FFCP PHASE1:Hg19::chr12:44229846..44229916,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84216 | |EntrezGene=84216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25308 | |HGNC=25308 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0C3,F8VS00 | |UniProt=Q9H0C3,F8VS00 | ||
|association_with_transcript=0bp_to_ENST00000266534,ENST00000551577_5end | |association_with_transcript=0bp_to_ENST00000266534,ENST00000551577_5end | ||
|cluster_id=chr12:44229846..44229916,+ | |||
|description=CAGE_peak_1_at_TMEM117_5end | |description=CAGE_peak_1_at_TMEM117_5end | ||
|id=chr12:44229846..44229916,+ | |id=chr12:44229846..44229916,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-18!115;UBERON:0002780!7.21e-11!41;UBERON:0001890!7.21e-11!41;UBERON:0006240!7.21e-11!41;UBERON:0003080!8.06e-11!42;UBERON:0001049!5.63e-10!57;UBERON:0005068!5.63e-10!57;UBERON:0006241!5.63e-10!57;UBERON:0007135!5.63e-10!57;UBERON:0001893!3.07e-09!34;UBERON:0002791!6.55e-09!33;UBERON:0002020!6.87e-09!34;UBERON:0003528!6.87e-09!34;UBERON:0001869!7.55e-09!32;UBERON:0002616!8.31e-09!59;UBERON:0002619!1.09e-07!22;UBERON:0000956!1.76e-07!25;UBERON:0000203!1.76e-07!25;UBERON:0001950!3.64e-07!20;UBERON:0002346!4.55e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!2.20e-18!115;UBERON:0002780!7.21e-11!41;UBERON:0001890!7.21e-11!41;UBERON:0006240!7.21e-11!41;UBERON:0003080!8.06e-11!42;UBERON:0001049!5.63e-10!57;UBERON:0005068!5.63e-10!57;UBERON:0006241!5.63e-10!57;UBERON:0007135!5.63e-10!57;UBERON:0001893!3.07e-09!34;UBERON:0002791!6.55e-09!33;UBERON:0002020!6.87e-09!34;UBERON:0003528!6.87e-09!34;UBERON:0001869!7.55e-09!32;UBERON:0002616!8.31e-09!59;UBERON:0002619!1.09e-07!22;UBERON:0000956!1.76e-07!25;UBERON:0000203!1.76e-07!25;UBERON:0001950!3.64e-07!20;UBERON:0002346!4.55e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.06e-08;41!UBERON:0001890;4.06e-08;41!UBERON:0001869;6.68e-08;32!UBERON:0002791;7.35e-08;32!UBERON:0001893;1.39e-07;34!UBERON:0002619;1.58e-07;22!UBERON:0003528;2.05e-07;34!UBERON:0002020;2.05e-07;34!UBERON:0000956;2.60e-07;25!UBERON:0000203;2.60e-07;25!UBERON:0005409;3.19e-07;22!UBERON:0001950;5.39e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0002780;4.06e-08;41!UBERON:0001890;4.06e-08;41!UBERON:0001869;6.68e-08;32!UBERON:0002791;7.35e-08;32!UBERON:0001893;1.39e-07;34!UBERON:0002619;1.58e-07;22!UBERON:0003528;2.05e-07;34!UBERON:0002020;2.05e-07;34!UBERON:0000956;2.60e-07;25!UBERON:0000203;2.60e-07;25!UBERON:0005409;3.19e-07;22!UBERON:0001950;5.39e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.86e-18,114;UBERON:0002780,6.67e-11,41;UBERON:0001890,6.67e-11,41;UBERON:0003080,6.67e-11,41;UBERON:0006240,6.67e-11,41;UBERON:0001049,5.07e-10,56;UBERON:0005068,5.07e-10,56;UBERON:0006241,5.07e-10,56;UBERON:0007135,5.07e-10,56;UBERON:0001893,2.88e-09,34;UBERON:0000073,4.96e-09,53;UBERON:0002616,4.96e-09,53;UBERON:0003528,6.46e-09,34;UBERON:0002020,6.46e-09,34;UBERON:0001869,7.10e-09,32;UBERON:0002791,7.64e-09,32;UBERON:0002346,5.48e-08,86;UBERON:0002619,1.04e-07,22;UBERON:0000956,1.67e-07,25;UBERON:0000203,1.67e-07,25;UBERON:0005409,2.98e-07,25;UBERON:0001950,3.47e-07,20;UBERON:0003075,5.55e-07,82;UBERON:0007284,5.55e-07,82 | |||
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| ||
|short_description=p1@TMEM117 | |short_description=p1@TMEM117 | ||
}} | }} |
Latest revision as of 09:01, 18 September 2015
Short description: | p1@TMEM117 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM117_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000266534, ENST00000551577_5end |
EntrezGene: | TMEM117 |
HGNC: | 25308 |
UniProt: | Q9H0C3F8VS00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.86e-18 | 114 |
regional part of forebrain | 6.67e-11 | 41 |
forebrain | 6.67e-11 | 41 |
anterior neural tube | 6.67e-11 | 41 |
future forebrain | 6.67e-11 | 41 |
neural tube | 5.07e-10 | 56 |
neural rod | 5.07e-10 | 56 |
future spinal cord | 5.07e-10 | 56 |
neural keel | 5.07e-10 | 56 |
telencephalon | 2.88e-09 | 34 |
regional part of nervous system | 4.96e-09 | 53 |
regional part of brain | 4.96e-09 | 53 |
brain grey matter | 6.46e-09 | 34 |
gray matter | 6.46e-09 | 34 |
cerebral hemisphere | 7.10e-09 | 32 |
regional part of telencephalon | 7.64e-09 | 32 |
neurectoderm | 5.48e-08 | 86 |
regional part of cerebral cortex | 1.04e-07 | 22 |
cerebral cortex | 1.67e-07 | 25 |
pallium | 1.67e-07 | 25 |
gastrointestinal system | 2.98e-07 | 25 |
neocortex | 3.47e-07 | 20 |
neural plate | 5.55e-07 | 82 |
presumptive neural plate | 5.55e-07 | 82 |