FFCP PHASE1:Hg19::chr11:60719430..60719439,-: Difference between revisions
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|id=chr11:60719430..60719439,-
|short_description=p24@SLC15A3
|description=CAGE_peak_24_at_SLC15A3_5end
|association_with_transcript=-173bp_to_ENST00000227880,NM_01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51296 | |EntrezGene=51296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18068 | |HGNC=18068 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IY34 | |UniProt=Q8IY34 | ||
|association_with_transcript=-173bp_to_ENST00000227880,NM_016582,NR_027391,uc001nqn.2,uc001nqo.2_5end | |||
|cluster_id=chr11:60719430..60719439,- | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_24_at_SLC15A3_5end | |||
|id=chr11:60719430..60719439,- | |||
|ontology_enrichment_celltype=CL:0000766!1.39e-27!76;CL:0002194!5.02e-25!63;CL:0000576!5.02e-25!63;CL:0000040!5.02e-25!63;CL:0000559!5.02e-25!63;CL:0002009!3.91e-24!65;CL:0000839!3.98e-22!70;CL:0000557!9.28e-22!71;CL:0000763!3.40e-17!112;CL:0000049!3.40e-17!112;CL:0000738!1.10e-15!140;CL:0002087!3.03e-14!119;CL:0000037!8.54e-12!172;CL:0000566!8.54e-12!172;CL:0000988!7.33e-11!182;CL:0002031!1.03e-10!124;CL:0002057!2.31e-10!42;CL:0002032!3.91e-10!165;CL:0000837!3.91e-10!165;CL:0000860!1.50e-09!45;CL:0000235!7.86e-09!10;CL:0000840!1.94e-08!5;CL:0001029!1.94e-08!5;CL:0002619!6.35e-08!3;CL:0000767!1.34e-07!3;CL:0000842!1.53e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000235;7.07e-34;6!CL:0000840;9.87e-34;5!CL:0000990;6.41e-23;8!CL:0000451;5.63e-19;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,7.07e-34,6;CL:0000840,9.87e-34,5;CL:0001029,9.87e-34,5;CL:0000990,6.41e-23,8;CL:0000451,5.63e-19,10;CL:0002194,4.87e-14,59;CL:0000576,4.87e-14,59;CL:0000040,4.87e-14,59;CL:0000559,4.87e-14,59;CL:0002009,1.29e-13,61;CL:0000839,1.15e-12,66;CL:0000557,1.71e-12,67;CL:0000766,1.07e-11,72;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.89e-19!102;UBERON:0003061!2.89e-19!102;UBERON:0002371!7.41e-19!80;UBERON:0001474!2.95e-17!86;UBERON:0002193!4.06e-17!112;UBERON:0004765!4.37e-14!101;UBERON:0001434!4.37e-14!101;UBERON:0002405!2.50e-13!115;UBERON:0003081!3.35e-10!216;UBERON:0002204!6.29e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0002405,2.87e-09,93;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0001434,1.11e-08,100;UBERON:0002193,4.22e-08,108 | |||
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|short_description=p24@SLC15A3 | |||
}} | }} |
Latest revision as of 14:43, 18 September 2015
Short description: | p24@SLC15A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SLC15A3_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -173bp_to_ENST00000227880, NM_016582, NR_027391, uc001nqn.2, uc001nqo.2_5end |
EntrezGene: | SLC15A3 |
HGNC: | 18068 |
UniProt: | Q8IY34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 7.07e-34 | 6 |
immature conventional dendritic cell | 9.87e-34 | 5 |
common dendritic progenitor | 9.87e-34 | 5 |
conventional dendritic cell | 6.41e-23 | 8 |
dendritic cell | 5.63e-19 | 10 |
monopoietic cell | 4.87e-14 | 59 |
monocyte | 4.87e-14 | 59 |
monoblast | 4.87e-14 | 59 |
promonocyte | 4.87e-14 | 59 |
macrophage dendritic cell progenitor | 1.29e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.15e-12 | 66 |
granulocyte monocyte progenitor cell | 1.71e-12 | 67 |
myeloid leukocyte | 1.07e-11 | 72 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
immune system | 2.87e-09 | 93 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
skeletal system | 1.11e-08 | 100 |
hemolymphoid system | 4.22e-08 | 108 |