FFCP PHASE1:Hg19::chr3:49395773..49395819,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2876 | |EntrezGene=2876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4553 | |HGNC=4553 | ||
|TSSclassifier=strong | |||
|UniProt=P07203 | |UniProt=P07203 | ||
|association_with_transcript=0bp_to_NM_000581,NM_201397,uc011bcl.1,uc011bcm.1_5end | |association_with_transcript=0bp_to_NM_000581,NM_201397,uc011bcl.1,uc011bcm.1_5end | ||
|cluster_id=chr3:49395773..49395819,- | |||
|coexpression_cluster_id=C385 | |||
|description=CAGE_peak_1_at_GPX1_5end | |description=CAGE_peak_1_at_GPX1_5end | ||
|id=chr3:49395773..49395819,- | |id=chr3:49395773..49395819,- | ||
|ontology_enrichment_celltype=CL:0000055!5.20e-20!180;CL:0000220!1.86e-19!246;CL:0002321!2.00e-19!248;CL:0000393!5.03e-16!60;CL:0000211!5.03e-16!60;CL:0000183!1.75e-15!59;CL:0000680!4.37e-15!57;CL:0000056!4.37e-15!57;CL:0000355!4.37e-15!57;CL:0000187!2.60e-14!54;CL:0000222!2.10e-11!119;CL:0000192!3.12e-11!42;CL:0000514!3.12e-11!42;CL:0002371!9.93e-11!591;CL:0000144!6.09e-10!625;CL:0000221!1.71e-08!71;CL:0000359!2.11e-08!32;CL:1000449!6.11e-08!16;CL:1000497!1.14e-07!18;CL:0002518!1.14e-07!18;CL:0002077!2.44e-07!33;CL:1000507!3.22e-07!12;CL:1000494!3.22e-07!12;CL:0000548!3.69e-07!679;CL:0000004!3.69e-07!679;CL:0000255!3.69e-07!679 | |ontology_enrichment_celltype=CL:0000055!5.20e-20!180;CL:0000220!1.86e-19!246;CL:0002321!2.00e-19!248;CL:0000393!5.03e-16!60;CL:0000211!5.03e-16!60;CL:0000183!1.75e-15!59;CL:0000680!4.37e-15!57;CL:0000056!4.37e-15!57;CL:0000355!4.37e-15!57;CL:0000187!2.60e-14!54;CL:0000222!2.10e-11!119;CL:0000192!3.12e-11!42;CL:0000514!3.12e-11!42;CL:0002371!9.93e-11!591;CL:0000144!6.09e-10!625;CL:0000221!1.71e-08!71;CL:0000359!2.11e-08!32;CL:1000449!6.11e-08!16;CL:1000497!1.14e-07!18;CL:0002518!1.14e-07!18;CL:0002077!2.44e-07!33;CL:1000507!3.22e-07!12;CL:1000494!3.22e-07!12;CL:0000548!3.69e-07!679;CL:0000004!3.69e-07!679;CL:0000255!3.69e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000187;7.39e-09;55!CL:0000192;1.12e-08;43!CL:0000393;1.16e-08;61!CL:0000211;1.16e-08;61!CL:0000359;6.05e-08;32!CL:1000449;1.89e-07;15!CL:1000497;3.12e-07;17!CL:0002518;3.12e-07;17!CL:0002077;3.85e-07;34!CL:1000507;6.37e-07;10!CL:1000494;6.37e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.74e-20,250;CL:0000393,1.67e-16,61;CL:0000211,1.67e-16,61;CL:0000680,1.47e-15,58;CL:0000056,1.47e-15,58;CL:0000355,1.47e-15,58;CL:0000187,8.76e-15,55;CL:0000222,8.17e-12,121;CL:0000192,1.08e-11,43;CL:0000514,1.08e-11,43;CL:0000221,6.43e-09,72;CL:0000359,2.11e-08,32;CL:0002077,7.50e-08,34;CL:1000449,1.91e-07,15;CL:1000497,3.51e-07,17;CL:0002518,3.51e-07,17;CL:1000507,6.31e-07,10;CL:1000494,6.31e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000355;4.95e-