FFCP PHASE1:Hg19::chr8:49833948..49833973,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6591 | |EntrezGene=6591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11094 | |HGNC=11094 | ||
|TSSclassifier=strong | |||
|UniProt=O43623 | |UniProt=O43623 | ||
|association_with_transcript=14bp_to_ENST00000020945,uc003xqp.2_5end | |association_with_transcript=14bp_to_ENST00000020945,uc003xqp.2_5end | ||
|cluster_id=chr8:49833948..49833973,- | |||
|coexpression_cluster_id=C4759 | |||
|description=CAGE_peak_2_at_SNAI2_5end | |description=CAGE_peak_2_at_SNAI2_5end | ||
|id=chr8:49833948..49833973,- | |id=chr8:49833948..49833973,- | ||
|ontology_enrichment_celltype=CL:0000055!1.44e-32!180;CL:0000057!6.06e-16!75;CL:0000220!5.84e-14!246;CL:0002321!1.11e-13!248;CL:0000680!1.42e-11!57;CL:0000056!1.42e-11!57;CL:0000355!1.42e-11!57;CL:0000183!5.64e-11!59;CL:0000187!2.44e-10!54;CL:0000393!1.96e-08!60;CL:0000211!1.96e-08!60;CL:0000221!3.24e-08!71;CL:0002371!1.30e-07!591;CL:0002077!2.36e-07!33 | |ontology_enrichment_celltype=CL:0000055!1.44e-32!180;CL:0000057!6.06e-16!75;CL:0000220!5.84e-14!246;CL:0002321!1.11e-13!248;CL:0000680!1.42e-11!57;CL:0000056!1.42e-11!57;CL:0000355!1.42e-11!57;CL:0000183!5.64e-11!59;CL:0000187!2.44e-10!54;CL:0000393!1.96e-08!60;CL:0000211!1.96e-08!60;CL:0000221!3.24e-08!71;CL:0002371!1.30e-07!591;CL:0002077!2.36e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000134;8.67e-09;55!CL:0000723;1.40e-08;61!CL:0000048;4.33e-08;58!CL:0002077;1.74e-07;34!CL:0000349;1.81e-07;19!CL:0002320;3.85e-07;188!CL:0000187;4.03e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.21e-16,76;CL:0002321,1.76e-12,250;CL:0000680,1.86e-12,58;CL:0000056,1.86e-12,58;CL:0000355,1.86e-12,58;CL:0000187,3.65e-11,55;CL:0000393,7.39e-09,61;CL:0000211,7.39e-09,61;CL:0000221,3.42e-08,72;CL:0002077,3.60e-08,34;CL:0000349,1.85e-07,19;CL:0000192,8.32e-07,43;CL:0000514,8.32e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000355;1.97e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.77e-18!82;UBERON:0000475!1.14e-17!365;UBERON:0000914!7.43e-17!83;UBERON:0002329!7.43e-17!83;UBERON:0003077!7.43e-17!83;UBERON:0003059!7.43e-17!83;UBERON:0007282!7.43e-17!83;UBERON:0009618!7.43e-17!83;UBERON:0007285!7.43e-17!83;UBERON:0003102!9.76e-17!95;UBERON:0004290!1.15e-13!70;UBERON:0002100!3.14e-12!216;UBERON:0005256!6.24e-12!143;UBERON:0000481!8.39e-12!347;UBERON:0000468!1.76e-11!659;UBERON:0002199!2.86e-11!45;UBERON:0002416!2.86e-11!45;UBERON:0001134!3.56e-11!61;UBERON:0002036!3.56e-11!61;UBERON:0003082!3.56e-11!61;UBERON:0002385!7.43e-11!63;UBERON:0001015!7.43e-11!63;UBERON:0000383!7.43e-11!63;UBERON:0003104!1.84e-10!238;UBERON:0009142!1.84e-10!238;UBERON:0002097!6.08e-10!40;UBERON:0004923!8.73e-09!57;UBERON:0000467!1.17e-08!625;UBERON:0000480!1.92e-08!626;UBERON:0002050!5.31e-07!605;UBERON:0005423!5.31e-07!605;UBERON:0000922!5.99e-07!612;UBERON:0000923!9.31e-07!604;UBERON:0005291!9.31e-07!604;UBERON:0006598!9.31e-07!604;UBERON:0002532!9.31e-07!604;UBERON:0000119!9.92e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.31e-08;41!UBERON:0002199;2.10e-08;46!UBERON:0002416;2.10e-08;46!UBERON:0003102;2.14e-08;50!UBERON:0004923;2.93e-07;55!UBERON:0002385;2.93e-07;31!UBERON:0001015;2.93e-07;31!UBERON:0000383;2.93e-07;31!UBERON:0002204;3.00e-07;70!UBERON:0002384;4.93e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.70e-19,83;UBERON:0003102,4.21e-19,99;UBERON:0002329,1.27e-14,71;UBERON:0003059,1.27e-14,71;UBERON:0007282,1.27e-14,71;UBERON:0004290,1.27e-14,71;UBERON:0009618,1.27e-14,71;UBERON:0007524,1.49e-14,73;UBERON:0007503,2.48e-14,78;UBERON:0003077,5.18e-14,72;UBERON:0007285,5.18e-14,72;UBERON:0002199,2.89e-12,46;UBERON:0002416,2.89e-12,46;UBERON:0001134,5.01e-12,62;UBERON:0002036,5.01e-12,62;UBERON:0003082,5.01e-12,62;UBERON:0002385,1.10e-11,64;UBERON:0001015,1.10e-11,64;UBERON:0000383,1.10e-11,64;UBERON:0004923,4.78e-11,66;UBERON:0002097,6.96e-11,41;UBERON:0005256,1.27e-10,122;UBERON:0003104,5.16e-10,160;UBERON:0009142,5.16e-10,160;UBERON:0002100,2.47e-09,199;UBERON:0004119,1.36e-07,160;UBERON:0000925,1.36e-07,160;UBERON:0006595,1.36e-07,160 | |||
