FFCP PHASE1:Hg19::chr7:35293665..35293680,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57057 | |EntrezGene=57057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11598 | |HGNC=11598 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMR3 | |UniProt=Q9UMR3 | ||
|association_with_transcript=30bp_to_NM_001077653,NM_001166220_5end | |association_with_transcript=30bp_to_NM_001077653,NM_001166220_5end | ||
|cluster_id=chr7:35293665..35293680,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_2_at_TBX20_5end | |description=CAGE_peak_2_at_TBX20_5end | ||
|id=chr7:35293665..35293680,- | |id=chr7:35293665..35293680,- | ||
|ontology_enrichment_celltype=CL:0002494!2.60e-13!16;CL:0000222!5.36e-08!119;CL:0002548!1.53e-07!6;CL:0000187!8.03e-07!54;CL:0000077!9.45e-07!19 | |ontology_enrichment_celltype=CL:0002494!2.60e-13!16;CL:0000222!5.36e-08!119;CL:0002548!1.53e-07!6;CL:0000187!8.03e-07!54;CL:0000077!9.45e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002548;1.31e-11;6!CL:0002494;6.38e-08;16!CL:0002569;8.62e-08;6!CL:0002195;3.40e-07;2!CL:0002571;3.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,1.27e-11,6;CL:0002494,5.81e-08,16;CL:0002569,1.02e-07,6;CL:0002195,2.62e-07,2;CL:0002571,2.62e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;7.42e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.44e-23!27;UBERON:0001009!2.06e-20!113;UBERON:0000948!9.19e-20!24;UBERON:0005498!9.19e-20!24;UBERON:0004140!9.19e-20!24;UBERON:0009881!9.19e-20!24;UBERON:0004141!9.19e-20!24;UBERON:0003084!9.19e-20!24;UBERON:0007005!9.19e-20!24;UBERON:0004139!9.19e-20!24;UBERON:0004291!9.19e-20!24;UBERON:0004872!3.69e-19!84;UBERON:0004535!3.25e-18!110;UBERON:0003914!9.56e-16!118;UBERON:0001981!2.77e-10!60;UBERON:0007500!2.77e-10!60;UBERON:0004537!2.77e-10!60;UBERON:0006965!2.77e-10!60;UBERON:0002049!9.92e-10!79;UBERON:0007798!9.92e-10!79;UBERON:0001637!1.33e-09!42;UBERON:0003509!1.33e-09!42;UBERON:0004572!1.33e-09!42;UBERON:0000947!6.18e-09!21;UBERON:0010191!6.18e-09!21;UBERON:0003103!6.50e-09!69;UBERON:0000055!2.69e-08!69;UBERON:0004573!3.89e-07!33;UBERON:0004571!3.89e-07!33;UBERON:0002331!9.22e-07!10;UBERON:0000358!9.22e-07!10;UBERON:0000307!9.22e-07!10;UBERON:0000091!9.22e-07!10;UBERON:0000087!9.22e-07!10;UBERON:0007806!9.22e-07!10;UBERON:0008780!9.22e-07!10;UBERON:0005728!9.22e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.45e-23;25!UBERON:0000948;3.22e-17;22!UBERON:0003422;8.62e-08;6!UBERON:0002331;8.11e-07;10!UBERON:0001009;8.42e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.45e-24,27;UBERON:0000948,2.78e-18,24;UBERON:0005498,2.78e-18,24;UBERON:0004140,2.78e-18,24;UBERON:0009881,2.78e-18,24;UBERON:0004141,2.78e-18,24;UBERON:0003084,2.78e-18,24;UBERON:0007005,2.78e-18,24;UBERON:0004139,2.78e-18,24;UBERON:0004291,2.78e-18,24;UBERON:0001009,7.47e-18,112;UBERON:0004872,1.46e-16,83;UBERON:0004535,1.72e-14,109;UBERON:0003914,2.54e-14,117;UBERON:0003103,1.96e-08,68;UBERON:0003422,1.02e-07,6;UBERON:0000025,1.19e-07,192;UBERON:0003104,1.82e-07,160;UBERON:0009142,1.82e-07,160;UBERON:0002049,2.42e-07,78;UBERON:0007798,2.42e-07,78;UBERON:0007500,2.65e-07,59;UBERON:0001981,2.65e-07,59;UBERON:0004537,2.65e-07,59;UBERON:0006965,2.65e-07,59;UBERON:0004111,7.79e-07,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,4.87613732627923,0.670700859703636,2.81297636055767,0,0,0,0,0,1.79616152611729,2.21729397462564,0.966182642624386,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,1.04142150482278,2.82653970962005,2.09749718104953,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0.794455084879313,1.72101972449288,0.354668382198357,2.24271040056923,1.06748995729705,0.74000264525148,2.8008993185979,1.61652806483626,1.63461903113459,0,0,0,0.312160076830321,1.1409436430889,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58805056424029,0.179389635688862,0.427114777637135,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0.643240938192885,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,1.77236972004421,0,0.245976877086227,0.514703430895577,0,0,0,0,0,0,0,1.27523445472584,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,2.85955987316295,1.08524321078289,0,0,3.909311436168,1.58390374586686,0,0,0,0,0,0,2.39624855491583,