FFCP PHASE1:Hg19::chr6:36725084..36725094,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2318 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=63bp_to_ENST00000459703,ENST00000493411_5end | |||
|cluster_id=chr6:36725084..36725094,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_10_at_CPNE5_5end | |||
|id=chr6:36725084..36725094,- | |||
|ontology_enrichment_celltype=CL:0002057!7.91e-67!42;CL:0000860!1.32e-61!45;CL:0002087!3.40e-53!119;CL:0000738!1.61e-52!140;CL:0002194!3.42e-47!63;CL:0000576!3.42e-47!63;CL:0000040!3.42e-47!63;CL:0000559!3.42e-47!63;CL:0002031!1.78e-46!124;CL:0002009!2.14e-45!65;CL:0000766!1.90e-44!76;CL:0000839!2.36e-41!70;CL:0000037!5.07e-41!172;CL:0000566!5.07e-41!172;CL:0000557!1.30e-40!71;CL:0000988!2.54e-39!182;CL:0002032!3.69e-37!165;CL:0000837!3.69e-37!165;CL:0000763!1.17e-27!112;CL:0000049!1.17e-27!112;CL:0000945!6.74e-15!24;CL:0000826!6.74e-15!24;CL:0000134!1.92e-14!358;CL:0002139!2.00e-14!24;CL:0002320!7.79e-14!365;CL:0000219!2.67e-12!390;CL:0000071!2.69e-12!18;CL:0002546!2.69e-12!18;CL:0000115!5.12e-12!35;CL:0000048!6.12e-11!430;CL:0000723!1.51e-10!436;CL:0000034!4.82e-10!444;CL:0000063!5.05e-10!578;CL:0002371!2.98e-09!591;CL:0000838!5.07e-09!52;CL:0000542!9.04e-09!53;CL:0000051!9.04e-09!53;CL:0002078!9.11e-09!44;CL:0000767!2.44e-08!3;CL:0000144!1.19e-07!625;CL:0002144!1.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-104;33!CL:0002057;1.01e-104;33!CL:0000473;3.34e-71;39!CL:0000234;3.34e-71;39!CL:0000576;5.77e-57;48!CL:0000766;7.04e-38;69!CL:0002087;6.74e-19;104!CL:0000767;1.15e-15;3!CL:0000763;2.34e-15;100!CL:0000738;1.70e-10;136!CL:0002393;5.50e-08;6!CL:0002397;5.50e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.24e-107,42;CL:0002057,2.24e-107,42;CL:0000473,3.84e-93,48;CL:0000234,3.84e-93,48;CL:0002194,3.31e-73,59;CL:0000576,3.31e-73,59;CL:0000040,3.31e-73,59;CL:0000559,3.31e-73,59;CL:0000766,4.81e-72,72;CL:0002009,1.24e-70,61;CL:0000839,7.15e-65,66;CL:0000557,8.03e-64,67;CL:0000763,5.77e-46,108;CL:0000049,5.77e-46,108;CL:0002087,2.19e-45,115;CL:0000738,3.71e-45,136;CL:0002031,1.48e-40,120;CL:0000037,3.13e-35,168;CL:0002032,6.95e-35,161;CL:0000837,6.95e-35,161;CL:0000988,4.43e-33,177;CL:0000767,1.05e-15,3;CL:0000134,6.98e-14,354;CL:0002320,1.82e-13,361;CL:0000219,5.33e-12,386;CL:0000048,4.61e-11,427;CL:0000723,8.40e-11,433;CL:0000034,1.82e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-79;42!CL:0000049;7.82e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.91e-35!80;UBERON:0002193!4.19e-32!112;UBERON:0001474!1.45e-31!86;UBERON:0002405!4.80e-31!115;UBERON:0002390!1.49e-29!102;UBERON:0003061!1.49e-29!102;UBERON:0004765!3.25e-25!101;UBERON:0001434!3.25e-25!101;UBERON:0003081!4.93e-22!216;UBERON:0002384!5.25e-13!375;UBERON:0001986!2.69e-12!18;UBERON:0004638!2.69e-12!18;UBERON:0004852!2.69e-12!18;UBERON:0002204!4.73e-11!167;UBERON:0000487!1.27e-09!22;UBERON:0006914!3.46e-08!25;UBERON:0001915!1.34e-07!3;UBERON:0001982!1.34e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-55,76;UBERON:0001474,4.27e-51,82;UBERON:0002405,2.07e-47,93;UBERON:0004765,5.06e-46,90;UBERON:0002390,1.02e-44,98;UBERON:0003061,1.02e-44,98;UBERON:0002193,1.01e-42,108;UBERON:0001434,8.27e-41,100;UBERON:0002204,7.12e-22,167;UBERON:0003081,3.75e-21,203;UBERON:0002384,6.72e-13,371;UBERON:0000926,3.90e-11,315;UBERON:0004120,3.90e-11,