FFCP PHASE1:Hg19::chr19:45254508..45254528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=602 | |EntrezGene=602 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=998 | |HGNC=998 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000444487_5end | |association_with_transcript=-49bp_to_ENST00000444487_5end | ||
|cluster_id=chr19:45254508..45254528,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_12_at_BCL3_5end | |description=CAGE_peak_12_at_BCL3_5end | ||
|id=chr19:45254508..45254528,+ | |id=chr19:45254508..45254528,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.58e-21!42;CL:0000860!2.66e-19!45;CL:0000766!9.89e-18!76;CL:0000557!2.59e-16!71;CL:0002009!3.26e-16!65;CL:0002194!3.77e-15!63;CL:0000576!3.77e-15!63;CL:0000040!3.77e-15!63;CL:0000559!3.77e-15!63;CL:0000839!1.07e-14!70;CL:0000738!9.71e-13!140;CL:0002031!5.88e-10!124;CL:0000763!1.01e-09!112;CL:0000049!1.01e-09!112;CL:0002087!1.50e-09!119;CL:0002320!4.24e-09!365;CL:0000134!2.60e-08!358;CL:0000988!1.58e-07!182;CL:0000048!2.24e-07!430;CL:0002032!3.13e-07!165;CL:0000837!3.13e-07!165;CL:0000723!9.22e-07!436;CL:0000037!9.24e-07!172;CL:0000566!9.24e-07!172 | |ontology_enrichment_celltype=CL:0002057!3.58e-21!42;CL:0000860!2.66e-19!45;CL:0000766!9.89e-18!76;CL:0000557!2.59e-16!71;CL:0002009!3.26e-16!65;CL:0002194!3.77e-15!63;CL:0000576!3.77e-15!63;CL:0000040!3.77e-15!63;CL:0000559!3.77e-15!63;CL:0000839!1.07e-14!70;CL:0000738!9.71e-13!140;CL:0002031!5.88e-10!124;CL:0000763!1.01e-09!112;CL:0000049!1.01e-09!112;CL:0002087!1.50e-09!119;CL:0002320!4.24e-09!365;CL:0000134!2.60e-08!358;CL:0000988!1.58e-07!182;CL:0000048!2.24e-07!430;CL:0002032!3.13e-07!165;CL:0000837!3.13e-07!165;CL:0000723!9.22e-07!436;CL:0000037!9.24e-07!172;CL:0000566!9.24e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.60e-56;33!CL:0002057;7.60e-56;33!CL:0000473;2.47e-42;39!CL:0000234;2.47e-42;39!CL:0000576;7.34e-28;48!CL:0000766;6.33e-22;69!CL:0000763;5.60e-11;100!CL:0000775;1.94e-08;3!CL:0000738;7.86e-08;136!CL:0002087;1.14e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.00e-53,42;CL:0002057,4.00e-53,42;CL:0000473,4.23e-51,48;CL:0000234,4.23e-51,48;CL:0000766,1.11e-45,72;CL:0000557,7.22e-44,67;CL:0002009,7.61e-42,61;CL:0000839,6.38e-40,66;CL:0002194,1.16e-38,59;CL:0000576,1.16e-38,59;CL:0000040,1.16e-38,59;CL:0000559,1.16e-38,59;CL:0000763,3.99e-31,108;CL:0000049,3.99e-31,108;CL:0000738,1.35e-28,136;CL:0002031,3.13e-23,120;CL:0002087,9.47e-21,115;CL:0000037,1.68e-20,168;CL:0002032,8.13e-20,161;CL:0000837,8.13e-20,161;CL:0000988,1.03e-19,177;CL:0002320,8.75e-13,361;CL:0000134,1.06e-12,354;CL:0000048,4.88e-11,427;CL:0000723,1.23e-10,433;CL:0000219,4.05e-10,386;CL:0000034,4.07e-10,441;CL:0000775,1.81e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.30e-38;42!CL:0000049;6.71e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.30e-14!80;UBERON:0002390!1.60e-13!102;UBERON:0003061!1.60e-13!102;UBERON:0002193!2.30e-13!112;UBERON:0001474!7.60e-13!86;UBERON:0004765!1.05e-11!101;UBERON:0001434!1.05e-11!101;UBERON:0002405!1.50e-11!115;UBERON:0002204!6.37e-10!167;UBERON:0000926!2.21e-09!448;UBERON:0004120!2.21e-09!448;UBERON:0006603!2.21e-09!448;UBERON:0002384!1.45e-08!375;UBERON:0003081!1.83e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.39e-39,76;UBERON:0001474,1.33e-35,82;UBERON:0004765,3.55e-33,90;UBERON:0002390,8.16e-33,98;UBERON:0003061,8.16e-33,98;UBERON:0001434,3.02e-30,100;UBERON:0002405,5.40e-30,93;UBERON:0002193,1.30e-28,108;UBERON:0002204,2.43e-22,167;UBERON:0003081,1.24e-18,203;UBERON:0000926,2.05e-12,315;UBERON:0004120,2.05e-12,315;UBERON:0006603,2.05e-12,315;UBERON:0002384,5.60e-12,371 