FFCP PHASE1:Hg19::chr2:71680624..71680635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8291 | |EntrezGene=8291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3097 | |HGNC=3097 | ||
|TSSclassifier=strong | |||
|UniProt=O75923 | |UniProt=O75923 | ||
|association_with_transcript=-117bp_to_NM_001130976,NM_001130977,NM_001130978,NM_001130979,NM_001130980,NM_001130981,NM_003494,uc002sie.2,uc002sig.3,uc010fee.2,uc010fef.2,uc010feg.2,uc010feh.2,uc010fei.2,uc010yqx.1_5end | |association_with_transcript=-117bp_to_NM_001130976,NM_001130977,NM_001130978,NM_001130979,NM_001130980,NM_001130981,NM_003494,uc002sie.2,uc002sig.3,uc010fee.2,uc010fef.2,uc010feg.2,uc010feh.2,uc010fei.2,uc010yqx.1_5end | ||
|cluster_id=chr2:71680624..71680635,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_13_at_DYSF_5end | |description=CAGE_peak_13_at_DYSF_5end | ||
|id=chr2:71680624..71680635,+ | |id=chr2:71680624..71680635,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.55e-23!42;CL:0000766!1.25e-22!76;CL:0000860!1.72e-20!45;CL:0002194!1.21e-19!63;CL:0000576!1.21e-19!63;CL:0000040!1.21e-19!63;CL:0000559!1.21e-19!63;CL:0002009!1.32e-18!65;CL:0000839!2.75e-16!70;CL:0000557!7.24e-16!71;CL:0000115!1.68e-14!35;CL:0002139!1.19e-12!24;CL:0000763!2.57e-12!112;CL:0000049!2.57e-12!112;CL:0002078!7.62e-11!44;CL:0000071!3.26e-09!18;CL:0002546!3.26e-09!18;CL:0000213!2.19e-08!57;CL:0000215!2.19e-08!57;CL:0000094!5.63e-08!8;CL:0000738!1.32e-07!140 | |ontology_enrichment_celltype=CL:0002057!7.55e-23!42;CL:0000766!1.25e-22!76;CL:0000860!1.72e-20!45;CL:0002194!1.21e-19!63;CL:0000576!1.21e-19!63;CL:0000040!1.21e-19!63;CL:0000559!1.21e-19!63;CL:0002009!1.32e-18!65;CL:0000839!2.75e-16!70;CL:0000557!7.24e-16!71;CL:0000115!1.68e-14!35;CL:0002139!1.19e-12!24;CL:0000763!2.57e-12!112;CL:0000049!2.57e-12!112;CL:0002078!7.62e-11!44;CL:0000071!3.26e-09!18;CL:0002546!3.26e-09!18;CL:0000213!2.19e-08!57;CL:0000215!2.19e-08!57;CL:0000094!5.63e-08!8;CL:0000738!1.32e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.50e-17;33!CL:0002057;1.50e-17;33!CL:0000115;3.62e-16;36!CL:0000576;1.99e-15;48!CL:0000473;1.92e-14;39!CL:0000234;1.92e-14;39!CL:0000775;5.32e-13;3!CL:0000094;1.24e-12;8!CL:0000766;1.15e-10;69!CL:0002078;6.47e-10;45!CL:0000771;3.62e-09;2!CL:0000081;4.46e-09;11!CL:0002139;6.45e-09;24!CL:0002262;3.11e-08;2!CL:1000398;3.11e-08;2!CL:0000071;3.39e-07;18!CL:1000413;4.13e-07;9!CL:0000763;4.69e-07;100!CL:0000213;5.03e-07;58!CL:0000215;5.03e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.06e-25,72;CL:0000860,3.90e-21,42;CL:0002057,3.90e-21,42;CL:0000473,3.09e-20,48;CL:0000234,3.09e-20,48;CL:0002194,2.29e-19,59;CL:0000576,2.29e-19,59;CL:0000040,2.29e-19,59;CL:0000559,2.29e-19,59;CL:0002009,1.39e-18,61;CL:0000115,2.17e-17,36;CL:0000839,7.86e-17,66;CL:0000763,1.18e-16,108;CL:0000049,1.18e-16,108;CL:0000557,1.64e-16,67;CL:0002078,2.94e-13,45;CL:0000775,4.53e-13,3;CL:0000094,1.04e-12,8;CL:0000738,6.80e-12,136;CL:0000213,1.41e-09,58;CL:0000215,1.41e-09,58;CL:0000988,1.84e-09,177;CL:0000037,2.06e-09,168;CL:0000771,3.18e-09,2;CL:0002032,3.57e-09,161;CL:0000837,3.57e-09,161;CL:0000081,3.94e-09,11;CL:0002139,4.99e-09,24;CL:0002087,1.02e-08,115;CL:0002262,1.43e-08,2;CL:1000398,1.43e-08,2;CL:0000071,2.70e-07,18;CL:0002546,2.70e-07,18;CL:0002031,2.91e-07,120;CL:1000413,3.90e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-15;42!CL:0002546;3.