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55776328755086,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,1.37354197227515,1.32015199872941,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,2.32422774648643,1.5740617341532,0,0.616067160352178,0.532306030317022,3.47973196830029,0,0.429374660225974,0.372158369359667,0,1.33441135746677,0,1.28381696410176,0.318203247925937,0,0,0,0,0.202182481573316,0,0.842516912477962,0,0,0,0,1.1312434556297,0,0,0,0,0.578775534266688,0,1.01455188481352,0,0.845086807596724,2.15117028306077,1.17898849215745,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,1.27753871307098,0,0.307240764308458,0.447352215784832,0.667396566847634,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,1.53471711068062,2.56472854656027,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0.689486746482929,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0.54323685961004,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0.424059214301822,0.432777279484182,0,0,0,1.18608451472249,0.741383633679017,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0.518440956986236,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,1.70762395791482,0.39961921916426,0,0,0,0,0.621262677827163,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,7.26134243307861,6.41649187232714,0.717873024576814,1.19807400299395,4.29226048136571,2.90122894674434,9.2041357306815,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71756261098694,4.63464379255802,0,0,0,0,0,0.574647645245373,0.681552087141687,0.339936274560377,0,0,0.258565912723101,0,0.513260513652988,0,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0.686520205190771,0.302461847526478,0.621748802331122,0.73927574994817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31143796488764,0.214441591374926,0.260994291965212,2.04035332961045,0.463044948647668,0.489473409012935,0.537266523244462,0.308801447160972,1.75427239662966,0.353378291891762,0,0.506827321959218,0,3.79973375904318,4.55789934266073,0,0,0,0,0.655219697692825,0,0,0.999936979274649,0,0,0,0,0,0,0.255788742607303,1.07824811396682,0.314531883711793,1.74735421107222,0.848662649770126,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0.795664888465099,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,1.06442844195167,0.115233987555779,0,0,0,0.236387681767936,0,1.72684804271131,0,0,0,0,0,0.428859265059938,0.47404083519818,0,0.521574816907738,0,0,0,0,0,0.709992004383392,1.53384128566484,0,0.9164274741762,0,0,0.335566295393377,1.76670420507437,0,0,0,0,0.485710993059139,0,0,0,0,1.20934568419972,0,0.0771741581079447,0,0.470317296361523,3.67722482630858,0,0,0,0,0,0,0,0,1.78553938605658,0,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,1.64708051314868,0.203977659483963,0.26721740526556,1.47031839255752,0.250707539292375,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99727032255654,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,4.87613732627923,0.670700859703636,2.81297636055767,0,0,0,0,0,1.79616152611729,2.21729397462564,0.966182642624386,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,1.04142150482278,2.82653970962005,2.09749718104953,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0.794455084879313,1.72101972449288,0.354668382198357,2.24271040056923,1.06748995729705,0.74000264525148,2.8008993185979,1.61652806483626,1.63461903113459,0,0,0,0.312160076830321,1.1409436430889,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58805056424029,0.179389635688862,0.427114777637135,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0.643240938192885,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,1.77236972004421,0,0.245976877086227,0.514703430895577,0,0,0,0,0,0,0,1.27523445472584,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,2.85955987316295,1.08524321078289,0,0,3.909311436168,1.58390374586686,0,0,0,0,0,0,2.39624855491583,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55776328755086,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,1.37354197227515,1.32015199872941,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,2.32422774648643,1.5740617341532,0,0.616067160352178,0.532306030317022,3.47973196830029,0,0.429374660225974,0.372158369359667,0,1.33441135746