FFCP PHASE1:Hg19::chr7:34082286..34082306,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:34082286..34082306,+ to FFCP PHASE1:Hg19::chr7:34082286..34082306,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=168667 | |EntrezGene=168667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24154 | |HGNC=24154 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000494786_5end | |||
|cluster_id=chr7:34082286..34082306,+ | |||
|description=CAGE_peak_5_at_BMPER_5end | |||
|id=chr7:34082286..34082306,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.15e-32!180;CL:0000359!1.24e-31!32;CL:0000192!1.23e-23!42;CL:0000514!1.23e-23!42;CL:0000057!4.16e-23!75;CL:0002620!1.05e-21!23;CL:0000187!1.28e-17!54;CL:0000680!2.16e-17!57;CL:0000056!2.16e-17!57;CL:0000355!2.16e-17!57;CL:0002539!1.64e-16!10;CL:0000183!2.33e-15!59;CL:0000393!5.92e-15!60;CL:0000211!5.92e-15!60;CL:0000222!2.53e-14!119;CL:0000048!6.74e-13!430;CL:0000723!2.33e-12!436;CL:0000034!1.15e-11!444;CL:0000144!1.09e-09!625;CL:0000077!3.63e-09!19;CL:0000548!2.35e-07!679;CL:0000004!2.35e-07!679;CL:0000255!2.35e-07!679;CL:0000012!3.49e-07!682;CL:0002594!4.70e-07!4;CL:0002334!6.27e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.13e-25;32!CL:0002539;1.65e-21;10!CL:0002620;1.68e-19;23!CL:0000192;9.01e-15;43!CL:0002573;4.94e-10;2!CL:0002596;1.60e-07;2!CL:0000077;1.72e-07;19!CL:0000187;1.93e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.44e-27,32;CL:0002539,1.08e-21,10;CL:0002620,2.34e-19,23;CL:0000192,4.16e-19,43;CL:0000514,4.16e-19,43;CL:0000187,5.29e-14,55;CL:0000680,4.62e-13,58;CL:0000056,4.62e-13,58;CL:0000355,4.62e-13,58;CL:0000222,2.53e-12,121;CL:0000393,3.25e-12,61;CL:0000211,3.25e-12,61;CL:0000057,3.36e-10,76;CL:0002573,5.92e-10,2;CL:0002596,1.35e-07,2;CL:0000077,1.51e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;9.01e-15;43!CL:0000355;2.02e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.71e-10!14;DOID:17!1.54e-09!5;DOID:450!1.54e-09!5;DOID:66!1.54e-09!5;DOID:423!1.54e-09!5;DOID:0080000!1.54e-09!5;DOID:11722!1.54e-09!5;DOID:0060072!2.96e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:17;7.10e-18;5!DOID:450;7.10e-18;5!DOID:66;7.10e-18;5!DOID:423;7.10e-18;5!DOID:0080000;7.10e-18;5!DOID:11722;7.10e-18;5!DOID:0060084;1.40e-10;3!DOID:127;1.40e-10;3!DOID:0060072;4.88e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.78e-18,5;DOID:450,7.78e-18,5;DOID:66,7.78e-18,5;DOID:423,7.78e-18,5;DOID:0080000,7.78e-18,5;DOID:11722,7.78e-18,5;DOID:0060084,8.53e-11,3;DOID:127,8.53e-11,3;DOID:0060072,3.38e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.37e-24!42;UBERON:0003509!6.37e-24!42;UBERON:0004572!6.37e-24!42;UBERON:0004573!4.17e-21!33;UBERON:0004571!4.17e-21!33;UBERON:0001981!5.70e-21!60;UBERON:0007500!5.70e-21!60;UBERON:0004537!5.70e-21!60;UBERON:0006965!5.70e-21!60;UBERON:0004872!2.88e-19!84;UBERON:0004290!5.11e-18!70;UBERON:0000055!7.32e-17!69;UBERON:0004237!1.64e-16!10;UBERON:0004695!1.64e-16!10;UBERON:0002111!1.64e-16!10;UBERON:0004178!1.64e-16!10;UBERON:0002199!8.91e-16!45;UBERON:0002416!8.91e-16!45;UBERON:0001134!1.22e-15!61;UBERON:0002036!1.22e-15!61;UBERON:0003082!1.22e-15!61;UBERON:0002049!2.14e-15!79;UBERON:0007798!2.14e-15!79;UBERON:0002385!7.46e-15!63;UBERON:0001015!7.46e-15!63;UBERON:0000383!7.46e-15!63;UBERON:0000914!1.71e-14!83;UBERON:0002329!1.71e-14!83;UBERON:0003077!1.71e-14!83;UBERON:0003059!1.71e-14!83;UBERON:0007282!1.71e-14!83;UBERON:0009618!1.71e-14!83;UBERON:0007285!1.71e-14!83