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0,2.09340350391728,0.218441372130172,0.263766978228454,0.618831764800233,0.331397375727916,0,0,0,0.487932798790507,0.492484232307152,0.408001382488506,0,0,0.958120975510189,0.251085279189606,0.382067028739756,0.328402357799783,0.236132343941038,0.393364276848904,0,0.77408061658038,0.919421224478927,0.90361775633475,0.369754010166788,0.0774672005803016,0,0,1.10799081706375,4.61252229181326,0.868043482863407,0.447830948479849,0.32389366601898,0,5.37973483484389,2.64513160582167,3.39617685662943,8.83230340241602,4.11167888021826,3.09706370895104,9.49384894663097,7.68482119587302,4.02019790810595,1.03423704220986,1.93645405075148,1.35426486594342,8.65914761895982,7.36846605156184,4.26974620445661,5.81559395504715,3.53021929783703,3.83602275479425,10.2253903057882,10.1726465387032,5.11469700639233,6.09439401120026,1.70215567407342,3.73693349397345,5.02497330513487,5.21482918420201,3.25783267057675,3.02699751316684,1.84138817993782,2.53169909952708,0.211255286311942,0.425208599930087,0.209658645508376,0.336985893439485,1.05123824989054,0.64290234678832,0,0,0,0,0.546138611262131,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,1.17903228824749,0.616804496998528,0.167186495390678,0,0,1.94826728407911,0.445641827540694,0,0,0,0.384273959177026,0.520237390239513,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0,0,0,0,0,0.255973222308837,0,0,0,0,1.87208137048455,0.144824403882799,0,0.670700859703636,0,0.361439152384566,0.50133791063589,1.01392563272577,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0.56530794192401,0,0.825354125820202,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0,0,11.6334079244498,0,0,0.759783069987479,0.132409180813219,0,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0.161872944368132,0.280901613404497,0,0.61417158655884,0.206651562351531,0,0,0,0.718618141816238,0,0.500474079487857,0,0,0,0.751190294532984,0.113432183160021,0,0,0.211931901159562,0,0.515262646192195,0.515281080091258,0.18611685633159,0,0.389748020644795,0,0.184099797284599,0.484938170456436,0.710019185033229,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,5.14592750554308,1.38134921352481,0,0,0.354920400119532,0.168584690078102,0.723033089650446,0.441175890929576,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0.4115740113314,0,0,1.96565443335525,0.590789906681404,0,0.614942192715568,0.171567810298526,0,0,0,0.277765335475589,0.325808305310325,0,0,0,0,0.144366447761074,0.462985512576611,0.190254152234598,0.790204397959275,0,0.492434012174795,0,0.445893486866185,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0.088048434013226,1.24396869324463,1.29707958075265,1.38866676769018,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0.791951872933429,0,0,0.299918973546171,1.2162378064119,0.502257091432126,2.10833939483032,0.479249710983165,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0.591092280605782,1.50939302401662,0.513372145118994,0.254094624222463,0,0,0.167516265334349,0,5.99205619157746,29.9161459204025,6.21623270154053,0.24538298343828,1.50051156317903,0.813795071099207,0.415941723061614,1.07057393278297,0,0.234282829985426