FFCP PHASE1:Hg19::chr2:87754989..87755007,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28717 | |HGNC=28717 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000409898,ENST00000419680_5end | |association_with_transcript=0bp_to_ENST00000409898,ENST00000419680_5end | ||
|cluster_id=chr2:87754989..87755007,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_LINC00152_5end | |description=CAGE_peak_1_at_LINC00152_5end | ||
|id=chr2:87754989..87755007,+ | |id=chr2:87754989..87755007,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.80e-29!42;CL:0000860!6.97e-28!45;CL:0000839!2.79e-21!70;CL:0000766!1.43e-20!76;CL:0000557!2.18e-20!71;CL:0000763!5.18e-20!112;CL:0000049!5.18e-20!112;CL:0002009!1.18e-19!65;CL:0002194!1.15e-18!63;CL:0000576!1.15e-18!63;CL:0000040!1.15e-18!63;CL:0000559!1.15e-18!63;CL:0000037!5.36e-13!172;CL:0000566!5.36e-13!172;CL:0000738!8.79e-13!140;CL:0002032!1.23e-12!165;CL:0000837!1.23e-12!165;CL:0002031!4.24e-12!124;CL:0000988!4.01e-11!182;CL:0000034!2.16e-09!444;CL:0000048!4.10e-09!430;CL:0002087!6.35e-09!119;CL:0000723!1.23e-08!436;CL:0000003!4.23e-08!722;CL:0000134!6.21e-07!358 | |ontology_enrichment_celltype=CL:0002057!2.80e-29!42;CL:0000860!6.97e-28!45;CL:0000839!2.79e-21!70;CL:0000766!1.43e-20!76;CL:0000557!2.18e-20!71;CL:0000763!5.18e-20!112;CL:0000049!5.18e-20!112;CL:0002009!1.18e-19!65;CL:0002194!1.15e-18!63;CL:0000576!1.15e-18!63;CL:0000040!1.15e-18!63;CL:0000559!1.15e-18!63;CL:0000037!5.36e-13!172;CL:0000566!5.36e-13!172;CL:0000738!8.79e-13!140;CL:0002032!1.23e-12!165;CL:0000837!1.23e-12!165;CL:0002031!4.24e-12!124;CL:0000988!4.01e-11!182;CL:0000034!2.16e-09!444;CL:0000048!4.10e-09!430;CL:0002087!6.35e-09!119;CL:0000723!1.23e-08!436;CL:0000003!4.23e-08!722;CL:0000134!6.21e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-38;33!CL:0002057;1.25e-38;33!CL:0000473;3.84e-30;39!CL:0000234;3.84e-30;39!CL:0000576;2.47e-22;48!CL:0000766;1.17e-16;69!CL:0000763;9.69e-10;100!CL:0000197;1.53e-07;6!CL:0000098;1.53e-07;6!CL:0002167;1.53e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-42,42;CL:0002057,1.47e-42,42;CL:0000473,4.93e-41,48;CL:0000234,4.93e-41,48;CL:0000839,6.67e-34,66;CL:0000766,2.49e-33,72;CL:0000557,1.10e-32,67;CL:0002009,3.56e-31,61;CL:0000763,6.61e-30,108;CL:0000049,6.61e-30,108;CL:0002194,1.21e-29,59;CL:0000576,1.21e-29,59;CL:0000040,1.21e-29,59;CL:0000559,1.21e-29,59;CL:0000738,2.56e-22,136;CL:0000037,4.31e-21,168;CL:0002031,6.16e-21,120;CL:0002032,1.07e-20,161;CL:0000837,1.07e-20,161;CL:0000988,7.03e-19,177;CL:0002087,2.39e-15,115;CL:0000034,7.84e-09,441;CL:0000048,1.89e-08,427;CL:0000134,3.03e-08,354;CL:0000723,5.81e-08,433;CL:0002320,1.21e-07,361;CL:0000197,1.58e-07,6;CL:0000098,1.58e-07,6;CL:0002167,1.58e-07,6;CL:0000219,7.25e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.31e-31;42!CL:0000049;5.30e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-17!80;UBERON:0001474!3.09e-16!86;UBERON:0004765!3.06e-14!101;UBERON:0001434!3.06e-14!101;UBERON:0002405!3.87e-12!115;UBERON:0002193!8.46e-12!112;UBERON:0002390!1.33e-11!102;UBERON:0003061!1.33e-11!102;UBERON:0002204!4.73e-11!167;UBERON:0001737!3.92e-07!9 | |ontology_enrichment_uberon=UBERON:0002371!1.15e-17!80;UBERON:0001474!3.09e-16!86;UBERON:0004765!3.06e-14!101;UBERON:0001434!3.06e-14!101;UBERON:0002405!3.87e-12!115;UBERON:0002193!8.46e-12!112;UBERON:0002390!1.33e-11!102;UBERON:0003061!1.33e-11!102;UBERON:0002204!4.73e-11!167;UBERON:0001737!3.92e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.86e-10;9!UBERON:0001557;5.86e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.24e-29,76;UBERON:0001474,3.21e-26,82;UBERON:0004765,4.70e-26,90;UBERON:0002405,8.28e-25,93;UBERON:0001434,1.05e-21,100;UBERON:0002390,3.24e-20,98;UBERON:0003061,3.24e-20,98;UBERON:0002193,5.66e-19,108;UBERON:0002204,4.45e-13,167;UBERON:0001737,6.08e-10,9;UBERON:0003081,2.68e-07,203;UBERON:0002384,7.66e-07,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,81.3513427206648,59.6667582743737,72.3006989483499,29.2759679274304,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0,0,0,11.8009283054671,3.0706351847777,6.81190942590734,0,0,0,0,0,3.52320527201817,0,0,0.217010870715852,0,0,0,26.7532759354399,52.1468802290557,44.6354672585582,25.5671940596253,48.9289786745973,69.0645207096081,77.9646383193028,99.390354133291,108.545343518861,38.2667705617647,63.9029836747988,65.004713565284,25.4127158382516,70.4097867149242,64.4956400357393,55.7072684115043,68.0369537401318,73.5237694668897,55.4150184313683,72.4053077166524,73.7368818421561,55.7201738166881,95.8881029728026,85.3266481123938,88.9420275008871,120.462554155067,109.028800041