FFCP PHASE1:Hg19::chr19:45971060..45971122,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2354 | |EntrezGene=2354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3797 | |HGNC=3797 | ||
|TSSclassifier=strong | |||
|UniProt=P53539,E9PHJ3,E7EPR6,E7EXA9,A8VJE1 | |UniProt=P53539,E9PHJ3,E7EPR6,E7EXA9,A8VJE1 | ||
|association_with_transcript=-130bp_to_ENST00000353609,ENST00000417353,ENST00000443841,ENST00000455928,NM_001114171,NM_006732,uc002pbw.2,uc002pbx.3,uc002pby.3,uc010eka.1,uc010ekb.1,uc010ekc.1,uc010ekd.1,uc010eke.2,uc010ekf.2,uc010ekg.2_5end | |association_with_transcript=-130bp_to_ENST00000353609,ENST00000417353,ENST00000443841,ENST00000455928,NM_001114171,NM_006732,uc002pbw.2,uc002pbx.3,uc002pby.3,uc010eka.1,uc010ekb.1,uc010ekc.1,uc010ekd.1,uc010eke.2,uc010ekf.2,uc010ekg.2_5end | ||
|cluster_id=chr19:45971060..45971122,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_FOSB_5end | |description=CAGE_peak_3_at_FOSB_5end | ||
|id=chr19:45971060..45971122,+ | |id=chr19:45971060..45971122,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.12e-34!42;CL:0000860!4.19e-31!45;CL:0000738!4.35e-30!140;CL:0000766!4.28e-29!76;CL:0000557!1.70e-25!71;CL:0002031!6.39e-22!124;CL:0000839!9.51e-22!70;CL:0002009!1.08e-21!65;CL:0000037!1.18e-21!172;CL:0000566!1.18e-21!172;CL:0002087!1.36e-20!119;CL:0002194!5.07e-20!63;CL:0000576!5.07e-20!63;CL:0000040!5.07e-20!63;CL:0000559!5.07e-20!63;CL:0000988!4.38e-19!182;CL:0002032!4.83e-18!165;CL:0000837!4.83e-18!165;CL:0000763!5.97e-17!112;CL:0000049!5.97e-17!112;CL:0000134!1.21e-11!358;CL:0002320!3.13e-11!365;CL:0000219!2.78e-09!390;CL:0000094!2.08e-08!8;CL:0000034!1.53e-07!444;CL:0002393!3.75e-07!9;CL:0002397!3.75e-07!9;CL:0000048!3.98e-07!430 | |ontology_enrichment_celltype=CL:0002057!2.12e-34!42;CL:0000860!4.19e-31!45;CL:0000738!4.35e-30!140;CL:0000766!4.28e-29!76;CL:0000557!1.70e-25!71;CL:0002031!6.39e-22!124;CL:0000839!9.51e-22!70;CL:0002009!1.08e-21!65;CL:0000037!1.18e-21!172;CL:0000566!1.18e-21!172;CL:0002087!1.36e-20!119;CL:0002194!5.07e-20!63;CL:0000576!5.07e-20!63;CL:0000040!5.07e-20!63;CL:0000559!5.07e-20!63;CL:0000988!4.38e-19!182;CL:0002032!4.83e-18!165;CL:0000837!4.83e-18!165;CL:0000763!5.97e-17!112;CL:0000049!5.97e-17!112;CL:0000134!1.21e-11!358;CL:0002320!3.13e-11!365;CL:0000219!2.78e-09!390;CL:0000094!2.08e-08!8;CL:0000034!1.53e-07!444;CL:0002393!3.75e-07!9;CL:0002397!3.75e-07!9;CL:0000048!3.98e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.71e-35;33!CL:0002057;9.71e-35;33!CL:0000473;9.29e-25;39!CL:0000234;9.29e-25;39!CL:0000766;7.83e-21;69!CL:0000576;1.92e-19;48!CL:0000094;4.54e-18;8!CL:0000081;8.20e-13;11!CL:0002087;3.48e-12;104!CL:0000767;2.43e-10;3!CL:0000738;3.75e-10;136!CL:0000763;1.42e-09;100!CL:0000623;2.50e-09;3!CL:0000226;2.76e-09;3!CL:0000842;2.76e-09;3!CL:0000988;1.34e-07;177!CL:0000771;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.63e-48,136;CL:0000766,1.03e-41,72;CL:0000037,3.69e-40,168;CL:0000860,4.15e-38,42;CL:0002057,4.15e-38,42;CL:0000988,1.99e-37,177;CL:0000557,4.47e-34,67;CL:0002032,1.34e-33,161;CL:0000837,1.34e-33,161;CL:0000473,1.96e-32,48;CL:0000234,1.96e-32,48;CL:0002031,2.73e-32,120;CL:0002087,3.23e-30,115;CL:0000763,8.09e-30,108;CL:0000049,8.09e-30,108;CL:0000839,7.99e-28,66;CL:0002009,1.04e-27,61;CL:0002194,1.64e-24,59;CL:0000576,1.64e-24,59;CL:0000040,1.64e-24,59;CL:0000559,1.64e-24,59;CL:0000094,4.44e-18,8;CL:0000134,9.70e-18,354;CL:0002320,4.12e-17,361;CL:0000034,3.42e-15,441;CL:0000219,6.66e-15,386;CL:0000048,1.21e-13,427;CL:0000723,3.02e-13,433;CL:0000081,8.07e-13,11;CL:0000767,2.44e-10,3;CL:0000623,2.40e-09,3;CL:0000825,2.40e-09,3;CL:0000226,2.47e-09,3;CL:0000842,2.47e-09,3;CL:0000771,1.99e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-26;42!CL:0000049;3.32e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.63e-25!80;UBERON:0001474!8.58e-24!86;UBERON:0002390!1.79e-20!102;UBERON:0003061!1.79e-20!102;UBERON:0004765!1.77e-18!101;UBERON:0001434!1.77e-18!101;UBERON:0002193!4.97e-17!112;UBERON:0002405!1.43e-15!115;UBERON:0002384!3.82e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