FFCP PHASE1:Hg19::chr5:56471592..56471640,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:56471592..56471640,+
|short_description=p5@GPBP1
|description=CAGE_peak_5_at_GPBP1_5end
|association_with_transcript=-132bp_to_ENST00000511209_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65056 | |EntrezGene=65056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29520 | |HGNC=29520 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-132bp_to_ENST00000511209_5end | |||
|cluster_id=chr5:56471592..56471640,+ | |||
|description=CAGE_peak_5_at_GPBP1_5end | |||
|id=chr5:56471592..56471640,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.70e-24!140;CL:0002031!8.83e-22!124;CL:0002032!2.66e-20!165;CL:0000837!2.66e-20!165;CL:0000037!3.77e-20!172;CL:0000566!3.77e-20!172;CL:0002087!1.28e-19!119;CL:0000988!9.89e-18!182;CL:0002057!1.02e-11!42;CL:0000542!1.86e-11!53;CL:0000051!1.86e-11!53;CL:0000838!2.57e-11!52;CL:0000860!6.77e-11!45;CL:0000766!1.63e-10!76;CL:0000557!3.01e-10!71;CL:0000839!5.59e-10!70;CL:0000763!9.20e-10!112;CL:0000049!9.20e-10!112;CL:0002009!3.75e-09!65;CL:0002194!3.11e-08!63;CL:0000576!3.11e-08!63;CL:0000040!3.11e-08!63;CL:0000559!3.11e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.15e-18;33!CL:0002057;1.15e-18;33!CL:0000453;4.44e-14;5!CL:0000473;6.52e-13;39!CL:0000234;6.52e-13;39!CL:0000990;2.46e-10;8!CL:0002087;2.50e-10;104!CL:0000576;2.36e-09;48!CL:0000451;2.71e-08;10!CL:0000766;2.86e-08;69!CL:0000623;3.36e-08;3!CL:0000791;2.34e-07;18!CL:0000789;2.34e-07;18!CL:0002419;2.34e-07;18!CL:0000624;7.47e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.25e-34,136;CL:0002032,2.38e-28,161;CL:0000837,2.38e-28,161;CL:0002031,4.19e-28,120;CL:0000037,1.36e-26,168;CL:0000988,1.54e-24,177;CL:0002087,5.00e-22,115;CL:0000766,1.21e-17,72;CL:0000860,3.30e-17,42;CL:0002057,3.30e-17,42;CL:0000557,1.59e-16,67;CL:0000763,2.43e-16,108;CL:0000049,2.43e-16,108;CL:0000473,2.12e-14,48;CL:0000234,2.12e-14,48;CL:0002009,4.51e-14,61;CL:0000453,5.14e-14,5;CL:0000839,9.36e-14,66;CL:0000838,6.62e-12,52;CL:0002194,1.03e-11,59;CL:0000576,1.03e-11,59;CL:0000040,1.03e-11,59;CL:0000559,1.03e-11,59;CL:0000542,1.37e-11,53;CL:0000051,1.37e-11,53;CL:0000990,3.45e-10,8;CL:0000451,3.54e-08,10;CL:0000623,5.39e-08,3;CL:0000825,5.39e-08,3;CL:0000134,6.77e-08,354;CL:0002320,1.70e-07,361;CL:0000791,2.64e-07,18;CL:0000789,2.64e-07,18;CL:0002420,2.64e-07,18;CL:0002419,2.64e-07,18;CL:0000790,2.64e-07,18;CL:0000624,5.40e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-12;42!CL:0000790;2.34e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.49e-08!102;UBERON:0003061!2.49e-08!102;UBERON:0002371!6.15e-08!80;UBERON:0001474!2.66e-07!86;UBERON:0002193!5.82e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.05e-15,76;UBERON:0001474,1.63e-13,82;UBERON:0002405,2.61e-13,93;UBERON:0002390,2.90e-12,98;UBERON:0003061,2.90e-12,98;UBERON:0004765,1.02e-11,90;UBERON:0002193,1.79e-10,108;UBERON:0001434,6.79e-10,100;UBERON:0002384,5.92e-07,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.376627918784408,0.61130724598361,0.164201178899891,0.472264687882075,0,4.98978217526377,1.39334510984468,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.601633342410425,1.73608696572681,0.223915474239924,0,0.257575567634187,0,0.755751887377619,0.242584061187816,0.464858073811369,0.411167888021826,0,10.3569261235974,2.56160706529101,2.60130452877444,5.5159308917859,1.29096936716765,0,0.376484679085209,0.272906150057846,0.449446968890169,6.42776173978895,4.49300637906531,3.19668562899521,9.23583640522805,3.39088217956774,1.70489900213078,2.03146467040009,0.56738522469114,1.24564449799115,5.02497330513487,0.521482918420201,1.52032191293582,3.63239701580021,2.20966581592539,2.84816148696796,0.845021145247767,0.637812899895131,0.419317291016752,0.22465726229299,0.300353785683013,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,1.77901850772711,1.70692089026603,0.400395987036012,0.574752439954483,0,0,2.84606484554724,4.11066032559657,2.6759125968766,2.64342657158052,4.48406850385229,0.526768169550154,4.32761494250433,3.93010762749165,1.85041349099558,0.83593247695339,0.651844533267181,1.89379122293893,0,0.668462741311041,1.47302953737419,1.55073726208535,0.541607727530031,0.512365278902701,0.650296737799391,0.493313713811028,0.276350017785848,0,1.18629250529648,0.802622484269139,0,0.793165398882963,0,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0.903450714466637,0.895906278080929,1.24930726552346,0.710331756132051,0.821127996921047,3.42731463482045,1.33720097891754,1.01377082717959,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0.132957960518865,1.19245312152671,0.571994910780128,0,0,0,0,0,0,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.375355559615893,0.277064115484183,0,0,0,0.226864366320042,0,0.213557388818567,0,0.300091096084402,0,0,0,0,0.194874010322397,0,0.184099797284599,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0.397589304964456,0.348581828608555,0.310983165046111,0,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0.241011029883482,0.330881918197182,0,0,0.269662616320329,0,0,0,0,0,0,1.26755034821831,0,0,0,0.614942192715568,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,0,0,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0.358234090811393,0,0,0.985326475791887,0.088048434013226,2.07328115540772,1.44119953416961,1.8936365013957,0,0,0,0,0,0,0.857479297891735,0,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,2.56139988262505,3.45004119775228,1.02674429023799,1.01637849688985,0,0,0.335032530668698,0.637938751653163,1.49801404789436,0,0.828831026872071,0.24538298343828,0.500170521059677,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.431428401637234,0.533637789017222,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,1.48418066444991,0,0,0,0,0.232420756919918,0.362578348774867,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0.438519753291869,0.261435451024901,0,0,0,0.103041011647722,0.27470839445503,0.247528499761764,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0.495854746082934,0.192190067365106,0.382838137483752,0.4046311234222,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0,0,0.427296284509893,3.84991942105343,0.245040215981032,0.371606350251437,0.28853842595289,0.284567373393656,0,0.59873811429845,0.191505370132367,0.211673582723883,0,0.280797178113459,0.456469358066384,0.313359791546046,2.50634477090067,0.50787533340481,0,0.605399121573143,0,0,0.307240764308458,0,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,0.37428108081644,0,0.121360521749513,0.557216921387392,0.568272293612826,0.23874448473769,0,0.921482106297696,2.98244294329889,0.703347082052564,0.222617410045812,0.824019371133798,2.32237948940793,0.597743964753209,0.828851746593443,0,0.20453736500431,1.10776324914963,0,0.539210106883961,0.179021174675609,0,0.394573622547734,0,0,0,0.4638404908092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| ||
|short_description=p5@GPBP1 | |||
}} | }} |
Latest revision as of 05:54, 18 September 2015
Short description: | p5@GPBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -132bp_to_ENST00000511209_5end |
EntrezGene: | GPBP1 |
HGNC: | 29520 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.05e-15 | 76 |
bone element | 1.63e-13 | 82 |
immune system | 2.61e-13 | 93 |
hematopoietic system | 2.90e-12 | 98 |
blood island | 2.90e-12 | 98 |
skeletal element | 1.02e-11 | 90 |
hemolymphoid system | 1.79e-10 | 108 |
skeletal system | 6.79e-10 | 100 |
connective tissue | 5.92e-07 | 371 |