969,28.4537766237683,83.9673010051647,81.3308335723073,7.6051903072299,11.2680278981473,9.43463904787692,7.18903239337569,12.0141514273205,7.55410257476277,4.56020389985998,7.55883373356542,9.49853599576097,0,0,0,0,0,0.574752439954483,0,0,0,0,0,13.2171328579026,9.52864557068611,12.3790519844286,0,0,0,21.0654984192254,0.651844533267181,0.473447805734733,0,30.7492861003079,51.2614279006217,45.4144483896423,30.6008366054468,19.8541545574796,22.2401484327392,13.4839081775014,14.9229009604358,11.302320343667,0,0,0,28.1007169889964,6.51474839123266,8.24705869158312,11.3858861408776,3.82278497188916,2.60433381542567,7.60361635558699,3.312652619711,3.32765189001488,2.49861453104692,2.13099526839615,4.92676798152628,0,0,0,0,0,36.6965552490932,0.361439152384566,0,0,0,0,0.189069634328136,0.221729397462564,0,0,0.364295288292542,0,0,0,0,0.238490624305342,2.85997455390064,2.97166001063652,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,3.9534125230819,3.87780264148325,0,0.496971951695318,0,18.9345128562903,0,0,0,0,0,0,0,0.163461903113459,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0.718618141816238,0.336672227908132,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0.423863802319124,0,0.103052529238439,0.515281080091258,0,21.7721468591233,0,0,0,25.7017230341911,0,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0,0,0.10366105501537,1.00928340350251,2.55484151353081,0,0,0,0,0,14.1968160047813,15.0040374169511,12.0505514941741,15.5514501552675,18.3018733037621,15.4225902422213,16.1797569792197,17.8561533264065,17.698369219534,0,0,0.4115740113314,0,0,0,0,0,0,24.1910612520921,0,0,0.201057944823262,0,0,0,0,25.8524803094421,13.854225919827,0,37.0388410061289,33.1042224888201,0,0,0,0,0,8.43604505880993,19.14996261467,17.1547867663288,0,0,0,0,10.5658120815871,5.39053100406007,4.90007841617669,6.43836410474538,2.79390734885544,0.763976851116555,0,0,0,16.8192112392594,9.1464458441785,0.112131084345361,0,0,0.129271715757778,0,29.58559633946,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,10.4584015032035,0.099972991182057,6.08118903205952,4.01805673145701,10.5416969741516,0,0,25.6746429073293,0.144781306667579,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,3.82763250991898,0,0,0,0.12269149171914,0,0,35.9789590448296,31.5819310170976,23.1822550099884,29.0510709181929,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,14.732349435654,0,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0,1.46139224653261,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,23.6800666777609,27.9735932596644,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0.413509717453592,0.322260734604821,0,0,0,0,0,23.0979009615197,0,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.731140468893853,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,22.9563163216321,0.405820753925408,0.30982349809975,0.281695602532241,16.3488941512619,20.8287966947817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,6.8941933247652,0.211673582723883,5.843194924942,0,0,0,12.5317238545034,8.29529711227856,0,0,0,0.343505344755765,0,0,0,0,0,0,21.3659985996027,0,1.4098700508785,0,0,0,0,0.568272293612826,32.2305054395881,9.79983446747707,0,6.95903353436409,0,0,0,0,0,0,0,0.306806047506464,0,0,0.179736702294654,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,0,0,0,3.54296554325536,0,0,0,0,0,0,0,0,0,0,0,0,13.7170498684725,15.8463836585222,0,0,0,0.332423363800313,0,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0.277349346026277,0,0,0.261177619741208,0,0,0,0.0730893170861856,0.0821154570532092,0,0.0882561266915003,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.209205692624666,0.101998217636322,0,2.40168115483916,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.13480708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| ||
|short_description=p1@LINC00152 | |short_description=p1@LINC00152 | ||
}} | }} |
Latest revision as of 20:13, 18 September 2015
Short description: | p1@LINC00152 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINC00152_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | 0bp_to_ENST00000409898, ENST00000419680_5end |
EntrezGene: | NA |
HGNC: | 28717 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.24e-29 | 76 |
bone element | 3.21e-26 | 82 |
skeletal element | 4.70e-26 | 90 |
immune system | 8.28e-25 | 93 |
skeletal system | 1.05e-21 | 100 |
hematopoietic system | 3.24e-20 | 98 |
blood island | 3.24e-20 | 98 |
hemolymphoid system | 5.66e-19 | 108 |
musculoskeletal system | 4.45e-13 | 167 |
larynx | 6.08e-10 | 9 |
lateral plate mesoderm | 2.68e-07 | 203 |
connective tissue | 7.66e-07 | 371 |