.91e-31,76;UBERON:0001474,2.32e-30,82;UBERON:0002390,1.39e-27,98;UBERON:0003061,1.39e-27,98;UBERON:0004765,7.12e-27,90;UBERON:0002193,3.69e-24,108;UBERON:0002405,5.63e-24,93;UBERON:0001434,2.66e-23,100;UBERON:0002384,2.95e-16,371;UBERON:0002204,1.58e-10,167;UBERON:0003081,4.18e-10,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1753137183299,11.5148819429164,15.6364284549237,0,0,0,0.0774672005803016,0,4.11040615068786,8.30993112797816,6.61796676651468,9.54847831149748,0,0,0,0.145398238779565,1.13362783106643,0.485168122375632,3.25400651667958,0.822335776043652,5.57471467611186,0,0.768482119587302,2.36482229888585,5.17118521104928,13.5551783552603,14.8969135253776,2.25890807451126,1.36453075028923,1.57306439111559,6.12167784741805,3.20929027076094,8.31138263538754,0,0.199463657621632,1.70489900213078,1.16083695451434,0.56738522469114,2.4912889959823,2.00998932205395,1.0429658368404,3.25783267057675,1.21079900526674,0.368277635987565,2.21523671208619,0.422510572623884,0.850417199860174,0.209658645508376,0.561643155732475,2.85336096398862,1.12507910687956,0.285012743741249,0.19891667719909,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,9.10740750575117,1.17447437874188,4.58727873750275,14.5388461436928,7.8471198817415,1.84368859342554,3.93419540227666,3.93010762749165,2.2616164889946,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,2.82249440514625,3.20928234940209,3.47578569318718,0,0.670700859703636,0,0,0,0,0,0,0,0,0.175669571386252,0.392937226493138,0,0,0,0,0,0.715471872916026,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,19.3890132074163,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.600182192168805,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,56.1859193115492,13.2590357143605,74.8617630218433,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,3.66566877261179,5.77543663258868,0,1.30139853857622,0,0.167516265334349,0,2.24702107184155,0,2.90090859405225,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,2.80428461064202,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0,4.46601623624687,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0.313932918407225,0,0.569219092059585,0,0.347119476670262,0.881931576729399,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.977756913674015,0.64127056201227,0.213452994739353,0,0,0,0.171594997861965,0,0.372757606696298,0,0,0,0,0.866851769704557,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,1.12527203925513,0.550157746388935,0,2.4747128070665,1.5476039091159,0,0.335434687599266,0,0.0524545881349981,1.05600336519407,0.35857467866569,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.471612915298998,0.414239055347196,0,0,0,0,8.70428485391158,0.2506898940227,1.83807346058077,2.62298104567844,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0.457680136793847,0,0.932623203496683,0,0.159296767163702,0,0,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,2.46873160583479,0,0.0642292250964595,0,0,0,0,0,0,0,0.588886311006154,0.707818340086442,0.183428598521679,0,0.381382095467167,0,0,0,0,0,0,0,3.54854606920909,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.443511850813194,0.115233987555779,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0.93061915699296,0,0.447421727191169,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.380095503034311,0,0,0,0.250707539292375,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,1.21270313374932,0,0,0,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.1753137183299,11.5148819429164,15.6364284549237,0,0,0,0.0774672005803016,0,4.11040615068786,8.30993112797816,6.61796676651468,9.54847831149748,0,0,0,0.145398238779565,1.13362783106643,0.485168122375632,3.25400651667958,0.822335776043652,5.57471467611186,0,0.768482119587302,2.36482229888585,5.17118521104928,13.5551783552603,14.8969135253776,2.25890807451126,1.36453075028923,1.57306439111559,6.12167784741805,3.20929027076094,8.31138263538754,0,0.199463657621632,1.70489900213078,1.16083695451434,0.56738522469114,2.4912889959823,2.00998932205395,1.0429