FFCP PHASE1:Hg19::chr21:41029235..41029269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10317 | |EntrezGene=10317 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=920 | |HGNC=920 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2C3 | |UniProt=Q9Y2C3 | ||
|association_with_transcript=0bp_to_ENST00000380618,NM_006057,NM_033170,NM_033171,NM_033172,NM_033173,uc002yyi.1,uc002yyj.1,uc002yyk.1,uc002yyl.1,uc002yym.1_5end | |association_with_transcript=0bp_to_ENST00000380618,NM_006057,NM_033170,NM_033171,NM_033172,NM_033173,uc002yyi.1,uc002yyj.1,uc002yyk.1,uc002yyl.1,uc002yym.1_5end | ||
|cluster_id=chr21:41029235..41029269,+ | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_2_at_B3GALT5_5end | |description=CAGE_peak_2_at_B3GALT5_5end | ||
|id=chr21:41029235..41029269,+ | |id=chr21:41029235..41029269,+ | ||
|ontology_enrichment_celltype=CL:1000507!6.78e-31!12;CL:1000494!6.78e-31!12;CL:1000497!4.05e-29!18;CL:0002518!4.05e-29!18;CL:1000449!1.22e-22!16;CL:0002681!8.00e-14!13;CL:0002584!8.00e-14!13;CL:0000239!1.40e-12!3;CL:1000615!1.40e-12!3;CL:0002306!1.40e-12!3 | |ontology_enrichment_celltype=CL:1000507!6.78e-31!12;CL:1000494!6.78e-31!12;CL:1000497!4.05e-29!18;CL:0002518!4.05e-29!18;CL:1000449!1.22e-22!16;CL:0002681!8.00e-14!13;CL:0002584!8.00e-14!13;CL:0000239!1.40e-12!3;CL:1000615!1.40e-12!3;CL:0002306!1.40e-12!3 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.26e-74;10!CL:1000494;1.26e-74;10!CL:1000497;4.75e-63;17!CL:0002518;4.75e-63;17!CL:1000449;2.83e-49;15!CL:0002681;2.64e-30;12!CL:0002584;2.64e-30;12!CL:0000239;8.88e-24;3!CL:1000615;8.88e-24;3!CL:0002306;8.88e-24;3!CL:0000650;4.75e-16;2!CL:1000500;4.75e-16;2!CL:1000618;4.75e-16;2!CL:1001318;4.75e-16;2!CL:0002173;4.75e-16;2!CL:0000669;1.77e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.48e-74,10;CL:1000494,1.48e-74,10;CL:1000497,5.16e-63,17;CL:0002518,5.16e-63,17;CL:1000449,3.13e-49,15;CL:0002681,3.02e-30,12;CL:0002584,3.02e-30,12;CL:0000239,7.91e-24,3;CL:1000615,7.91e-24,3;CL:0002306,7.91e-24,3;CL:0000650,4.76e-16,2;CL:1000500,4.76e-16,2;CL:1000618,4.76e-16,2;CL:1001318,4.76e-16,2;CL:0002173,4.76e-16,2;CL:0000669,1.77e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.31e-09;1!UBERON:0001045;9.53e-09;1 | |||
|ontology_enrichment_disease=DOID:4929!2.61e-08!2;DOID:299!3.62e-08!25;DOID:4468!6.99e-08!2 | |ontology_enrichment_disease=DOID:4929!2.61e-08!2;DOID:299!3.62e-08!25;DOID:4468!6.99e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!6.78e-31!12;UBERON:0001231!6.78e-31!12;UBERON:0004810!6.78e-31!12;UBERON:0004211!1.22e-22!16;UBERON:0001285!1.22e-22!16;UBERON:0007684!1.22e-22!16;UBERON:0003220!1.22e-22!16;UBERON:0004208!1.22e-22!16;UBERON:0002113!1.52e-21!27;UBERON:0003918!1.52e-21!27;UBERON:0005095!1.52e-21!27;UBERON:0007687!1.52e-21!27;UBERON:0006555!3.51e-21!17;UBERON:0005103!3.51e-21!17;UBERON:0000083!3.51e-21!17;UBERON:0009201!3.51e-21!17;UBERON:0004819!3.51e-21!17;UBERON:0006553!3.51e-21!17;UBERON:0003074!3.51e-21!17;UBERON:0003060!3.51e-21!17;UBERON:0000080!6.92e-20!18;UBERON:0002120!6.92e-20!18;UBERON:0004875!6.92e-20!18;UBERON:0005721!6.92e-20!18;UBERON:0005754!6.92e-20!18;UBERON:0007297!6.92e-20!18;UBERON:0000058!9.01e-19!26;UBERON:0006554!1.91e-18!44;UBERON:0001008!6.00e-18!45;UBERON:0000489!1.08e-17!32;UBERON:0004876!1.10e-17!20;UBERON:0003887!9.64e-17!21;UBERON:0005409!5.25e-15!35;UBERON:0001225!8.00e-14!13;UBERON:0008987!8.00e-14!13;UBERON:0006853!1.40e-12!3;UBERON:0007685!1.40e-12!3;UBERON:0004134!1.40e-12!3;UBERON:0005172!2.16e-12!55;UBERON:0005173!2.16e-12!55;UBERON:0000160!9.61e-12!27;UBERON:0001851!4.96e-11!16;UBERON:0002417!7.95e-11!61;UBERON:0000916!7.95e-11!61;UBERON:0003064!2.22e-10!37;UBERON:0000353!2.55e-10!17;UBERON:0003103!4.78e-09!69;UBERON:0005177!2.52e-07!107;UBERON:0001155!3.17e-07!9;UBERON:0004119!8.26e-07!169;UBERON:0000925!8.26e-07!169;UBERON:0006595!8.26e-07!169;UBERON:0004921!9.99e-07!129;UBERON:0004185!9.99e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.26e-74;10!UBERON:0009773;1.26e-74;10!UBERON:0001231;1.26e-74;10!UBERON:0004810;1.26e-74;10!UBERON:0006555;2.83e-49;15!UBERON:0004819;2.83e-49;15!UBERON:0001285;2.83e-49;15!UBERON:0007684;2.83e-49;15!UBERON:0002113;4.38e-44;24!UBERON:0011143;4.38e-44;24!UBERON:0000489;3.88e-36;29!UBERON:0006554;7.26e-35;30!UBERON:0001008;7.26e-35;30!UBERON:0001225;2.64e-30;12!UBERON:0008987;2.64e-30;12!UBERON:0001851;4.14e-24;15!UBERON:0000353;4.14e-24;15!UBERON:0006853;8.88e-24;3!UBERON:0007685;8.88e-24;3!UBERON:0004134;8.88e-24;3!UBERON:0005409;2.11e-20;22!UBERON:0005172;5.67e-17;52!UBERON:0005173;5.67e-17;52!UBERON:0003567;4.75e-16;2!UBERON:0003838;4.75e-16;2!UBERON:0003586;4.75e-16;2!UBERON:0005169;4.75e-16;2!UBERON:0002321;4.75e-16;2!UBERON:0005215;4.75e-16;2!UBERON:0002303;4.75e-16;2!UBERON:0002319;4.75e-16;2!UBERON:0000160;5.31e-15;17!UBERON:0004921;1.69e-14;33!UBERON:0001155;5.46e-14;9!UBERON:0002417;1.98e-12;58!UBERON:0000916;1.98e-12;58!UBERON:0000059;1.77e-11;11!UBERON:0002372;6.46e-09;1!UBERON:0001961;6.46e-09;1!UBERON:0001744;6.46e-09;1!UBERON:0001042;6.46e-09;1!UBERON:0001735;6.46e-09;1!UBERON:0001154;9.53e-09;1!UBERON:0001153;9.53e-09;1!UBERON:0009854;9.53e-09;1!UBERON:0003891;1.77e-08;4!UBERON:0003103;6.07e-08;61!UBERON:0005177;2.20e-07;99!UBERON:0000945;4.16e-07;5!UBERON:0010039;4.16e-07;5!UBERON:0002108;4.23e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.48e-74,10;UBERON:0004211,3.13e-49,15;UBERON:0009773,3.13e-49,15;UBERON:0001231,3.13e-49,15;UBERON:0001285,3.13e-49,15;UBERON:0007684,3.13e-49,15;UBERON:0004208,3.13e-49,15;UBERON:0006555,4.62e-46,16;UBERON:0004819,4.62e-46,16;UBERON:0002113,1.62e-40,26;UBERON:0003918,1.62e-40,26;UBERON:0011143,1.62e-40,26;UBERON:0005095,1.62e-40,26;UBERON:0007687,1.62e-40,26;UBERON:0000489,1.18e-33,31;UBERON:0001225,3.02e-30,12;UBERON:0008987,3.02e-30,12;UBERON:0005172,2.31e-25,54;UBERON:0005173,2.31e-25,54;UBERON:0001851,4.61e-24,15;UBERON:0000353,4.61e-24,15;UBERON:0006853,7.91e-24,3;UBERON:0007685,7.91e-24,3;UBERON:0004134,7.91e-24,3;UBERON:0002417,1.42e-22,60;UBERON:0000916,1.42e-22,60;UBERON:0006554,1.70e-21,47;UBERON:0001008,5.26e-21,48;UBERON:0005409,5.60e-18,25;UBERON:0003567,4.76e-16,2;UBERON:0003838,4.76e-16,2;UBERON:0003586,4.76e-16,2;UBERON:0005169,4.76e-16,2;UBERON:0002321,4.76e-16,2;UBERON:0005215,4.76e-16,2;UBERON:0002303,4.76e-16,2;UBERON:0002319,4.76e-16,2;UBERON:0000160,4.69e-15,17;UBERON:0005177,2.36e-14,101;UBERON:0003103,3.28e-14,68;UBERON:0001155,4.69e-14,9;UBERON:0009569,1.13e-12,112;UBERON:0000059,1.56e-11,11;UBERON:0002372,6.72e-09,1;UBERON:0001961,6.72e-09,1;UBERON:0001744,6.72e-09,1;UBERON:0001735,6.72e-09,1;UBERON:0001154,7.85e-09,1;UBERON:0001153,7.85e-09,1;UBERON:0001045,7.85e-09,1;UBERON:0003891,1.77e-08,4;UBERON:0003104,4.83e-08,160;UBERON:0009142,4.83e-08,160;UBERON:0003914,2.62e-07,117;UBERON:0002108,4.16e-07,4 | |||
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|short_description=p2@B3GALT5 | |short_description=p2@B3GALT5 | ||
}} | }} |
Latest revision as of 11:45, 18 September 2015
Short description: | p2@B3GALT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_B3GALT5_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | 0bp_to_ENST00000380618, NM_006057, NM_033170, NM_033171, NM_033172, NM_033173, uc002yyi.1, uc002yyj.1, uc002yyk.1, uc002yyl.1, uc002yym.1_5end |
EntrezGene: | B3GALT5 |
HGNC: | 920 |
UniProt: | Q9Y2C3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.48e-74 | 10 |
nephron tubule epithelial cell | 1.48e-74 | 10 |
kidney cell | 5.16e-63 | 17 |
kidney epithelial cell | 5.16e-63 | 17 |
epithelial cell of nephron | 3.13e-49 | 15 |
kidney cortical cell | 3.02e-30 | 12 |
renal cortical epithelial cell | 3.02e-30 | 12 |
brush border epithelial cell | 7.91e-24 | 3 |
kidney cortex tubule cell | 7.91e-24 | 3 |
epithelial cell of proximal tubule | 7.91e-24 | 3 |
mesangial cell | 4.76e-16 | 2 |
kidney interstitial cell | 4.76e-16 | 2 |
juxtaglomerular complex cell | 4.76e-16 | 2 |
renal interstitial pericyte | 4.76e-16 | 2 |
extraglomerular mesangial cell | 4.76e-16 | 2 |
pericyte cell | 1.77e-08 | 4 |