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|phase1_expression=78.666738224151,50.0995225904901,81.4716455674713,47.0344502259713,88.0513356021757,36.6382180122155,30.3959853801973,34.1128731650489,37.0883592043771,18.4300452376132,27.2142455509247,178.685042402481,179.09777821712,39.2339338883348,57.3317460009294,25.5483555651675,28.3266428171269,21.1789926212338,20.4931775492013,41.9842808041847,46.1041562212012,18.4938285672072,5.72471974262113,3.83248390204076,9.29015533001541,0,0,0,0,0,2.32224184974114,55.1652734687356,72.5906264255583,45.4797432505149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.5136479153508,34.2057438448854,30.4312897187602,54.5773120100695,63.669914650758,37.804941448775,41.3548692466572,56.9362798254084,14.2747573917742,23.5033161310318,11.6820264971858,3.66741411393595,37.8867099824244,23.7302043382035,0,0.174129737299267,0,0,0,0,0,5.16140757063675,0,0,0,0,0,0.516833518338658,2.49036383880697,1.67360306382335,5.23678112241891,0.760272105718513,7.80998584154142,0,0,0.267899184852239,0,0.112611480483322,0,0,0.549605231791222,0,0,42.7372171099684,55.1638866381804,13.54946474811,27.0114728858966,13.4813211751942,18.4427558743146,20.1843936051231,11.7423895302675,15.5400555502811,88.3839340535336,30.0404798715404,24.5192854670188,69.6244167166684,60.4984720703999,29.2901789792246,56.500973906288,19.3960419325113,44.6851554849885,24.8961137124782,29.9464947081043,25.2811452064047,18.5780295841953,8.72123652913553,70.8814858865751,16.6320400019487,20.7704220593988,134.703881566828,78.32937745797,11.6151918628306,14.138392745532,31.862373280681,39.9469635001563,19.9217067269363,17.2773767742586,14.9730481771228,19.553470290086,35.4505265438822,37.9358103075616,22.2067411102458,31.4310214177239,13.1396675423271,30.1509307257176,19.9156072044694,55.8314039573668,21.2044370365056,39.3053067202618,26.8332454319228,33.7259112890784,36.1700032637229,25.2645282542627,74.7919501741959,87.2787585890671,82.8865280674221,0.853815942907168,0.795178609928912,3.36962434321603,3.00617059544574,1.51392510525377,0,40.6768784057521,35.3782516006087,58.0166669680418,75.6919722692126,125.607029810508,6.98010120235079,7.08055698328027,6.26628677697053,6.61763836394364,5.66486554640256,4.74541238222193,4.58426447744559,3.72820783738158,5.00171304030308,13.2867981832437,33.658025712827,49.8004553710994,29.4017422771084,5.07020139287323,0,4.13552934676983,0,0,14.7548316856732,98.2265054407199,33.7205259772859,52.0740077092248,58.7936626756663,10.1000574646201,31.1980435583874,4.3299402607582,6.60803308357938,23.716556235636,0.866198686566443,2.31492756288305,0.570762456703795,0,0,0,0,0,87.1724656077026,80.4634394072537,77.1256528998582,76.4829783882324,46.7920641007479,36.8047371998603,0,0,0.414656231081544,0.432359860250884,0,41.1466355013255,57.6802522592999,31.6487107467127,17.1072446022705,25.0899082196109,31.5360210736113,68.0266909660776,63.9147180768556,31.3891249559962,37.9158937694312,31.41302692914,153.792271716309,49.027559648248,23.6684923760535,43.6831235027738,60.7009403258655,42.5547396069835,49.0216809389623,20.302875099457,123.175104423858,60.0965445849961,43.6486486953605,15.2818537959295,16.630989331602,20.4978776400519,24.4029368408082,14.2961377390342,0,0,0,35.2248537572627,17.