FFCP PHASE1:Hg19::chr8:60031563..60031574,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:60031563..60031574,-
|short_description=p7@TOX
|description=CAGE_peak_7_at_TOX_5end
|association_with_transcript=192bp_to_ENST00000361421,ENST00000456290,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9760 | |EntrezGene=9760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18988 | |HGNC=18988 | ||
|TSSclassifier=strong | |||
|UniProt=O94900,B4DYA1 | |UniProt=O94900,B4DYA1 | ||
|association_with_transcript=192bp_to_ENST00000361421,ENST00000456290,NM_014729,uc003xtw.1_5end | |||
|cluster_id=chr8:60031563..60031574,- | |||
|coexpression_cluster_id=C4765 | |||
|description=CAGE_peak_7_at_TOX_5end | |||
|id=chr8:60031563..60031574,- | |||
|ontology_enrichment_celltype=CL:0000791!4.34e-16!18;CL:0000789!4.34e-16!18;CL:0002420!4.34e-16!18;CL:0002419!4.34e-16!18;CL:0000790!4.34e-16!18;CL:0000084!7.20e-16!25;CL:0000827!7.20e-16!25;CL:0000838!6.89e-12!52;CL:0000542!1.99e-11!53;CL:0000051!1.99e-11!53;CL:0000625!2.55e-10!11;CL:0000624!9.54e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.42e-33;18!CL:0000789;5.42e-33;18!CL:0002419;5.42e-33;18!CL:0000084;3.90e-32;25!CL:0000625;4.89e-19;11!CL:0000624;4.97e-14;6!CL:0000542;4.03e-09;53!CL:0000898;2.06e-08;3!CL:0000623;2.88e-08;3!CL:0000226;3.53e-07;3!CL:0000842;3.53e-07;3!CL:0000767;4.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.32e-33,18;CL:0000789,6.32e-33,18;CL:0002420,6.32e-33,18;CL:0002419,6.32e-33,18;CL:0000790,6.32e-33,18;CL:0000084,4.41e-32,25;CL:0000827,4.41e-32,25;CL:0000625,3.85e-19,11;CL:0000838,1.61e-17,52;CL:0000542,4.59e-17,53;CL:0000051,4.59e-17,53;CL:0000037,3.80e-16,168;CL:0000988,1.03e-14,177;CL:0000624,5.48e-14,6;CL:0002032,1.78e-12,161;CL:0000837,1.78e-12,161;CL:0000738,1.97e-12,136;CL:0002087,1.17e-08,115;CL:0000898,2.07e-08,3;CL:0000623,2.76e-08,3;CL:0000825,2.76e-08,3;CL:0002031,6.52e-08,120;CL:0000226,2.04e-07,3;CL:0000842,2.04e-07,3;CL:0000767,5.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.42e-33;18!CL:0000051;4.03e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.74e-19!115;UBERON:0000956!5.51e-12!25;UBERON:0000203!5.51e-12!25;UBERON:0001049!2.07e-11!57;UBERON:0005068!2.07e-11!57;UBERON:0006241!2.07e-11!57;UBERON:0007135!2.07e-11!57;UBERON:0001950!5.34e-11!20;UBERON:0002780!7.42e-11!41;UBERON:0001890!7.42e-11!41;UBERON:0006240!7.42e-11!41;UBERON:0001893!8.64e-11!34;UBERON:0002020!1.28e-10!34;UBERON:0003528!1.28e-10!34;UBERON:0002619!1.43e-10!22;UBERON:0003080!2.32e-10!42;UBERON:0001869!2.54e-10!32;UBERON:0002791!2.99e-10!33;UBERON:0003075!6.77e-10!86;UBERON:0007284!6.77e-10!86;UBERON:0003056!2.45e-09!61;UBERON:0002616!3.07e-09!59;UBERON:0001017!7.25e-09!82;UBERON:0002346!8.29e-09!90;UBERON:0005743!2.02e-08!86;UBERON:0000955!2.23e-08!69;UBERON:0006238!2.23e-08!69;UBERON:0000153!2.30e-08!129;UBERON:0007811!2.30e-08!129;UBERON:0000073!1.15e-07!94;UBERON:0001016!1.15e-07!94;UBERON:0000178!3.87e-07!15;UBERON:0000179!3.87e-07!15;UBERON:0000463!3.87e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.86e-12;15!UBERON:0000179;2.86e-12;15!UBERON:0000463;2.86e-12;15!UBERON:0002390;3.08e-12;32!UBERON:0002193;2.27e-08;42!UBERON:0004177;1.12e-07;5!UBERON:0005057;1.12e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.56e-12,15;UBERON:0000179,1.56e-12,15;UBERON:0000463,1.56e-12,15;UBERON:0004177,1.59e-11,7;UBERON:0005057,1.59e-11,7;UBERON:0002370,4.09e-10,4;UBERON:0005058,4.09e-10,4;UBERON:0009113,4.09e-10,4;UBERON:0003295,4.09e-10,4;UBERON:0005562,4.09e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0.572471974262113,0.410623275218653,0.627713197974014,0,0,0,1.18009283054671,2.30297638858328,2.47705797305722,0,0,0,0,0.710846162437108,3.22960483268332,1.10799081706375,1.40381113229099,1.08505435357926,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.382273228125229,5.28685314316103,5.04457706683382,0.263384084775077,3.14735632182133,1.17903228824749,3.90642848099067,1.00311897234407,5.21475626613745,2.36723902867367,1.94826728407911,2.78526142212934,8.83817722424511,7.97522020501036,9.20733136801053,1.0247305578054,0.650296737799391,7.5641436117691,6.07970039128866,5.21645554323094,1.92772532110679,3.74557159325598,4.18142095219907,2.26618685395132,7.66440987203842,6.18529401868734,7.59059076058509,3.50421955756506,0.651083453856419,2.85135613334512,1.50575119077773,2.43174561193395,3.74792179657038,5.6826540490564,4.10563998460523,3.83052812126992,2.40696176205157,3.47578569318718,0,0,0,0,0,0,0,0,0.472674085820339,0.221729397462564,0.43917392846563,0.196468613246569,0,0,0,0.348259474598534,0,0.238490624305342,0,0,0.39752