;UBERON:0002097!4.51e-14!40;UBERON:0000486!7.62e-14!82;UBERON:0000947!6.95e-13!21;UBERON:0010191!6.95e-13!21;UBERON:0004535!1.46e-12!110;UBERON:0001009!6.32e-12!113;UBERON:0003914!3.16e-11!118;UBERON:0001135!4.43e-10!15;UBERON:0005256!8.18e-08!143;UBERON:0003102!2.29e-07!95;UBERON:0001310!4.70e-07!4;UBERON:0002118!5.40e-07!5;UBERON:0004532!5.40e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.65e-21;10!UBERON:0004695;1.65e-21;10!UBERON:0002111;1.65e-21;10!UBERON:0004178;1.65e-21;10!UBERON:0004573;8.88e-16;33!UBERON:0004571;8.88e-16;33!UBERON:0001135;7.49e-14;15!UBERON:0000947;4.04e-12;21!UBERON:0010191;4.04e-12;21!UBERON:0001637;1.46e-10;42!UBERON:0003509;1.46e-10;42!UBERON:0004572;1.46e-10;42!UBERON:0007500;1.15e-09;56!UBERON:0001981;1.15e-09;56!UBERON:0004537;1.15e-09;56!UBERON:0002097;3.21e-09;41!UBERON:0002199;4.26e-08;46!UBERON:0002416;4.26e-08;46!UBERON:0005396;1.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.08e-21,10;UBERON:0004695,1.08e-21,10;UBERON:0002111,1.08e-21,10;UBERON:0004178,1.08e-21,10;UBERON:0001637,7.63e-20,42;UBERON:0003509,7.63e-20,42;UBERON:0004572,7.63e-20,42;UBERON:0004573,1.48e-17,33;UBERON:0004571,1.48e-17,33;UBERON:0007500,2.24e-16,59;UBERON:0001981,2.24e-16,59;UBERON:0004537,2.24e-16,59;UBERON:0006965,2.24e-16,59;UBERON:0001135,5.69e-14,15;UBERON:0000055,1.42e-13,68;UBERON:0000947,3.26e-12,21;UBERON:0010191,3.26e-12,21;UBERON:0001134,5.97e-12,62;UBERON:0002036,5.97e-12,62;UBERON:0003082,5.97e-12,62;UBERON:0004872,1.53e-11,83;UBERON:0002385,1.90e-11,64;UBERON:0001015,1.90e-11,64;UBERON:0000383,1.90e-11,64;UBERON:0002199,2.28e-11,46;UBERON:0002416,2.28e-11,46;UBERON:0002097,2.47e-11,41;UBERON:0002049,3.12e-11,78;UBERON:0007798,3.12e-11,78;UBERON:0002329,3.17e-11,71;UBERON:0003059,3.17e-11,71;UBERON:0007282,3.17e-11,71;UBERON:0004290,3.17e-11,71;UBERON:0009618,3.17e-11,71;UBERON:0007503,3.54e-11,78;UBERON:0003077,5.22e-11,72;UBERON:0007285,5.22e-11,72;UBERON:0007524,8.47e-11,73;UBERON:0000486,5.51e-09,83;UBERON:0005256,6.42e-09,122;UBERON:0003914,1.09e-08,117;UBERON:0005396,1.35e-07,2;UBERON:0000490,3.68e-07,148;UBERON:0004535,8.75e-07,109 | |||
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| ||
|short_description=p5@BMPER | |||
}} | }} |
Latest revision as of 08:38, 18 September 2015
Short description: | p5@BMPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BMPER_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000494786_5end |
EntrezGene: | BMPER |
HGNC: | 24154 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.44e-27 | 32 |
aortic smooth muscle cell | 1.08e-21 | 10 |
skin fibroblast | 2.34e-19 | 23 |
smooth muscle cell | 4.16e-19 | 43 |
smooth muscle myoblast | 4.16e-19 | 43 |
muscle cell | 5.29e-14 | 55 |
muscle precursor cell | 4.62e-13 | 58 |
myoblast | 4.62e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.62e-13 | 58 |
mesodermal cell | 2.53e-12 | 121 |
electrically responsive cell | 3.25e-12 | 61 |
electrically active cell | 3.25e-12 | 61 |
fibroblast | 3.36e-10 | 76 |
Schwann cell | 5.92e-10 | 2 |
smooth muscle cell of the carotid artery | 1.35e-07 | 2 |
mesothelial cell | 1.51e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.78e-18 | 5 |
myotonic disease | 7.78e-18 | 5 |
muscle tissue disease | 7.78e-18 | 5 |
myopathy | 7.78e-18 | 5 |
muscular disease | 7.78e-18 | 5 |
myotonic dystrophy | 7.78e-18 | 5 |
cell type benign neoplasm | 8.53e-11 | 3 |
leiomyoma | 8.53e-11 | 3 |
benign neoplasm | 3.38e-08 | 4 |