658368404,3.25783267057675,1.21079900526674,0.368277635987565,2.21523671208619,0.422510572623884,0.850417199860174,0.209658645508376,0.561643155732475,2.85336096398862,1.12507910687956,0.285012743741249,0.19891667719909,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,9.10740750575117,1.17447437874188,4.58727873750275,14.5388461436928,7.8471198817415,1.84368859342554,3.93419540227666,3.93010762749165,2.2616164889946,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,2.82249440514625,3.20928234940209,3.47578569318718,0,0.670700859703636,0,0,0,0,0,0,0,0,0.175669571386252,0.392937226493138,0,0,0,0,0,0.715471872916026,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,19.3890132074163,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.600182192168805,0,0,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,56.1859193115492,13.2590357143605,74.8617630218433,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36436912242313,3.66566877261179,5.77543663258868,0,1.30139853857622,0,0.167516265334349,0,2.24702107184155,0,2.90090859405225,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3082884179662,2.80428461064202,4.48255742774466,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0.593929361665277,1.22864280839693,0,0,0,0,0,0,0,0,0.409074730008619,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.455768223388005,0,0.0897576444097721,0,4.46601623624687,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0.282706142867882,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0.300646838828985,0,0,0,0.313932918407225,0,0.569219092059585,0,0.347119476670262,0.881931576729399,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.977756913674015,0.64127056201227,0.213452994739353,0,0,0,0.171594997861965,0,0.372757606696298,0,0,0,0,0.866851769704557,0,0,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,1.12527203925513,0.550157746388935,0,2.4747128070665,1.5476039091159,0,0.335434687599266,0,0.0524545881349981,1.05600336519407,0.35857467866569,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0.471612915298998,0.414239055347196,0,0,0,0,8.70428485391158,0.2506898940227,1.83807346058077,2.62298104567844,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0.457680136793847,0,0.932623203496683,0,0.159296767163702,0,0,0.829412415681711,0,0,0.150257608997218,0,0,0.181848659202559,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,2.46873160583479,0,0.0642292250964595,0,0,0,0,0,0,0,0.588886311006154,0.707818340086442,0.183428598521679,0,0.381382095467167,0,0,0,0,0,0,0,3.54854606920909,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0.443511850813194,0.115233987555779,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0.93061915699296,0,0.447421727191169,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.641930933513346,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.380095503034311,0,0,0,0.250707539292375,0.303114792872958,0.267964130156178,0,0,0,0,0,0,0.112131862580613,0,1.21270313374932,0,0,0,0.0717222053926763,0,0.0814032686109745,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@FOSB | |short_description=p3@FOSB | ||
}} | }} |
Latest revision as of 17:29, 18 September 2015
Short description: | p3@FOSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOSB_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -130bp_to_ENST00000353609, ENST00000417353, ENST00000443841, ENST00000455928, NM_001114171, NM_006732, uc002pbw.2, uc002pbx.3, uc002pby.3, uc010eka.1, uc010ekb.1, uc010ekc.1, uc010ekd.1, uc010eke.2, uc010ekf.2, uc010ekg.2_5end |
EntrezGene: | FOSB |
HGNC: | 3797 |
UniProt: | P53539E9PHJ3E7EPR6E7EXA9A8VJE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.91e-31 | 76 |
bone element | 2.32e-30 | 82 |
hematopoietic system | 1.39e-27 | 98 |
blood island | 1.39e-27 | 98 |
skeletal element | 7.12e-27 | 90 |
hemolymphoid system | 3.69e-24 | 108 |
immune system | 5.63e-24 | 93 |
skeletal system | 2.66e-23 | 100 |
connective tissue | 2.95e-16 | 371 |
musculoskeletal system | 1.58e-10 | 167 |
lateral plate mesoderm | 4.18e-10 | 203 |