FFCP PHASE1:Hg19::chr16:9057727..9057830,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7874 | |EntrezGene=7874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12630 | |HGNC=12630 | ||
|TSSclassifier=strong | |||
|UniProt=Q93009,Q6U8A4 | |UniProt=Q93009,Q6U8A4 | ||
|association_with_transcript=-386bp_to_ENST00000344836,NM_003470,uc002czl.2_5end | |association_with_transcript=-386bp_to_ENST00000344836,NM_003470,uc002czl.2_5end | ||
|cluster_id=chr16:9057727..9057830,- | |||
|description=CAGE_peak_1_at_USP7_5end | |description=CAGE_peak_1_at_USP7_5end | ||
|id=chr16:9057727..9057830,- | |id=chr16:9057727..9057830,- | ||
|ontology_enrichment_celltype=CL:0000037!1.17e-26!172;CL:0000566!1.17e-26!172;CL:0000738!5.61e-26!140;CL:0002032!6.87e-24!165;CL:0000837!6.87e-24!165;CL:0000988!4.76e-23!182;CL:0002031!7.57e-21!124;CL:0002087!6.75e-20!119;CL:0000763!1.85e-14!112;CL:0000049!1.85e-14!112;CL:0002057!6.67e-14!42;CL:0000766!1.36e-13!76;CL:0000860!1.22e-12!45;CL:0000557!2.97e-11!71;CL:0000839!4.74e-11!70;CL:0002009!1.79e-10!65;CL:0002194!8.62e-10!63;CL:0000576!8.62e-10!63;CL:0000040!8.62e-10!63;CL:0000559!8.62e-10!63;CL:0000838!1.70e-09!52;CL:0000542!2.88e-09!53;CL:0000051!2.88e-09!53 | |ontology_enrichment_celltype=CL:0000037!1.17e-26!172;CL:0000566!1.17e-26!172;CL:0000738!5.61e-26!140;CL:0002032!6.87e-24!165;CL:0000837!6.87e-24!165;CL:0000988!4.76e-23!182;CL:0002031!7.57e-21!124;CL:0002087!6.75e-20!119;CL:0000763!1.85e-14!112;CL:0000049!1.85e-14!112;CL:0002057!6.67e-14!42;CL:0000766!1.36e-13!76;CL:0000860!1.22e-12!45;CL:0000557!2.97e-11!71;CL:0000839!4.74e-11!70;CL:0002009!1.79e-10!65;CL:0002194!8.62e-10!63;CL:0000576!8.62e-10!63;CL:0000040!8.62e-10!63;CL:0000559!8.62e-10!63;CL:0000838!1.70e-09!52;CL:0000542!2.88e-09!53;CL:0000051!2.88e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-13;33!CL:0002057;1.35e-13;33!CL:0000473;4.95e-09;39!CL:0000234;4.95e-09;39!CL:0000576;1.19e-08;48!CL:0002087;9.07e-08;104!CL:0000766;5.38e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.35e-13;33!CL:0002057;1.35e-13;33!CL:0000473;4.95e-09;39!CL:0000234;4.95e-09;39!CL:0000576;1.19e-08;48!CL:0002087;9.07e-08;104!CL:0000766;5.38e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.08e-27,168;CL:0000738,3.51e-27,136;CL:0002032,7.13e-25,161;CL:0000837,7.13e-25,161;CL:0000988,3.83e-24,177;CL:0002031,5.74e-22,120;CL:0002087,5.16e-21,115;CL:0000763,2.28e-15,108;CL:0000049,2.28e-15,108;CL:0000766,8.93e-15,72;CL:0000860,6.67e-14,42;CL:0002057,6.67e-14,42;CL:0000557,2.55e-12,67;CL:0000839,4.11e-12,66;CL:0002009,1.49e-11,61;CL:0000473,3.75e-11,48;CL:0000234,3.75e-11,48;CL:0002194,7.79e-11,59;CL:0000576,7.79e-11,59;CL:0000040,7.79e-11,59;CL:0000559,7.79e-11,59;CL:0000838,1.70e-09,52;CL:0000542,2.88e-09,53;CL:0000051,2.88e-09,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-10;42 | |ontology_enrichment_development_v019=CL:0002057;1.38e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.10e-20!115;UBERON:0002390!1.03e-13!102;UBERON:0003061!1.03e-13!102;UBERON:0002193!8.56e-11!112;UBERON:0002371!1.66e-07!80;UBERON:0003080!2.07e-07!42;UBERON:0002780!3.60e-07!41;UBERON:0001890!3.60e-07!41;UBERON:0006240!3.60e-07!41;UBERON:0002020!3.98e-07!34;UBERON:0003528!3.98e-07!34;UBERON:0000178!4.58e-07!15;UBERON:0000179!4.58e-07!15;UBERON:0000463!4.58e-07!15;UBERON:0001017!4.64e-07!82;UBERON:0001869!6.63e-07!32;UBERON:0001893!6.82e-07!34;UBERON:0001049!8.42e-07!57;UBERON:0005068!8.42e-07!57;UBERON:0006241!8.42e-07!57;UBERON:0007135!8.42e-07!57;UBERON:0002791!8.68e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!1.10e-20!115;UBERON:0002390