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.08e-22!112;UBERON:0002390!1.71e-18!102;UBERON:0003061!1.71e-18!102;UBERON:0003081!1.44e-17!216;UBERON:0002405!6.93e-16!115;UBERON:0002371!1.35e-12!80;UBERON:0001474!7.71e-11!86;UBERON:0001986!3.26e-09!18;UBERON:0004638!3.26e-09!18;UBERON:0004852!3.26e-09!18;UBERON:0007023!3.22e-08!115;UBERON:0004765!4.59e-08!101;UBERON:0001434!4.59e-08!101;UBERON:0001009!7.42e-08!113;UBERON:0004535!7.91e-08!110;UBERON:0000487!8.42e-07!22 | |ontology_enrichment_uberon=UBERON:0002193!8.08e-22!112;UBERON:0002390!1.71e-18!102;UBERON:0003061!1.71e-18!102;UBERON:0003081!1.44e-17!216;UBERON:0002405!6.93e-16!115;UBERON:0002371!1.35e-12!80;UBERON:0001474!7.71e-11!86;UBERON:0001986!3.26e-09!18;UBERON:0004638!3.26e-09!18;UBERON:0004852!3.26e-09!18;UBERON:0007023!3.22e-08!115;UBERON:0004765!4.59e-08!101;UBERON:0001434!4.59e-08!101;UBERON:0001009!7.42e-08!113;UBERON:0004535!7.91e-08!110;UBERON:0000487!8.42e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.95e-08;15!UBERON:0000179;1.95e-08;15!UBERON:0000463;1.95e-08;15!UBERON:0001281;3.11e-08;2!UBERON:0003497;3.11e-08;2!UBERON:0003909;3.11e-08;2!UBERON:0003835;3.11e-08;2!UBERON:0004638;3.39e-07;18!UBERON:0001986;3.39e-07;18!UBERON:0004852;3.39e-07;18!UBERON:0003915;4.13e-07;9!UBERON:0004700;4.13e-07;9!UBERON:0001917;4.13e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.03e-23,108;UBERON:0002390,4.82e-22,98;UBERON:0003061,4.82e-22,98;UBERON:0003081,9.84e-20,203;UBERON:0002405,2.33e-16,93;UBERON:0002371,5.12e-14,76;UBERON:0001474,1.16e-12,82;UBERON:0004765,3.90e-11,90;UBERON:0000926,4.61e-11,315;UBERON:0004120,4.61e-11,315;UBERON:0006603,4.61e-11,315;UBERON:0001434,1.41e-09,100;UBERON:0001281,1.43e-08,2;UBERON:0003497,1.43e-08,2;UBERON:0003909,1.43e-08,2;UBERON:0003835,1.43e-08,2;UBERON:0000178,2.17e-08,15;UBERON:0000179,2.17e-08,15;UBERON:0000463,2.17e-08,15;UBERON:0003887,2.62e-07,12;UBERON:0004638,2.70e-07,18;UBERON:0001986,2.70e-07,18;UBERON:0004852,2.70e-07,18;UBERON:0003915,3.90e-07,9;UBERON:0004700,3.90e-07,9;UBERON:0001917,3.90e-07,9;UBERON:0004535,7.24e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.77408061658038,0,0,0,0,0,0,3.32397245119126,1.00272223735071,1.30206522429511,0.895661896959697,1.94336199611388,1.03030227053675,1.01778767145695,0.755751887377619,1.69808842831471,0.929716147622738,0.411167888021826,0.309706370895104,0.575384784644301,1.2808035326455,1.18241114944293,0.689491361473237,1.29096936716765,0,1.31769637679823,0.545812300115692,0.449446968890169,1.22433556948361,0.320929027076094,0,0.659702600373432,1.59570926097305,0.426224750532694,2.90209238628584,0.56738522469114,1.24564449799115,1.25624332628372,0,0.868755378820466,0,1.10483290796269,0.949387162322653,0,0,0.209658645508376,1.23561494261145,0.901061357049038,2.08943262706204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.0654895377488563,0,0,0,0.522389211897802,0.664789802594326,0,0,0,1.39133685156694,0.860234595106124,2.08284300964557,0,2.09749718104953,0.825354125820202,0.835979866147242,1.8089173141853,0.71153252537342,0,3.22263453687318,0,1.70843440283719,2.57364156242108,0,0.625098097988558,0.673588117878509,0.337834441449967,0,0,0.916008719652036,2.63560834872127,3.87780264148325,0,0,0,0.132409180813219,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0.151357427644931,