,0,2.27407504055985,1.03473071292505,0,0,0.173767228936166,0.195801157462741,0,0,1.50999940573032,1.06727557803444,0,0,0,0,0,0.561320188866147,0.128139149255701,0,0.160853921143607,1.48418066444991,0.462629081407967,0.177561725313127,0.0821271560138091,3.63478100428535,0.813472649219715,0.362578348774867,0.601519410909855,0.276242966807689,0.574072240823034,0.728364672026868,0.393373244878272,0.451199612907412,0.231046011313244,0.784349769176855,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,0.103041011647722,0.27470839445503,0,0.574265537996172,0,0,0.580024309752732,0,0.15350367472613,0.275673144969061,0.537101224341368,0.435050081742686,0.511359764496605,0.445160178233687,0.165284915360978,0.384380134730212,0.127612712494584,0.6069466851333,0,0,0,0,1.06461206063404,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,1.56989728039846,0.359744915166629,0,0.471249609382746,0.404364963146632,0,0,0,0.243713489631284,2.11300293513511,0,1.97967604735198,0,0,1.32687795048244,1.75380354101505,0,0,0.405820753925408,0.92947049429925,0.563391205064483,0.143411352204052,0.0982490410131212,0,0.354761064070598,0.633322905892992,1.31717957183961,0.379473173765715,0.699869440489966,0.0962221127255121,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,1.70894156152249,0.476463550915578,0,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| ||
|short_description=p12@BCL3 | |short_description=p12@BCL3 | ||
}} | }} |
Latest revision as of 14:07, 18 September 2015
Short description: | p12@BCL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_BCL3_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -49bp_to_ENST00000444487_5end |
EntrezGene: | BCL3 |
HGNC: | 998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.00e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.00e-53 | 42 |
defensive cell | 4.23e-51 | 48 |
phagocyte | 4.23e-51 | 48 |
myeloid leukocyte | 1.11e-45 | 72 |
granulocyte monocyte progenitor cell | 7.22e-44 | 67 |
macrophage dendritic cell progenitor | 7.61e-42 | 61 |
myeloid lineage restricted progenitor cell | 6.38e-40 | 66 |
monopoietic cell | 1.16e-38 | 59 |
monocyte | 1.16e-38 | 59 |
monoblast | 1.16e-38 | 59 |
promonocyte | 1.16e-38 | 59 |
myeloid cell | 3.99e-31 | 108 |
common myeloid progenitor | 3.99e-31 | 108 |
leukocyte | 1.35e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 3.13e-23 | 120 |
nongranular leukocyte | 9.47e-21 | 115 |
hematopoietic stem cell | 1.68e-20 | 168 |
hematopoietic oligopotent progenitor cell | 8.13e-20 | 161 |
hematopoietic multipotent progenitor cell | 8.13e-20 | 161 |
hematopoietic cell | 1.03e-19 | 177 |
connective tissue cell | 8.75e-13 | 361 |
mesenchymal cell | 1.06e-12 | 354 |
multi fate stem cell | 4.88e-11 | 427 |
somatic stem cell | 1.23e-10 | 433 |
motile cell | 4.05e-10 | 386 |
stem cell | 4.07e-10 | 441 |
neutrophil | 1.81e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.39e-39 | 76 |
bone element | 1.33e-35 | 82 |
skeletal element | 3.55e-33 | 90 |
hematopoietic system | 8.16e-33 | 98 |
blood island | 8.16e-33 | 98 |
skeletal system | 3.02e-30 | 100 |
immune system | 5.40e-30 | 93 |
hemolymphoid system | 1.30e-28 | 108 |
musculoskeletal system | 2.43e-22 | 167 |
lateral plate mesoderm | 1.24e-18 | 203 |
mesoderm | 2.05e-12 | 315 |
mesoderm-derived structure | 2.05e-12 | 315 |
presumptive mesoderm | 2.05e-12 | 315 |
connective tissue | 5.60e-12 | 371 |