09;58!CL:0000514;1.12e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!9.76e-19!83;UBERON:0002329!9.76e-19!83;UBERON:0003077!9.76e-19!83;UBERON:0003059!9.76e-19!83;UBERON:0007282!9.76e-19!83;UBERON:0009618!9.76e-19!83;UBERON:0007285!9.76e-19!83;UBERON:0005256!5.47e-18!143;UBERON:0000486!8.41e-18!82;UBERON:0004290!1.03e-15!70;UBERON:0000481!7.48e-14!347;UBERON:0001134!7.96e-13!61;UBERON:0002036!7.96e-13!61;UBERON:0003082!7.96e-13!61;UBERON:0002100!7.99e-13!216;UBERON:0002385!3.47e-12!63;UBERON:0001015!3.47e-12!63;UBERON:0000383!3.47e-12!63;UBERON:0000119!4.94e-12!312;UBERON:0000483!6.01e-12!309;UBERON:0003104!1.54e-11!238;UBERON:0009142!1.54e-11!238;UBERON:0000475!4.23e-11!365;UBERON:0000490!2.15e-08!138;UBERON:0003914!2.54e-08!118;UBERON:0004211!6.11e-08!16;UBERON:0001285!6.11e-08!16;UBERON:0007684!6.11e-08!16;UBERON:0003220!6.11e-08!16;UBERON:0004208!6.11e-08!16;UBERON:0005085!1.56e-07!29;UBERON:0006555!1.72e-07!17;UBERON:0005103!1.72e-07!17;UBERON:0000083!1.72e-07!17;UBERON:0009201!1.72e-07!17;UBERON:0004819!1.72e-07!17;UBERON:0006553!1.72e-07!17;UBERON:0003074!1.72e-07!17;UBERON:0003060!1.72e-07!17;UBERON:0009773!3.22e-07!12;UBERON:0001231!3.22e-07!12;UBERON:0004810!3.22e-07!12;UBERON:0000080!4.82e-07!18;UBERON:0002120!4.82e-07!18;UBERON:0004875!4.82e-07!18;UBERON:0005721!4.82e-07!18;UBERON:0005754!4.82e-07!18;UBERON:0007297!4.82e-07!18 | |ontology_enrichment_uberon=UBERON:0000914!9.76e-19!83;UBERON:0002329!9.76e-19!83;UBERON:0003077!9.76e-19!83;UBERON:0003059!9.76e-19!83;UBERON:0007282!9.76e-19!83;UBERON:0009618!9.76e-19!83;UBERON:0007285!9.76e-19!83;UBERON:0005256!5.47e-18!143;UBERON:0000486!8.41e-18!82;UBERON:0004290!1.03e-15!70;UBERON:0000481!7.48e-14!347;UBERON:0001134!7.96e-13!61;UBERON:0002036!7.96e-13!61;UBERON:0003082!7.96e-13!61;UBERON:0002100!7.99e-13!216;UBERON:0002385!3.47e-12!63;UBERON:0001015!3.47e-12!63;UBERON:0000383!3.47e-12!63;UBERON:0000119!4.94e-12!312;UBERON:0000483!6.01e-12!309;UBERON:0003104!1.54e-11!238;UBERON:0009142!1.54e-11!238;UBERON:0000475!4.23e-11!365;UBERON:0000490!2.15e-08!138;UBERON:0003914!2.54e-08!118;UBERON:0004211!6.11e-08!16;UBERON:0001285!6.11e-08!16;UBERON:0007684!6.11e-08!16;UBERON:0003220!6.11e-08!16;UBERON:0004208!6.11e-08!16;UBERON:0005085!1.56e-07!29;UBERON:0006555!1.72e-07!17;UBERON:0005103!1.72e-07!17;UBERON:0000083!1.72e-07!17;UBERON:0009201!1.72e-07!17;UBERON:0004819!1.72e-07!17;UBERON:0006553!1.72e-07!17;UBERON:0003074!1.72e-07!17;UBERON:0003060!1.72e-07!17;UBERON:0009773!3.22e-07!12;UBERON:0001231!3.22e-07!12;UBERON:0004810!3.22e-07!12;UBERON:0000080!4.82e-07!18;UBERON:0002120!4.82e-07!18;UBERON:0004875!4.82e-07!18;UBERON:0005721!4.82e-07!18;UBERON:0005754!4.82e-07!18;UBERON:0007297!4.82e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.89e-07;15!UBERON:0004819;1.89e-07;15!UBERON:0001285;1.89e-07;15!UBERON:0007684;1.89e-07;15!UBERON:0004211;6.37e-07;10!UBERON:0009773;6.37e-07;10!UBERON:0001231;6.37e-07;10!UBERON:0004810;6.37e-07;10!UBERON:0010371;8.43e-07;31 | |||