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,0,1.26755034821831,0,0,0,0,0.343135620597051,0,0,0,0.185176890317059,0,0,0,0,0,1.01056513432752,0.462985512576611,0.761016608938393,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74503511973591,2.99161459204025,14.0901274568252,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,1.03384013061444,0.647142602455851,0.426910231213777,0.303127571446259,0,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,1.53084334748864,1.0795795805107,0,0.270946437543853,1.00337954770971,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0,1.30012049207304,0,0.096670718292122,0,0.15350367472613,0,0,0,0.255679882248303,0,0.330569830721956,0,0,0,0,0,0,0,0,0,0,0,1.116475108079,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,1.52234282769651,0,2.27858874869665,0.476463550915578,0.411362273086194,1.29694662238543,1.08006287447623,2.37937552888281,0,0,0,0,0,0,0,0,0,1.48171507906718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0.46112780877612,0,0.325942115766024,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0.258565912723101,0.26446520348538,0,0,0.854299300541557,0.157204305099666,0,0.496166021811951,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0.366078794705889,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0.261906694481422,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0,0.354809480650555,0,0,0.611727596791485,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0.231522474323834,0,0,0.245148321753905,0.235676547101626,0.196308467114945,0,0,0.169927114687817,1.50374268767766,1.22469987149797,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.124149428591716,0,0.25458863311266,0.202117188958219,0,0.342233301085281,0.134704106029175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| ||
|short_description=p13@DYSF | |short_description=p13@DYSF | ||
}} | }} |
Latest revision as of 07:56, 18 September 2015
Short description: | p13@DYSF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_DYSF_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -117bp_to_NM_001130976, NM_001130977, NM_001130978, NM_001130979, NM_001130980, NM_001130981, NM_003494, uc002sie.2, uc002sig.3, uc010fee.2, uc010fef.2, uc010feg.2, uc010feh.2, uc010fei.2, uc010yqx.1_5end |
EntrezGene: | DYSF |
HGNC: | 3097 |
UniProt: | O75923 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.03e-23 | 108 |
hematopoietic system | 4.82e-22 | 98 |
blood island | 4.82e-22 | 98 |
lateral plate mesoderm | 9.84e-20 | 203 |
immune system | 2.33e-16 | 93 |
bone marrow | 5.12e-14 | 76 |
bone element | 1.16e-12 | 82 |
skeletal element | 3.90e-11 | 90 |
mesoderm | 4.61e-11 | 315 |
mesoderm-derived structure | 4.61e-11 | 315 |
presumptive mesoderm | 4.61e-11 | 315 |
skeletal system | 1.41e-09 | 100 |
hepatic sinusoid | 1.43e-08 | 2 |
abdomen blood vessel | 1.43e-08 | 2 |
sinusoid | 1.43e-08 | 2 |
abdominal segment blood vessel | 1.43e-08 | 2 |
blood | 2.17e-08 | 15 |
haemolymphatic fluid | 2.17e-08 | 15 |
organism substance | 2.17e-08 | 15 |
intraembryonic coelom | 2.62e-07 | 12 |
blood vessel endothelium | 2.70e-07 | 18 |
endothelium | 2.70e-07 | 18 |
cardiovascular system endothelium | 2.70e-07 | 18 |
endothelial tube | 3.90e-07 | 9 |
arterial system endothelium | 3.90e-07 | 9 |
endothelium of artery | 3.90e-07 | 9 |
cardiovascular system | 7.24e-07 | 109 |