481473341,0,0,0,0,1.10047216776027,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0,0,0,0.612975591598039,0,0,0.358779271377724,0.427114777637135,0,0.300091096084402,0.309157587715317,0.772921620136887,0.37223371266318,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1268191812688,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,0.704387472105808,2.28060927094849,0.720599767084807,1.00993946741104,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,1.00876629594175,7.88123040807709,6.68445482064504,4.2353201972317,0.508189248444927,1.30139853857622,0,0,0,0.749007023947182,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,2.89475236572042,1.72571360654893,3.94891963872744,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0.451199612907412,0.231046011313244,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0.188287601553558,0,0,0,0,1.52234282769651,0.764637207142375,1.70894156152249,1.19115887728894,3.70226045777575,1.29694662238543,1.08006287447623,0,0,0,0,0,0,3.62823401076912,6.69590345461054,20.9558340004457,6.12817184423573,10.795352718918,0.324621940274555,0,0,0,5.01268954180134,10.4960902236994,0,0,0,0,0,0,0,0,0,1.23087398947712,0,2.66457574398256,0,0.37428108081644,0.439524537815682,0.121360521749513,0,0,0,0,0,0,0.281338832821026,0,0,0,0,3.59169090190492,0,0.511343412510774,0,0,0.0898683511473268,0,0,0.0986434056369336,4.7896618469388,1.11136990144637,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0.557694977114413,0,0,0,0,0,0.31900115973192,0,0,5.10966490978682,3.29658538429552,0.498635045700469,0,0,0,0,0.635746315921515,0,0,0,0,0,0.619202951523374,1.83309043480088,0,0,0.313265848516366,0.134802265961354,0,0.468528891450678,0.364909578431332,0,0,1.18375320854817,2.41981432097328,0.61214552326098,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.569797163602908,0,0,0.640358984218058,0,0.144090417154106,0.572682980829578,0.171594997861965,0.14405479798815,0,0,0.407712618220842,0.418411385249333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0.546746009922222,0,0.315222829196793,0.314727528809989,0,0,0.575745591958336,0,0,0,0,0,0,1.19730191562487,0,0,0,0.293104467356165,0,0.129282956361551,0.39669780522807,0,0,0.320362237703084,0.471612915298998,0.414239055347196,1.48849806543585,0,0.121792598380896,0,0,0,0,0,0,0.886068179966986,0.854183854313742,0.3755727921195,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,1.13352962756136,0,0.244736704506468,0,0,0,0,0,0,0.512483037175893,0,0.303859956177382,0.691292180758654,0,0,0,0,0.245772908753719,0.211312123358627,0.999936979274649,0,0,0,0,0,1.24415452006595,0.127894371303652,0.323474434190045,0,0,0,0,0,0,0.318004350653419,0.630893960010027,0,0,0,0.0642292250964595,1.41696576325585,0.957803154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| ||
|short_description=p7@TOX | |||
}} | }} |
Latest revision as of 16:11, 18 September 2015
Short description: | p7@TOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TOX_5end |
Coexpression cluster: | C4765_Hodgkin_acute_thymus_chronic_CD4_Mast_Natural |
Association with transcript: | 192bp_to_ENST00000361421, ENST00000456290, NM_014729, uc003xtw.1_5end |
EntrezGene: | TOX |
HGNC: | 18988 |
UniProt: | O94900B4DYA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 6.32e-33 | 18 |
alpha-beta T cell | 6.32e-33 | 18 |
immature T cell | 6.32e-33 | 18 |
mature T cell | 6.32e-33 | 18 |
immature alpha-beta T cell | 6.32e-33 | 18 |
T cell | 4.41e-32 | 25 |
pro-T cell | 4.41e-32 | 25 |
CD8-positive, alpha-beta T cell | 3.85e-19 | 11 |
lymphoid lineage restricted progenitor cell | 1.61e-17 | 52 |
lymphocyte | 4.59e-17 | 53 |
common lymphoid progenitor | 4.59e-17 | 53 |
hematopoietic stem cell | 3.80e-16 | 168 |
hematopoietic cell | 1.03e-14 | 177 |
CD4-positive, alpha-beta T cell | 5.48e-14 | 6 |
hematopoietic oligopotent progenitor cell | 1.78e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-12 | 161 |
leukocyte | 1.97e-12 | 136 |
nongranular leukocyte | 1.17e-08 | 115 |
naive T cell | 2.07e-08 | 3 |
natural killer cell | 2.76e-08 | 3 |
pro-NK cell | 2.76e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 6.52e-08 | 120 |
single nucleate cell | 2.04e-07 | 3 |
mononuclear cell | 2.04e-07 | 3 |
basophil | 5.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.56e-12 | 15 |
haemolymphatic fluid | 1.56e-12 | 15 |
organism substance | 1.56e-12 | 15 |
hemopoietic organ | 1.59e-11 | 7 |
immune organ | 1.59e-11 | 7 |
thymus | 4.09e-10 | 4 |
hemolymphoid system gland | 4.09e-10 | 4 |
thymic region | 4.09e-10 | 4 |
pharyngeal gland | 4.09e-10 | 4 |
thymus primordium | 4.09e-10 | 4 |