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| ||
|short_description=p1@GPX1 | |short_description=p1@GPX1 | ||
}} | }} |
Latest revision as of 16:38, 18 September 2015
Short description: | p1@GPX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPX1_5end |
Coexpression cluster: | C385_Mesenchymal_Alveolar_Osteoblast_Smooth_Renal_Placental_Fibroblast |
Association with transcript: | 0bp_to_NM_000581, NM_201397, uc011bcl.1, uc011bcm.1_5end |
EntrezGene: | GPX1 |
HGNC: | 4553 |
UniProt: | P07203 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.74e-20 | 250 |
electrically responsive cell | 1.67e-16 | 61 |
electrically active cell | 1.67e-16 | 61 |
muscle precursor cell | 1.47e-15 | 58 |
myoblast | 1.47e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.47e-15 | 58 |
muscle cell | 8.76e-15 | 55 |
mesodermal cell | 8.17e-12 | 121 |
smooth muscle cell | 1.08e-11 | 43 |
smooth muscle myoblast | 1.08e-11 | 43 |
ectodermal cell | 6.43e-09 | 72 |
vascular associated smooth muscle cell | 2.11e-08 | 32 |
ecto-epithelial cell | 7.50e-08 | 34 |
epithelial cell of nephron | 1.91e-07 | 15 |
kidney cell | 3.51e-07 | 17 |
kidney epithelial cell | 3.51e-07 | 17 |
kidney tubule cell | 6.31e-07 | 10 |
nephron tubule epithelial cell | 6.31e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.87e-18 | 83 |
epithelial vesicle | 3.52e-18 | 78 |
somite | 3.57e-16 | 71 |
presomitic mesoderm | 3.57e-16 | 71 |
presumptive segmental plate | 3.57e-16 | 71 |
dermomyotome | 3.57e-16 | 71 |
trunk paraxial mesoderm | 3.57e-16 | 71 |
paraxial mesoderm | 4.87e-16 | 72 |
presumptive paraxial mesoderm | 4.87e-16 | 72 |
dense mesenchyme tissue | 6.24e-16 | 73 |
skeletal muscle tissue | 2.86e-13 | 62 |
striated muscle tissue | 2.86e-13 | 62 |
myotome | 2.86e-13 | 62 |
muscle tissue | 1.28e-12 | 64 |
musculature | 1.28e-12 | 64 |
musculature of body | 1.28e-12 | 64 |
cell layer | 2.20e-12 | 309 |
mesenchyme | 2.56e-12 | 160 |
entire embryonic mesenchyme | 2.56e-12 | 160 |
epithelium | 2.67e-12 | 306 |
trunk mesenchyme | 6.21e-12 | 122 |
unilaminar epithelium | 7.68e-11 | 148 |
trunk | 1.05e-10 | 199 |
epithelial tube | 5.13e-08 | 117 |
nephron epithelium | 1.91e-07 | 15 |
renal tubule | 1.91e-07 | 15 |
nephron tubule | 1.91e-07 | 15 |
nephron | 1.91e-07 | 15 |
uriniferous tubule | 1.91e-07 | 15 |
nephrogenic mesenchyme | 1.91e-07 | 15 |
ectodermal placode | 3.72e-07 | 31 |
excretory tube | 5.29e-07 | 16 |
kidney epithelium | 5.29e-07 | 16 |
nephron tubule epithelium | 6.31e-07 | 10 |