FFCP PHASE1:Hg19::chr4:75089803..75089822,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=441024 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31865 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000461856,uc003hhu.2_5end | |||
|cluster_id=chr4:75089803..75089822,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_MTHFD2L_5end | |||
|id=chr4:75089803..75089822,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.29e-50!42;CL:0000860!4.01e-46!45;CL:0002194!3.32e-34!63;CL:0000576!3.32e-34!63;CL:0000040!3.32e-34!63;CL:0000559!3.32e-34!63;CL:0002009!7.15e-33!65;CL:0000839!7.16e-30!70;CL:0000557!2.54e-29!71;CL:0000766!1.04e-28!76;CL:0000763!8.53e-18!112;CL:0000049!8.53e-18!112;CL:0002087!3.10e-17!119;CL:0002031!4.14e-15!124;CL:0000738!3.04e-14!140;CL:0002032!9.23e-11!165;CL:0000837!9.23e-11!165;CL:0000037!1.12e-10!172;CL:0000566!1.12e-10!172;CL:0000988!2.57e-10!182;CL:0000048!1.35e-08!430;CL:0000723!2.85e-08!436;CL:0000134!7.47e-08!358;CL:0000034!7.47e-08!444;CL:0000219!1.67e-07!390;CL:0002320!1.86e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.22e-116;33!CL:0002057;8.22e-116;33!CL:0000473;7.96e-82;39!CL:0000234;7.96e-82;39!CL:0000576;2.67e-54;48!CL:0000766;2.18e-29;69!CL:0000763;5.64e-18;100!CL:0002087;2.16e-15;104!CL:0000738;5.74e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.02e-102,42;CL:0002057,2.02e-102,42;CL:0000473,4.04e-89,48;CL:0000234,4.04e-89,48;CL:0002194,1.72e-70,59;CL:0000576,1.72e-70,59;CL:0000040,1.72e-70,59;CL:0000559,1.72e-70,59;CL:0002009,4.36e-68,61;CL:0000839,1.06e-62,66;CL:0000557,1.01e-61,67;CL:0000766,3.26e-57,72;CL:0000763,3.77e-40,108;CL:0000049,3.77e-40,108;CL:0002087,1.84e-34,115;CL:0002031,7.29e-33,120;CL:0000738,1.57e-28,136;CL:0002032,1.30e-25,161;CL:0000837,1.30e-25,161;CL:0000037,2.27e-24,168;CL:0000988,6.45e-23,177;CL:0000134,2.96e-10,354;CL:0002320,5.75e-10,361;CL:0000219,6.01e-09,386;CL:0000048,1.07e-07,427;CL:0000723,1.59e-07,433;CL:0000034,2.66e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.98e-77;42!CL:0000049;3.40e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.03e-26!80;UBERON:0001474!3.39e-24!86;UBERON:0002390!1.25e-21!102;UBERON:0003061!1.25e-21!102;UBERON:0004765!1.38e-20!101;UBERON:0001434!1.38e-20!101;UBERON:0002193!4.17e-20!112;UBERON:0002405!6.37e-17!115;UBERON:0002204!1.22e-15!167;UBERON:0003081!5.67e-12!216;UBERON:0002119!1.03e-09!4;UBERON:0004531!1.03e-09!4;UBERON:0000926!3.72e-07!448;UBERON:0004120!3.72e-07!448;UBERON:0006603!3.72e-07!448;UBERON:0002384!6.39e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.00e-54,76;UBERON:0001474,7.98e-50,82;UBERON:0004765,4.43e-45,90;UBERON:0002405,1.65e-43,93;UBERON:0002390,4.22e-41,98;UBERON:0003061,4.22e-41,98;UBERON:0001434,3.33e-40,100;UBERON:0002193,6.03e-37,108;UBERON:0002204,1.79e-22,167;UBERON:0003081,9.72e-18,203;UBERON:0000926,5.97e-11,315;UBERON:0004120,5.97e-11,315;UBERON:0006603,5.97e-11,315;UBERON:0002384,1.43e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0,0,0.581592955118259,0,0,3.71886459049095,4.52284676824008,3.71647645074124,16.3984663623626,8.19714260893122,9.69577142543199,4.48169384957604,2.5819387343353,1.35426486594342,1.88242339542605,1.36453075028923,2.47195832889593,4.89734227793444,4.8139354061414,2.55734850319616,4.28806690242731,0.997318288108159,0.426224750532694,11.0279510678862,13.0498601678962,20.553134216854,5.52747063564835,6.77927793946262,6.73285418585862,17.5565855763677,15.4676607114777,15.5066569846033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0.869932992075073,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,0.160317640503067,0,0,0,0,0,0,0.248505071130865,0,0,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60579228797655,0,0,0,0,0,0,0,0,1.06720276974141,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.686520205190771,0,0.15543720058278,0.295710299979268,0.159296767163702,1.34940933649081,0.155262956876259,0.414706207840855,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p6@MTHFD2L | |||
}} |
Latest revision as of 15:36, 18 September 2015
Short description: | p6@MTHFD2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MTHFD2L_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 18bp_to_ENST00000461856, uc003hhu.2_5end |
EntrezGene: | MTHFD2L |
HGNC: | 31865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.02e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.02e-102 | 42 |
defensive cell | 4.04e-89 | 48 |
phagocyte | 4.04e-89 | 48 |
monopoietic cell | 1.72e-70 | 59 |
monocyte | 1.72e-70 | 59 |
monoblast | 1.72e-70 | 59 |
promonocyte | 1.72e-70 | 59 |
macrophage dendritic cell progenitor | 4.36e-68 | 61 |
myeloid lineage restricted progenitor cell | 1.06e-62 | 66 |
granulocyte monocyte progenitor cell | 1.01e-61 | 67 |
myeloid leukocyte | 3.26e-57 | 72 |
myeloid cell | 3.77e-40 | 108 |
common myeloid progenitor | 3.77e-40 | 108 |
nongranular leukocyte | 1.84e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 7.29e-33 | 120 |
leukocyte | 1.57e-28 | 136 |
hematopoietic oligopotent progenitor cell | 1.30e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.30e-25 | 161 |
hematopoietic stem cell | 2.27e-24 | 168 |
hematopoietic cell | 6.45e-23 | 177 |
mesenchymal cell | 2.96e-10 | 354 |
connective tissue cell | 5.75e-10 | 361 |
motile cell | 6.01e-09 | 386 |
multi fate stem cell | 1.07e-07 | 427 |
somatic stem cell | 1.59e-07 | 433 |
stem cell | 2.66e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.00e-54 | 76 |
bone element | 7.98e-50 | 82 |
skeletal element | 4.43e-45 | 90 |
immune system | 1.65e-43 | 93 |
hematopoietic system | 4.22e-41 | 98 |
blood island | 4.22e-41 | 98 |
skeletal system | 3.33e-40 | 100 |
hemolymphoid system | 6.03e-37 | 108 |
musculoskeletal system | 1.79e-22 | 167 |
lateral plate mesoderm | 9.72e-18 | 203 |
mesoderm | 5.97e-11 | 315 |
mesoderm-derived structure | 5.97e-11 | 315 |
presumptive mesoderm | 5.97e-11 | 315 |
connective tissue | 1.43e-09 | 371 |