FFCP PHASE1:Hg19::chr8:42040287..42040298,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:42040287..42040298,-
|short_description=p10@PLAT
|description=CAGE_peak_10_at_PLAT_5end
|association_with_transcript=0bp_to_V00570_5end
|EntrezGene=5327
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5327 | |EntrezGene=5327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9051 | |HGNC=9051 | ||
|TSSclassifier=strong | |||
|UniProt=P00750 | |UniProt=P00750 | ||
|association_with_transcript=0bp_to_V00570_5end | |||
|cluster_id=chr8:42040287..42040298,- | |||
|coexpression_cluster_id=C471 | |||
|description=CAGE_peak_10_at_PLAT_5end | |||
|id=chr8:42040287..42040298,- | |||
|ontology_enrichment_celltype=CL:0000183!6.62e-13!59;CL:0000680!4.41e-11!57;CL:0000056!4.41e-11!57;CL:0000355!4.41e-11!57;CL:0000187!1.07e-10!54;CL:0000393!4.44e-10!60;CL:0000211!4.44e-10!60;CL:0000192!7.92e-10!42;CL:0000514!7.92e-10!42;CL:0000055!9.02e-10!180;CL:1000306!1.03e-08!4;CL:0002547!1.03e-08!4;CL:0000222!1.70e-07!119;CL:0002504!6.58e-07!3;CL:1000279!6.58e-07!3;CL:1000280!6.58e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002591;6.47e-17;1!CL:0002379;8.85e-17;1!CL:1000306;3.07e-16;4!CL:0002547;3.07e-16;4!CL:0000359;2.89e-12;32!CL:0000650;6.93e-09;2!CL:1000500;6.93e-09;2!CL:1000618;6.93e-09;2!CL:1001318;6.93e-09;2!CL:0002173;6.93e-09;2!CL:0002593;6.93e-09;2!CL:0000192;2.19e-07;43!CL:0002539;5.59e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,6.47e-17,1;CL:0002379,1.04e-16,1;CL:1000306,2.44e-16,4;CL:0002547,2.44e-16,4;CL:0000359,6.67e-12,32;CL:0000650,6.94e-09,2;CL:1000500,6.94e-09,2;CL:1000618,6.94e-09,2;CL:1001318,6.94e-09,2;CL:0002173,6.94e-09,2;CL:0000192,7.38e-09,43;CL:0000514,7.38e-09,43;CL:0002593,8.09e-09,2;CL:0002539,5.43e-07,10;CL:0000187,6.46e-07,55 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.47e-14;10!CL:0000514;2.19e-07;43 | |||
|ontology_enrichment_disease=DOID:0060084!1.04e-07!3;DOID:127!1.04e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.83e-47;3!DOID:127;8.83e-47;3!DOID:0060072;2.65e-35;4!DOID:3620;8.85e-17;1!DOID:3565;8.85e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.41e-46,3;DOID:127,1.41e-46,3;DOID:0060072,3.77e-35,4;DOID:3620,1.04e-16,1;DOID:3565,1.04e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0004290!6.91e-11!70;UBERON:0001134!5.79e-10!61;UBERON:0002036!5.79e-10!61;UBERON:0003082!5.79e-10!61;UBERON:0000914!8.17e-10!83;UBERON:0002329!8.17e-10!83;UBERON:0003077!8.17e-10!83;UBERON:0003059!8.17e-10!83;UBERON:0007282!8.17e-10!83;UBERON:0009618!8.17e-10!83;UBERON:0007285!8.17e-10!83;UBERON:0002385!1.84e-09!63;UBERON:0001015!1.84e-09!63;UBERON:0000383!1.84e-09!63;UBERON:0000486!3.35e-09!82;UBERON:0000415!1.03e-08!4;UBERON:0007240!1.03e-08!4;UBERON:0005742!1.03e-08!4;UBERON:0005734!1.03e-08!4;UBERON:0004664!1.03e-08!4;UBERON:0004663!1.03e-08!4;UBERON:0005256!1.48e-08!143;UBERON:0004573!1.12e-07!33;UBERON:0004571!1.12e-07!33;UBERON:0001637!1.82e-07!42;UBERON:0003509!1.82e-07!42;UBERON:0004572!1.82e-07!42;UBERON:0003498!6.75e-07!5;UBERON:0005985!6.75e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.07e-16;4!UBERON:0000415;3.07e-16;4!UBERON:0007240;3.07e-16;4!UBERON:0005742;3.07e-16;4!UBERON:0005734;3.07e-16;4!UBERON:0004664;3.07e-16;4!UBERON:0004663;3.07e-16;4!UBERON:0004573;7.84e-16;33!UBERON:0004571;7.84e-16;33!UBERON:0001637;1.07e-12;42!UBERON:0003509;1.07e-12;42!UBERON:0004572;1.07e-12;42!UBERON:0000947;6.95e-12;21!UBERON:0010191;6.95e-12;21