FFCP PHASE1:Hg19::chr1:167905325..167905336,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25874 | |EntrezGene=25874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24515 | |HGNC=24515 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=43bp_to_uc001ges.2_5end | |association_with_transcript=43bp_to_uc001ges.2_5end | ||
|cluster_id=chr1:167905325..167905336,- | |||
|description=CAGE_peak_2_at_BRP44_5end | |description=CAGE_peak_2_at_BRP44_5end | ||
|id=chr1:167905325..167905336,- | |id=chr1:167905325..167905336,- | ||
|ontology_enrichment_celltype=CL:0000037!5.06e-07!172;CL:0000566!5.06e-07!172;CL:0002032!7.86e-07!165;CL:0000837!7.86e-07!165;CL:0000988!8.98e-07!182 | |ontology_enrichment_celltype=CL:0000037!5.06e-07!172;CL:0000566!5.06e-07!172;CL:0002032!7.86e-07!165;CL:0000837!7.86e-07!165;CL:0000988!8.98e-07!182 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.45e-12!57;UBERON:0005068!1.45e-12!57;UBERON:0006241!1.45e-12!57;UBERON:0007135!1.45e-12!57;UBERON:0003080!2.23e-12!42;UBERON:0001017!3.62e-12!82;UBERON:0002780!4.82e-12!41;UBERON:0001890!4.82e-12!41;UBERON:0006240!4.82e-12!41;UBERON:0002619!7.81e-12!22;UBERON:0001950!1.16e-11!20;UBERON:0002616!1.23e-11!59;UBERON:0000955!2.84e-11!69;UBERON:0006238!2.84e-11!69;UBERON:0007023!4.29e-11!115;UBERON:0001869!5.70e-11!32;UBERON:0005743!8.89e-11!86;UBERON:0001893!8.94e-11!34;UBERON:0002020!2.57e-10!34;UBERON:0003528!2.57e-10!34;UBERON:0002791!3.01e-10!33;UBERON:0000073!3.08e-10!94;UBERON:0001016!3.08e-10!94;UBERON:0000956!5.57e-10!25;UBERON:0000203!5.57e-10!25 | |ontology_enrichment_uberon=UBERON:0001049!1.45e-12!57;UBERON:0005068!1.45e-12!57;UBERON:0006241!1.45e-12!57;UBERON:0007135!1.45e-12!57;UBERON:0003080!2.23e-12!42;UBERON:0001017!3.62e-12!82;UBERON:0002780!4.82e-12!41;UBERON:0001890!4.82e-12!41;UBERON:0006240!4.82e-12!41;UBERON:0002619!7.81e-12!22;UBERON:0001950!1.16e-11!20;UBERON:0002616!1.23e-11!59;UBERON:0000955!2.84e-11!69;UBERON:0006238!2.84e-11!69;UBERON:0007023!4.29e-11!115;UBERON:0001869!5.70e-11!32;UBERON:0005743!8.89e-11!86;UBERON:0001893!8.94e-11!34;UBERON:0002020!2.57e-10!34;UBERON:0003528!2.57e-10!34;UBERON:0002791!3.01e-10!33;UBERON:0000073!3.08e-10!94;UBERON:0001016!3.08e-10!94;UBERON:0000956!5.57e-10!25;UBERON:0000203!5.57e-10!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.14e-12;20!UBERON:0002619;2.56e-12;22!UBERON:0000956;1.30e-09;25!UBERON:0000203;1.30e-09;25!UBERON:0001869;2.48e-09;32!UBERON:0001893;1.12e-08;34!UBERON:0002791;2.14e-08;32!UBERON:0002780;3.50e-08;41!UBERON:0001890;3.50e-08;41!UBERON:0003528;4.62e-08;34!UBERON:0002020;4.62e-08;34!UBERON:0000073;3.89e-07;53!UBERON:0002616;3.89e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.98e-13,22;UBERON:0001950,3.13e-13,20;UBERON:0000073,8.25e-13,53;UBERON:0002616,8.25e-13,53;UBERON:0001017,3.15e-12,81;UBERON:0001049,3.19e-12,56;UBERON:0005068,3.19e-12,56;UBERON:0006241,3.19e-12,56;UBERON:0007135,3.19e-12,56;UBERON:0001016,7.10e-12,89;UBERON:0002780,8.33e-12,41;UBERON:0001890,8.33e-12,41;UBERON:0003080,8.33e-12,41;UBERON:0006240,8.33e-12,41;UBERON:0000955,2.61e-11,68;UBERON:0006238,2.61e-11,68;UBERON:0001869,3.20e-11,32;UBERON:0001893,1.07e-10,34;UBERON:0000956,1.50e-10,25;UBERON:0000203,1.50e-10,25;UBERON:0003528,3.33e-10,34;UBERON:0002020,3.33e-10,34;UBERON:0007023,3.62e-10,114;UBERON:0002791,6.38e-10,32 | |||
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| ||
|short_description=p2@BRP44 | |short_description=p2@BRP44 | ||
}} | }} |
Latest revision as of 11:45, 18 September 2015
Short description: | p2@BRP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BRP44_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_uc001ges.2_5end |
EntrezGene: | BRP44 |
HGNC: | 24515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.98e-13 | 22 |
neocortex | 3.13e-13 | 20 |
regional part of nervous system | 8.25e-13 | 53 |
regional part of brain | 8.25e-13 | 53 |
central nervous system | 3.15e-12 | 81 |
neural tube | 3.19e-12 | 56 |
neural rod | 3.19e-12 | 56 |
future spinal cord | 3.19e-12 | 56 |
neural keel | 3.19e-12 | 56 |
nervous system | 7.10e-12 | 89 |
regional part of forebrain | 8.33e-12 | 41 |
forebrain | 8.33e-12 | 41 |
anterior neural tube | 8.33e-12 | 41 |
future forebrain | 8.33e-12 | 41 |
brain | 2.61e-11 | 68 |
future brain | 2.61e-11 | 68 |
cerebral hemisphere | 3.20e-11 | 32 |
telencephalon | 1.07e-10 | 34 |
cerebral cortex | 1.50e-10 | 25 |
pallium | 1.50e-10 | 25 |
brain grey matter | 3.33e-10 | 34 |
gray matter | 3.33e-10 | 34 |
adult organism | 3.62e-10 | 114 |
regional part of telencephalon | 6.38e-10 | 32 |