315;UBERON:0006603,3.90e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.656804715599566,0.629686250509434,5.50709987588466,1.53531759238885,3.40595471295367,0,0,0,0.774672005803016,0.853015394924529,0,3.87796785972314,3.00816671205213,1.08505435357926,0,0,0,0.581592955118259,3.77875943688809,1.4555043671269,1.16214518452842,1.6446715520873,3.09706370895104,1.1507695692886,4.86705342405291,5.91205574721463,1.72372840368309,7.74581620300591,13.5426486594342,1.50593871634084,1.91034305040492,1.57306439111559,3.06083892370903,8.66508373105453,3.83602275479425,0.329851300186716,2.79249120670285,1.27867425159808,2.90209238628584,4.53908179752912,3.11411124497787,1.7587406567972,6.25779502104242,6.5156653411535,1.21079900526674,7.36555271975129,5.69632297393592,0.211255286311942,0,0,0.336985893439485,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,1.70763890732835,0,1.52909291250092,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0,2.41697590265488,0.760272105718513,0.488124115096339,0.735326160691737,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01056513432752,0.462985512576611,0.380508304469197,0,0,0,0.702012795417713,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471464371102113,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,2.56454793842586 | |||
|short_description=p10@CPNE5 | |||
}} |
Latest revision as of 13:20, 18 September 2015
Short description: | p10@CPNE5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CPNE5_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 63bp_to_ENST00000459703, ENST00000493411_5end |
EntrezGene: | CPNE5 |
HGNC: | 2318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.24e-107 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.24e-107 | 42 |
defensive cell | 3.84e-93 | 48 |
phagocyte | 3.84e-93 | 48 |
monopoietic cell | 3.31e-73 | 59 |
monocyte | 3.31e-73 | 59 |
monoblast | 3.31e-73 | 59 |
promonocyte | 3.31e-73 | 59 |
myeloid leukocyte | 4.81e-72 | 72 |
macrophage dendritic cell progenitor | 1.24e-70 | 61 |
myeloid lineage restricted progenitor cell | 7.15e-65 | 66 |
granulocyte monocyte progenitor cell | 8.03e-64 | 67 |
myeloid cell | 5.77e-46 | 108 |
common myeloid progenitor | 5.77e-46 | 108 |
nongranular leukocyte | 2.19e-45 | 115 |
leukocyte | 3.71e-45 | 136 |
hematopoietic lineage restricted progenitor cell | 1.48e-40 | 120 |
hematopoietic stem cell | 3.13e-35 | 168 |
hematopoietic oligopotent progenitor cell | 6.95e-35 | 161 |
hematopoietic multipotent progenitor cell | 6.95e-35 | 161 |
hematopoietic cell | 4.43e-33 | 177 |
basophil | 1.05e-15 | 3 |
mesenchymal cell | 6.98e-14 | 354 |
connective tissue cell | 1.82e-13 | 361 |
motile cell | 5.33e-12 | 386 |
multi fate stem cell | 4.61e-11 | 427 |
somatic stem cell | 8.40e-11 | 433 |
stem cell | 1.82e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.36e-55 | 76 |
bone element | 4.27e-51 | 82 |
immune system | 2.07e-47 | 93 |
skeletal element | 5.06e-46 | 90 |
hematopoietic system | 1.02e-44 | 98 |
blood island | 1.02e-44 | 98 |
hemolymphoid system | 1.01e-42 | 108 |
skeletal system | 8.27e-41 | 100 |
musculoskeletal system | 7.12e-22 | 167 |
lateral plate mesoderm | 3.75e-21 | 203 |
connective tissue | 6.72e-13 | 371 |
mesoderm | 3.90e-11 | 315 |
mesoderm-derived structure | 3.90e-11 | 315 |
presumptive mesoderm | 3.90e-11 | 315 |