FFCP PHASE1:Hg19::chr2:74757700..74757770,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27429 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14348 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000482205,ENST00000482331,uc010ffl.2_5end | |||
|cluster_id=chr2:74757700..74757770,+ | |||
|description=CAGE_peak_2_at_HTRA2_5end | |||
|id=chr2:74757700..74757770,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.37e-22!180;CL:0000048!4.28e-20!430;CL:0000723!2.92e-19!436;CL:0000034!3.22e-18!444;CL:0002371!2.73e-15!591;CL:0002320!8.38e-14!365;CL:0000012!1.04e-13!682;CL:0000144!2.07e-13!625;CL:0000219!2.58e-13!390;CL:0000003!2.63e-13!722;CL:0000548!4.79e-13!679;CL:0000004!4.79e-13!679;CL:0000255!4.79e-13!679;CL:0000057!2.26e-12!75;CL:0000134!3.90e-12!358;CL:0000183!4.04e-11!59;CL:0000680!7.27e-11!57;CL:0000056!7.27e-11!57;CL:0000355!7.27e-11!57;CL:0000187!1.45e-10!54;CL:0000192!3.98e-10!42;CL:0000514!3.98e-10!42;CL:0000393!8.69e-08!60;CL:0000211!8.69e-08!60;CL:0000359!1.19e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.54e-07;32!CL:0000192;1.77e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.37e-22,427;CL:0000723,4.14e-21,433;CL:0000034,5.50e-20,441;CL:0002320,2.49e-15,361;CL:0000219,1.11e-14,386;CL:0000134,1.52e-13,354;CL:0000057,8.78e-13,76;CL:0000680,5.96e-11,58;CL:0000056,5.96e-11,58;CL:0000355,5.96e-11,58;CL:0000187,1.22e-10,55;CL:0000192,3.70e-10,43;CL:0000514,3.70e-10,43;CL:0000359,8.67e-08,32;CL:0000393,1.00e-07,61;CL:0000211,1.00e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;1.77e-07;43 | |||
|ontology_enrichment_disease=DOID:2531!6.31e-07!51;DOID:0060083!6.31e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.91e-07,51;DOID:0060083,3.91e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.36e-15!375;UBERON:0000914!1.28e-11!83;UBERON:0002329!1.28e-11!83;UBERON:0003077!1.28e-11!83;UBERON:0003059!1.28e-11!83;UBERON:0007282!1.28e-11!83;UBERON:0009618!1.28e-11!83;UBERON:0007285!1.28e-11!83;UBERON:0004290!5.20e-11!70;UBERON:0000486!2.98e-10!82;UBERON:0001134!6.51e-09!61;UBERON:0002036!6.51e-09!61;UBERON:0003082!6.51e-09!61;UBERON:0002385!2.79e-08!63;UBERON:0001015!2.79e-08!63;UBERON:0000383!2.79e-08!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.64e-17,371;UBERON:0002329,5.29e-11,71;UBERON:0003059,5.29e-11,71;UBERON:0007282,5.29e-11,71;UBERON:0004290,5.29e-11,71;UBERON:0009618,5.29e-11,71;UBERON:0007503,1.63e-10,78;UBERON:0003077,1.89e-10,72;UBERON:0007285,1.89e-10,72;UBERON:0007524,2.82e-10,73;UBERON:0000486,4.65e-10,83;UBERON:0001134,7.10e-09,62;UBERON:0002036,7.10e-09,62;UBERON:0003082,7.10e-09,62;UBERON:0002385,4.23e-08,64;UBERON:0001015,4.23e-08,64;UBERON:0000383,4.23e-08,64 | |||
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| |||
|short_description=p2@HTRA2 | |||
}} |
Latest revision as of 11:56, 18 September 2015
Short description: | p2@HTRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HTRA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000482205, ENST00000482331, uc010ffl.2_5end |
EntrezGene: | HTRA2 |
HGNC: | 14348 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.37e-22 | 427 |
somatic stem cell | 4.14e-21 | 433 |
stem cell | 5.50e-20 | 441 |
connective tissue cell | 2.49e-15 | 361 |
motile cell | 1.11e-14 | 386 |
mesenchymal cell | 1.52e-13 | 354 |
fibroblast | 8.78e-13 | 76 |
muscle precursor cell | 5.96e-11 | 58 |
myoblast | 5.96e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.96e-11 | 58 |
muscle cell | 1.22e-10 | 55 |
smooth muscle cell | 3.70e-10 | 43 |
smooth muscle myoblast | 3.70e-10 | 43 |
vascular associated smooth muscle cell | 8.67e-08 | 32 |
electrically responsive cell | 1.00e-07 | 61 |
electrically active cell | 1.00e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.64e-17 | 371 |
somite | 5.29e-11 | 71 |
presomitic mesoderm | 5.29e-11 | 71 |
presumptive segmental plate | 5.29e-11 | 71 |
dermomyotome | 5.29e-11 | 71 |
trunk paraxial mesoderm | 5.29e-11 | 71 |
epithelial vesicle | 1.63e-10 | 78 |
paraxial mesoderm | 1.89e-10 | 72 |
presumptive paraxial mesoderm | 1.89e-10 | 72 |
dense mesenchyme tissue | 2.82e-10 | 73 |
multilaminar epithelium | 4.65e-10 | 83 |
skeletal muscle tissue | 7.10e-09 | 62 |
striated muscle tissue | 7.10e-09 | 62 |
myotome | 7.10e-09 | 62 |
muscle tissue | 4.23e-08 | 64 |
musculature | 4.23e-08 | 64 |
musculature of body | 4.23e-08 | 64 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.91e-07 | 51 |
immune system cancer | 3.91e-07 | 51 |