005408,1.16e-78,2;UBERON:0001899,1.16e-78,2;UBERON:0003296,4.94e-40,4;UBERON:0010133,4.94e-40,4;UBERON:0002784,4.94e-40,4;UBERON:0001894,2.02e-23,7;UBERON:0006222,2.02e-23,7;UBERON:0000970,1.27e-08,21;UBERON:0002104,1.27e-08,21;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000020,1.15e-07,24;UBERON:0001032,1.15e-07,24;UBERON:0004456,1.15e-07,24 | |||
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|short_description=p1@GUCY2D | |short_description=p1@GUCY2D | ||
}} | }} |
Latest revision as of 05:21, 18 September 2015
Short description: | p1@GUCY2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GUCY2D_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -21bp_to_ENST00000254854, NM_000180, uc002gjt.2_5end |
EntrezGene: | GUCY2D |
HGNC: | 4689 |
UniProt: | Q02846 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.16e-78 | 2 |
regional part of epithalamus | 1.16e-78 | 2 |
secretory circumventricular organ | 1.16e-78 | 2 |
circumventricular organ | 1.16e-78 | 2 |
epithalamus | 1.16e-78 | 2 |
gland of diencephalon | 4.94e-40 | 4 |
neuroendocrine gland | 4.94e-40 | 4 |
regional part of diencephalon | 4.94e-40 | 4 |
diencephalon | 2.02e-23 | 7 |
future diencephalon | 2.02e-23 | 7 |
eye | 1.27e-08 | 21 |
visual system | 1.27e-08 | 21 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
sense organ | 1.15e-07 | 24 |
sensory system | 1.15e-07 | 24 |
entire sense organ system | 1.15e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.10e-11 | 4 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |