FFCP PHASE1:Hg19::chr12:40019980..40020014,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26846 | |||
|TSSclassifier=strong | |||
|UniProt=Q86WS4 | |||
|association_with_transcript=0bp_to_ENST00000324616_5end | |||
|cluster_id=chr12:40019980..40020014,+ | |||
|description=CAGE_peak_1_at_C12orf40_5end | |||
|id=chr12:40019980..40020014,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.44e-33!7;CL:0000586!2.44e-33!7;CL:0002322!2.91e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.99e-10;2!CL:0000137;2.99e-10;2!CL:0000092;2.99e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.99e-10,2;CL:0000137,2.99e-10,2;CL:0000092,2.99e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.03e-17;10!UBERON:0005564;6.03e-17;10 | |||
|ontology_enrichment_disease=DOID:1036!1.36e-11!8;DOID:0060085!5.57e-11!1;DOID:3165!5.57e-11!1;DOID:0060121!5.57e-11!1;DOID:2438!5.57e-11!1;DOID:4418!5.57e-11!1;DOID:3095!1.41e-10!22;DOID:2994!1.41e-10!22;DOID:8692!1.13e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.82e-21;8!DOID:0060085;3.91e-19;1!DOID:3165;3.91e-19;1!DOID:0060121;3.91e-19;1!DOID:2438;3.91e-19;1!DOID:4418;3.91e-19;1!DOID:200;2.99e-10;2!DOID:4305;2.99e-10;2!DOID:8692;5.66e-10;31!DOID:2531;3.30e-08;51!DOID:0060083;3.30e-08;51!DOID:1240;2.52e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.16e-21,8;DOID:0060085,3.91e-19,1;DOID:3165,3.91e-19,1;DOID:0060121,3.91e-19,1;DOID:2438,3.91e-19,1;DOID:4418,3.91e-19,1;DOID:200,2.99e-10,2;DOID:4305,2.99e-10,2;DOID:8692,1.20e-09,31;DOID:2531,6.71e-09,51;DOID:0060083,6.71e-09,51;DOID:1240,1.00e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.76e-42!8;UBERON:0003135!7.89e-31!11;UBERON:0000991!5.45e-16!21;UBERON:0009196!5.45e-16!21;UBERON:0009117!5.45e-16!21;UBERON:0005564!5.45e-16!21;UBERON:0004176!3.02e-15!22;UBERON:0003101!3.02e-15!22;UBERON:0000079!3.02e-15!22;UBERON:0002323!4.61e-07!46;UBERON:0003133!9.49e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.33e-21;8!UBERON:0003135;1.81e-15;11!UBERON:0000991;2.13e-08;21!UBERON:0003101;4.83e-08;22!UBERON:0000079;4.83e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.82e-21,8;UBERON:0003135,1.68e-15,11;UBERON:0000991,2.05e-08,21;UBERON:0009196,2.05e-08,21;UBERON:0009117,2.05e-08,21;UBERON:0005564,2.05e-08,21;UBERON:0004176,4.66e-08,22;UBERON:0003101,4.66e-08,22;UBERON:0000079,4.66e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0,0,10.3774003883903,10.5873768531579,8.22325776181629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18586072873289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9795139432945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0.26721740526556,0.459474497674225,1.75495277504663,10.9121325434265,15.005991288746,0,0,0,0,0,0,3.3639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@C12orf40 | |||
}} |
Latest revision as of 06:27, 18 September 2015
Short description: | p1@C12orf40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C12orf40_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000324616_5end |
EntrezGene: | C12orf40 |
HGNC: | 26846 |
UniProt: | Q86WS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.99e-10 | 2 |
osteocyte | 2.99e-10 | 2 |
osteoclast | 2.99e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 4.82e-21 | 8 |
male reproductive organ | 1.68e-15 | 11 |
gonad | 2.05e-08 | 21 |
indifferent external genitalia | 2.05e-08 | 21 |
indifferent gonad | 2.05e-08 | 21 |
gonad primordium | 2.05e-08 | 21 |
external genitalia | 4.66e-08 | 22 |
male organism | 4.66e-08 | 22 |
male reproductive system | 4.66e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.16e-21 | 8 |
organ system benign neoplasm | 3.91e-19 | 1 |
skin benign neoplasm | 3.91e-19 | 1 |
integumentary system benign neoplasm | 3.91e-19 | 1 |
dermis tumor | 3.91e-19 | 1 |
cutaneous fibrous histiocytoma | 3.91e-19 | 1 |
giant cell tumor | 2.99e-10 | 2 |
bone giant cell tumor | 2.99e-10 | 2 |
myeloid leukemia | 1.20e-09 | 31 |
hematologic cancer | 6.71e-09 | 51 |
immune system cancer | 6.71e-09 | 51 |
leukemia | 1.00e-07 | 39 |