FFCP PHASE1:Hg19::chr2:174830540..174830563,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6670 | |EntrezGene=6670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11208 | |HGNC=11208 | ||
|TSSclassifier=strong | |||
|UniProt=Q02447,B7ZLN9,Q59FX5,Q86TP0 | |UniProt=Q02447,B7ZLN9,Q59FX5,Q86TP0 | ||
|association_with_transcript=-110bp_to_ENST00000310015,ENST00000455789,NM_001172712,NM_003111_5end | |association_with_transcript=-110bp_to_ENST00000310015,ENST00000455789,NM_001172712,NM_003111_5end | ||
|cluster_id=chr2:174830540..174830563,- | |||
|description=CAGE_peak_8_at_SP3_5end | |description=CAGE_peak_8_at_SP3_5end | ||
|id=chr2:174830540..174830563,- | |id=chr2:174830540..174830563,- | ||
|ontology_enrichment_celltype=CL:0002057!1.35e-16!42;CL:0000738!1.31e-15!140;CL:0000860!3.55e-15!45;CL:0002087!9.72e-15!119;CL:0000766!2.22e-14!76;CL:0002031!2.37e-13!124;CL:0002194!6.37e-13!63;CL:0000576!6.37e-13!63;CL:0000040!6.37e-13!63;CL:0000559!6.37e-13!63;CL:0000839!1.69e-12!70;CL:0000557!1.88e-12!71;CL:0002009!3.93e-12!65;CL:0000037!8.57e-11!172;CL:0000566!8.57e-11!172;CL:0000988!2.28e-09!182;CL:0002032!5.74e-09!165;CL:0000837!5.74e-09!165;CL:0000134!8.59e-08!358;CL:0002320!1.43e-07!365;CL:0000219!6.88e-07!390 | |ontology_enrichment_celltype=CL:0002057!1.35e-16!42;CL:0000738!1.31e-15!140;CL:0000860!3.55e-15!45;CL:0002087!9.72e-15!119;CL:0000766!2.22e-14!76;CL:0002031!2.37e-13!124;CL:0002194!6.37e-13!63;CL:0000576!6.37e-13!63;CL:0000040!6.37e-13!63;CL:0000559!6.37e-13!63;CL:0000839!1.69e-12!70;CL:0000557!1.88e-12!71;CL:0002009!3.93e-12!65;CL:0000037!8.57e-11!172;CL:0000566!8.57e-11!172;CL:0000988!2.28e-09!182;CL:0002032!5.74e-09!165;CL:0000837!5.74e-09!165;CL:0000134!8.59e-08!358;CL:0002320!1.43e-07!365;CL:0000219!6.88e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000576;4.74e-16;48!CL:0000860;3.61e-15;33!CL:0002057;3.61e-15;33!CL:0000766;9.38e-15;69!CL:0000473;1.08e-12;39!CL:0000234;1.08e-12;39!CL:0000236;1.24e-11;13!CL:0002087;2.14e-08;104!CL:0002393;9.17e-08;6!CL:0002397;9.17e-08;6!CL:0000738;1.41e-07;136!CL:0000763;2.88e-07;100 | |ontology_enrichment_celltype_v019=CL:0000576;4.74e-16;48!CL:0000860;3.61e-15;33!CL:0002057;3.61e-15;33!CL:0000766;9.38e-15;69!CL:0000473;1.08e-12;39!CL:0000234;1.08e-12;39!CL:0000236;1.24e-11;13!CL:0002087;2.14e-08;104!CL:0002393;9.17e-08;6!CL:0002397;9.17e-08;6!CL:0000738;1.41e-07;136!CL:0000763;2.88e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.68e-31,136;CL:0002087,1.70e-27,115;CL:0000766,2.17e-27,72;CL:0000473,1.60e-25,48;CL:0000234,1.60e-25,48;CL:0000037,1.76e-25,168;CL:0000860,1.84e-25,42;CL:0002057,1.84e-25,42;CL:0002031,3.89e-25,120;CL:0002194,1.71e-23,59;CL:0000576,1.71e-23,59;CL:0000040,1.71e-23,59;CL:0000559,1.71e-23,59;CL:0000839,6.21e-23,66;CL:0000988,6.74e-23,177;CL:0002032,9.38e-23,161;CL:0000837,9.38e-23,161;CL:0000557,1.73e-22,67;CL:0002009,2.81e-22,61;CL:0000763,6.56e-18,108;CL:0000049,6.56e-18,108;CL:0000134,3.11e-12,354;CL:0002393,1.76e-11,9;CL:0002397,1.76e-11,9;CL:0002320,1.92e-11,361;CL:0000236,5.30e-11,14;CL:0000219,2.55e-10,386;CL:0000048,1.24e-08,427;CL:0000723,1.81e-08,433;CL:0000034,3.29e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-18;42!CL:0000049;6.41e-07;108 | |ontology_enrichment_development_v019=CL:0002057;3.77e-18;42!CL:0000049;6.41e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.55e-11!102;UBERON:0003061!3.55e-11!102;UBERON:0002371!6.06e-10!80;UBERON:0002193!1.63e-09!112;UBERON:0002405!2.76e-08!115;UBERON:0001474!3.35e-08!86;UBERON:0002384!8.00e-08!375;UBERON:0004765!5.93e-07!101;UBERON:0001434!5.93e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!3.55e-11!102;UBERON:0003061!3.55e-11!102;UBERON:0002371!6.06e-10!80;UBERON:0002193!1.63e-09!112;UBERON:0002405!2.76e-08!115;UBERON:0001474!3.35e-08!86;UBERON:0002384!8.00e-08!375;UBERON:0004765!5.93e-07!101;UBERON:0001434!5.93e-07!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-18,98;UBERON:0003061,1.37e-18,98;UBERON:0002371,3.72e-18,76;UBERON:0001474,7.90e-16,82;UBERON:0002193,2.15e-15,108;UBERON:0004765,3.59e-14,90;UBERON:0002405,2.07e-12,93;UBERON:0002384,1.17e-11,371;UBERON:0001434,1.89e-11,100;UBERON:0003081,6.19e-07,203 | |||
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| ||
|short_description=p8@SP3 | |short_description=p8@SP3 | ||
}} | }} |
Latest revision as of 06:45, 18 September 2015
Short description: | p8@SP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -110bp_to_ENST00000310015, ENST00000455789, NM_001172712, NM_003111_5end |
EntrezGene: | SP3 |
HGNC: | 11208 |
UniProt: | Q02447B7ZLN9Q59FX5Q86TP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.37e-18 | 98 |
blood island | 1.37e-18 | 98 |
bone marrow | 3.72e-18 | 76 |
bone element | 7.90e-16 | 82 |
hemolymphoid system | 2.15e-15 | 108 |
skeletal element | 3.59e-14 | 90 |
immune system | 2.07e-12 | 93 |
connective tissue | 1.17e-11 | 371 |
skeletal system | 1.89e-11 | 100 |
lateral plate mesoderm | 6.19e-07 | 203 |