!UBERON:0003914;2.97e-10;74!UBERON:0000078;4.02e-09;2!UBERON:0002012;4.02e-09;2!UBERON:0008886;4.02e-09;2!UBERON:0003567;6.93e-09;2!UBERON:0003838;6.93e-09;2!UBERON:0003586;6.93e-09;2!UBERON:0005169;6.93e-09;2!UBERON:0002321;6.93e-09;2!UBERON:0002456;6.93e-09;2!UBERON:0005215;6.93e-09;2!UBERON:0002303;6.93e-09;2!UBERON:0002319;6.93e-09;2!UBERON:0000995;8.30e-09;17!UBERON:0007500;1.46e-08;56!UBERON:0001981;1.46e-08;56!UBERON:0004537;1.46e-08;56!UBERON:0003975;2.39e-08;18!UBERON:0000055;3.24e-08;65!UBERON:0004175;3.14e-07;21!UBERON:0004237;5.59e-07;10!UBERON:0004695;5.59e-07;10!UBERON:0002111;5.59e-07;10!UBERON:0004178;5.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.53e-17,42;UBERON:0003509,2.53e-17,42;UBERON:0004572,2.53e-17,42;UBERON:0000415,2.44e-16,4;UBERON:0007240,2.44e-16,4;UBERON:0005742,2.44e-16,4;UBERON:0005734,2.44e-16,4;UBERON:0004664,2.44e-16,4;UBERON:0004663,2.44e-16,4;UBERON:0004573,2.44e-16,33;UBERON:0004571,2.44e-16,33;UBERON:0003498,2.85e-13,5;UBERON:0005985,2.85e-13,5;UBERON:0007500,3.25e-12,59;UBERON:0001981,3.25e-12,59;UBERON:0004537,3.25e-12,59;UBERON:0006965,3.25e-12,59;UBERON:0000947,6.20e-12,21;UBERON:0010191,6.20e-12,21;UBERON:0000055,1.54e-10,68;UBERON:0004797,9.52e-10,7;UBERON:0002049,3.99e-09,78;UBERON:0007798,3.99e-09,78;UBERON:0000078,4.02e-09,2;UBERON:0007497,4.02e-09,2;UBERON:0003643,4.02e-09,2;UBERON:0003504,4.02e-09,2;UBERON:0003469,4.02e-09,2;UBERON:0003496,4.02e-09,2;UBERON:0002012,4.02e-09,2;UBERON:0008886,4.02e-09,2;UBERON:0007303,4.02e-09,2;UBERON:0002061,4.02e-09,2;UBERON:0005432,4.02e-09,2;UBERON:0004363,4.02e-09,2;UBERON:0003567,6.94e-09,2;UBERON:0003838,6.94e-09,2;UBERON:0003586,6.94e-09,2;UBERON:0005169,6.94e-09,2;UBERON:0002321,6.94e-09,2;UBERON:0005215,6.94e-09,2;UBERON:0002303,6.94e-09,2;UBERON:0002319,6.94e-09,2;UBERON:0002456,8.09e-09,2;UBERON:0004872,1.52e-08,83;UBERON:0003914,1.13e-07,117;UBERON:0000995,3.35e-07,21;UBERON:0004237,5.43e-07,10;UBERON:0004695,5.43e-07,10;UBERON:0002111,5.43e-07,10;UBERON:0004178,5.43e-07,10;UBERON:0005795,6.75e-07,22;UBERON:0003975,6.75e-07,22;UBERON:0007503,9.18e-07,78 | |||
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| ||
|short_description=p10@PLAT | |||
}} | }} |
Latest revision as of 07:33, 18 September 2015
Short description: | p10@PLAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PLAT_5end |
Coexpression cluster: | C471_Smooth_Fibroblast_leiomyoma_mesenchymal_Mesothelial_meningioma_Prostate |
Association with transcript: | 0bp_to_V00570_5end |
EntrezGene: | PLAT |
HGNC: | 9051 |
UniProt: | P00750 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 6.47e-17 | 1 |
meningothelial cell | 1.04e-16 | 1 |
fibroblast of tunica adventitia of artery | 2.44e-16 | 4 |
fibroblast of the aortic adventitia | 2.44e-16 | 4 |
vascular associated smooth muscle cell | 6.67e-12 | 32 |
mesangial cell | 6.94e-09 | 2 |
kidney interstitial cell | 6.94e-09 | 2 |
juxtaglomerular complex cell | 6.94e-09 | 2 |
renal interstitial pericyte | 6.94e-09 | 2 |
extraglomerular mesangial cell | 6.94e-09 | 2 |
smooth muscle cell | 7.38e-09 | 43 |
smooth muscle myoblast | 7.38e-09 | 43 |
smooth muscle cell of the internal thoracic artery | 8.09e-09 | 2 |
aortic smooth muscle cell | 5.43e-07 | 10 |
muscle cell | 6.46e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.41e-46 | 3 |
leiomyoma | 1.41e-46 | 3 |
benign neoplasm | 3.77e-35 | 4 |
central nervous system cancer | 1.04e-16 | 1 |
meningioma | 1.04e-16 | 1 |