!1.03e-13!102;UBERON:0003061!1.03e-13!102;UBERON:0002193!8.56e-11!112;UBERON:0002371!1.66e-07!80;UBERON:0003080!2.07e-07!42;UBERON:0002780!3.60e-07!41;UBERON:0001890!3.60e-07!41;UBERON:0006240!3.60e-07!41;UBERON:0002020!3.98e-07!34;UBERON:0003528!3.98e-07!34;UBERON:0000178!4.58e-07!15;UBERON:0000179!4.58e-07!15;UBERON:0000463!4.58e-07!15;UBERON:0001017!4.64e-07!82;UBERON:0001869!6.63e-07!32;UBERON:0001893!6.82e-07!34;UBERON:0001049!8.42e-07!57;UBERON:0005068!8.42e-07!57;UBERON:0006241!8.42e-07!57;UBERON:0007135!8.42e-07!57;UBERON:0002791!8.68e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-07;15!UBERON:0000179;4.94e-07;15!UBERON:0000463;4.94e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.94e-07;15!UBERON:0000179;4.94e-07;15!UBERON:0000463;4.94e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.33e-20,114;UBERON:0002390,1.19e-14,98;UBERON:0003061,1.19e-14,98;UBERON:0002193,1.63e-11,108;UBERON:0002371,3.40e-08,76;UBERON:0002405,2.59e-07,93;UBERON:0001474,2.64e-07,82;UBERON:0002780,3.60e-07,41;UBERON:0001890,3.60e-07,41;UBERON:0003080,3.60e-07,41;UBERON:0006240,3.60e-07,41;UBERON:0003528,3.98e-07,34;UBERON:0002020,3.98e-07,34;UBERON:0000178,4.58e-07,15;UBERON:0000179,4.58e-07,15;UBERON:0000463,4.58e-07,15;UBERON:0001869,6.63e-07,32;UBERON:0001893,6.82e-07,34;UBERON:0001017,7.42e-07,81;UBERON:0002791,7.80e-07,32 | |||
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|short_description=p1@USP7 | |short_description=p1@USP7 | ||
}} | }} |
Latest revision as of 13:25, 18 September 2015
Short description: | p1@USP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP7_5end |
Coexpression cluster: | NA |
Association with transcript: | -386bp_to_ENST00000344836, NM_003470, uc002czl.2_5end |
EntrezGene: | USP7 |
HGNC: | 12630 |
UniProt: | Q93009Q6U8A4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.08e-27 | 168 |
leukocyte | 3.51e-27 | 136 |
hematopoietic oligopotent progenitor cell | 7.13e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.13e-25 | 161 |
hematopoietic cell | 3.83e-24 | 177 |
hematopoietic lineage restricted progenitor cell | 5.74e-22 | 120 |
nongranular leukocyte | 5.16e-21 | 115 |
myeloid cell | 2.28e-15 | 108 |
common myeloid progenitor | 2.28e-15 | 108 |
myeloid leukocyte | 8.93e-15 | 72 |
classical monocyte | 6.67e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.67e-14 | 42 |
granulocyte monocyte progenitor cell | 2.55e-12 | 67 |
myeloid lineage restricted progenitor cell | 4.11e-12 | 66 |
macrophage dendritic cell progenitor | 1.49e-11 | 61 |
defensive cell | 3.75e-11 | 48 |
phagocyte | 3.75e-11 | 48 |
monopoietic cell | 7.79e-11 | 59 |
monocyte | 7.79e-11 | 59 |
monoblast | 7.79e-11 | 59 |
promonocyte | 7.79e-11 | 59 |
lymphoid lineage restricted progenitor cell | 1.70e-09 | 52 |
lymphocyte | 2.88e-09 | 53 |
common lymphoid progenitor | 2.88e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.33e-20 | 114 |
hematopoietic system | 1.19e-14 | 98 |
blood island | 1.19e-14 | 98 |
hemolymphoid system | 1.63e-11 | 108 |
bone marrow | 3.40e-08 | 76 |
immune system | 2.59e-07 | 93 |
bone element | 2.64e-07 | 82 |
regional part of forebrain | 3.60e-07 | 41 |
forebrain | 3.60e-07 | 41 |
anterior neural tube | 3.60e-07 | 41 |
future forebrain | 3.60e-07 | 41 |
brain grey matter | 3.98e-07 | 34 |
gray matter | 3.98e-07 | 34 |
blood | 4.58e-07 | 15 |
haemolymphatic fluid | 4.58e-07 | 15 |
organism substance | 4.58e-07 | 15 |
cerebral hemisphere | 6.63e-07 | 32 |
telencephalon | 6.82e-07 | 34 |
central nervous system | 7.42e-07 | 81 |
regional part of telencephalon | 7.80e-07 | 32 |