2292903751171,119.815000234203,60.9529301070508,37.6021670267202,88.2770548772685,0,0,0,0,9.90969034467607,9.10978977003352,2.31986643833309,1.67516265334349,1.91381625495949,0,0,0,57.6650011079957,43.0146648111322,30.9242127017699,34.7311338756448,34.2583658490551,29.1749467812779,15.4626667790381,24.3766340779452,15.9185252839189,34.1461135265266,37.1966335179844,37.242572045424,19.0275115685101,100.05439146346,76.17784008601,0,0,0,95.4851850055717,209.708653783226,185.667640104424,80.8831453489213,31.1527805774767,51.9221174701186,82.6497512699271,46.56535966507,53.5643557408213,40.0728779401476,32.8466647799656,37.8206474916961,40.5708150708217,52.4446973475457,42.881629651725,0.120859449591622,58.7483957988625,19.4290886654741,10.3333003348146,11.2896524164165,17.4395471896034,4.51199612907412,0.924184045252977,1.56869953835371,0,1.47772280450026,5.68666920354483,1.02056223165909,13.1708708822305,9.25363516141736,11.6506968143857,9.53210570324221,0.764628819135115,2.49322802678617,2.46262230194396,0,0,0.769350375349168,3.93617574839647,3.57916234130733,4.94596855909067,9.24851594665268,5.77566499444116,136.675198043089,84.5078319847478,6.42735719376638,49.3020663289822,43.9038558776736,51.4237310332534,36.5266917084006,83.7877909972534,75.4086808353988,43.8064864918759,34.2773337239939,51.8994634233471,111.662429139127,69.9317664470321,34.393645490887,31.1446518029181,26.4442371337738,5.5762981612848,13.2454439475718,12.2430386972915,16.5287268494264,13.1580195563783,12.0224904863273,28.6561944406944,24.9939745527793,39.0791897543841,42.7349311489928,99.7097842119035,14.955552652519,10.98928096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| ||
|short_description=p2@SNAI2 | |short_description=p2@SNAI2 | ||
}} | }} |
Latest revision as of 10:32, 18 September 2015
Short description: | p2@SNAI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNAI2_5end |
Coexpression cluster: | C4759_Placental_Amniotic_Mesenchymal_bone_Myoblast_Sebocyte_glioma |
Association with transcript: | 14bp_to_ENST00000020945, uc003xqp.2_5end |
EntrezGene: | SNAI2 |
HGNC: | 11094 |
UniProt: | O43623 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.21e-16 | 76 |
embryonic cell | 1.76e-12 | 250 |
muscle precursor cell | 1.86e-12 | 58 |
myoblast | 1.86e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-12 | 58 |
muscle cell | 3.65e-11 | 55 |
electrically responsive cell | 7.39e-09 | 61 |
electrically active cell | 7.39e-09 | 61 |
ectodermal cell | 3.42e-08 | 72 |
ecto-epithelial cell | 3.60e-08 | 34 |
extraembryonic cell | 1.85e-07 | 19 |
smooth muscle cell | 8.32e-07 | 43 |
smooth muscle myoblast | 8.32e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.70e-19 | 83 |
surface structure | 4.21e-19 | 99 |
somite | 1.27e-14 | 71 |
presomitic mesoderm | 1.27e-14 | 71 |
presumptive segmental plate | 1.27e-14 | 71 |
dermomyotome | 1.27e-14 | 71 |
trunk paraxial mesoderm | 1.27e-14 | 71 |
dense mesenchyme tissue | 1.49e-14 | 73 |
epithelial vesicle | 2.48e-14 | 78 |
paraxial mesoderm | 5.18e-14 | 72 |
presumptive paraxial mesoderm | 5.18e-14 | 72 |
integument | 2.89e-12 | 46 |
integumental system | 2.89e-12 | 46 |
skeletal muscle tissue | 5.01e-12 | 62 |
striated muscle tissue | 5.01e-12 | 62 |
myotome | 5.01e-12 | 62 |
muscle tissue | 1.10e-11 | 64 |
musculature | 1.10e-11 | 64 |
musculature of body | 1.10e-11 | 64 |
organ component layer | 4.78e-11 | 66 |
skin of body | 6.96e-11 | 41 |
trunk mesenchyme | 1.27e-10 | 122 |
mesenchyme | 5.16e-10 | 160 |
entire embryonic mesenchyme | 5.16e-10 | 160 |
trunk | 2.47e-09 | 199 |
endoderm-derived structure | 1.36e-07 | 160 |
endoderm | 1.36e-07 | 160 |
presumptive endoderm | 1.36e-07 | 160 |