677,0,1.28381696410176,0.318203247925937,0,0,0,0,0.202182481573316,0,0.842516912477962,0,0,0,0,1.1312434556297,0,0,0,0,0.578775534266688,0,1.01455188481352,0,0.845086807596724,2.15117028306077,1.17898849215745,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,1.27753871307098,0,0.307240764308458,0.447352215784832,0.667396566847634,0,0,0,0,0,0,0,0,0,0.891547074219827,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,1.53471711068062,2.56472854656027,0,0,0,0,0,0,0,0,0,0,1.18193840883968,0.689486746482929,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.628303510868405,0.54323685961004,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0,0,0,0.424059214301822,0.432777279484182,0,0,0,1.18608451472249,0.741383633679017,0.626531697032732,0,0,0,0,0,0,0,0,0,0,0,0.518440956986236,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,1.70762395791482,0.39961921916426,0,0,0,0,0.621262677827163,0,0,0,0,0,0,0,0,0.429765441419957,0.262887354279314,7.26134243307861,6.41649187232714,0.717873024576814,1.19807400299395,4.29226048136571,2.90122894674434,9.2041357306815,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71756261098694,4.63464379255802,0,0,0,0,0,0.574647645245373,0.681552087141687,0.339936274560377,0,0,0.258565912723101,0,0.513260513652988,0,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.553394539744923,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0.686520205190771,0.302461847526478,0.621748802331122,0.73927574994817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31143796488764,0.214441591374926,0.260994291965212,2.04035332961045,0.463044948647668,0.489473409012935,0.537266523244462,0.308801447160972,1.75427239662966,0.353378291891762,0,0.506827321959218,0,3.79973375904318,4.55789934266073,0,0,0,0,0.655219697692825,0,0,0.999936979274649,0,0,0,0,0,0,0.255788742607303,1.07824811396682,0.314531883711793,1.74735421107222,0.848662649770126,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0.795664888465099,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0,1.06442844195167,0.115233987555779,0,0,0,0.236387681767936,0,1.72684804271131,0,0,0,0,0,0.428859265059938,0.47404083519818,0,0.521574816907738,0,0,0,0,0,0.709992004383392,1.53384128566484,0,0.9164274741762,0,0,0.335566295393377,1.76670420507437,0,0,0,0,0.485710993059139,0,0,0,0,1.20934568419972,0,0.0771741581079447,0,0.470317296361523,3.67722482630858,0,0,0,0,0,0,0,0,1.78553938605658,0,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,1.64708051314868,0.203977659483963,0.26721740526556,1.47031839255752,0.250707539292375,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99727032255654,0,0 | ||
|short_description=p2@TBX20 | |short_description=p2@TBX20 | ||
}} | }} |
Latest revision as of 09:07, 18 September 2015
Short description: | p2@TBX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBX20_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 30bp_to_NM_001077653, NM_001166220_5end |
EntrezGene: | TBX20 |
HGNC: | 11598 |
UniProt: | Q9UMR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 1.27e-11 | 6 |
cardiocyte | 5.81e-08 | 16 |
mesenchymal stem cell of umbilical cord | 1.02e-07 | 6 |
hepatic stem cell | 2.62e-07 | 2 |
hepatic mesenchymal stem cell | 2.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.45e-24 | 27 |
heart | 2.78e-18 | 24 |
primitive heart tube | 2.78e-18 | 24 |
primary heart field | 2.78e-18 | 24 |
anterior lateral plate mesoderm | 2.78e-18 | 24 |
heart tube | 2.78e-18 | 24 |
heart primordium | 2.78e-18 | 24 |
cardiac mesoderm | 2.78e-18 | 24 |
cardiogenic plate | 2.78e-18 | 24 |
heart rudiment | 2.78e-18 | 24 |
circulatory system | 7.47e-18 | 112 |
splanchnic layer of lateral plate mesoderm | 1.46e-16 | 83 |
cardiovascular system | 1.72e-14 | 109 |
epithelial tube | 2.54e-14 | 117 |
compound organ | 1.96e-08 | 68 |
mesenchyme of umbilical cord | 1.02e-07 | 6 |
tube | 1.19e-07 | 192 |
mesenchyme | 1.82e-07 | 160 |
entire embryonic mesenchyme | 1.82e-07 | 160 |
vasculature | 2.42e-07 | 78 |
vascular system | 2.42e-07 | 78 |
epithelial tube open at both ends | 2.65e-07 | 59 |
blood vessel | 2.65e-07 | 59 |
blood vasculature | 2.65e-07 | 59 |
vascular cord | 2.65e-07 | 59 |
anatomical conduit | 7.79e-07 | 240 |