FFCP PHASE1:Hg19::chr15:71055744..71055758,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:71055744..71055758,- to FFCP PHASE1:Hg19::chr15:71055744..71055758,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55075 | |EntrezGene=55075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15947 | |HGNC=15947 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2B9 | |UniProt=F5H2B9 | ||
|association_with_transcript=10bp_to_ENST00000539319_5end | |||
|cluster_id=chr15:71055744..71055758,- | |||
|description=CAGE_peak_5_at_UACA_5end | |||
|id=chr15:71055744..71055758,- | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-20!180;CL:0000057!5.62e-17!75;CL:0002334!2.94e-09!12;CL:0000680!1.08e-07!57;CL:0000056!1.08e-07!57;CL:0000355!1.08e-07!57;CL:0000183!4.14e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.59e-16;12!CL:0000359;1.64e-08;32!CL:0000057;9.36e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.82e-16,76;CL:0002334,4.73e-16,12;CL:0000048,1.95e-09,427;CL:0000680,5.73e-09,58;CL:0000056,5.73e-09,58;CL:0000355,5.73e-09,58;CL:0000723,6.10e-09,433;CL:0000359,2.26e-08,32;CL:0000034,2.62e-08,441;CL:0000192,7.52e-08,43;CL:0000514,7.52e-08,43;CL:0000187,4.45e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.00e-09!216;UBERON:0000914!3.88e-09!83;UBERON:0002329!3.88e-09!83;UBERON:0003077!3.88e-09!83;UBERON:0003059!3.88e-09!83;UBERON:0007282!3.88e-09!83;UBERON:0009618!3.88e-09!83;UBERON:0007285!3.88e-09!83;UBERON:0000475!2.06e-08!365;UBERON:0001134!3.01e-08!61;UBERON:0002036!3.01e-08!61;UBERON:0003082!3.01e-08!61;UBERON:0002385!3.85e-08!63;UBERON:0001015!3.85e-08!63;UBERON:0000383!3.85e-08!63;UBERON:0002049!8.33e-08!79;UBERON:0007798!8.33e-08!79;UBERON:0000468!4.60e-07!659;UBERON:0000490!5.17e-07!138;UBERON:0004290!9.94e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;4.46e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,1.07e-09,64;UBERON:0001015,1.07e-09,64;UBERON:0000383,1.07e-09,64;UBERON:0001134,1.60e-09,62;UBERON:0002036,1.60e-09,62;UBERON:0003082,1.60e-09,62;UBERON:0007524,5.55e-09,73;UBERON:0002329,9.77e-09,71;UBERON:0003059,9.77e-09,71;UBERON:0007282,9.77e-09,71;UBERON:0004290,9.77e-09,71;UBERON:0009618,9.77e-09,71;UBERON:0003077,1.67e-08,72;UBERON:0007285,1.67e-08,72;UBERON:0005284,4.63e-08,5;UBERON:0007503,3.00e-07,78;UBERON:0000486,5.74e-07,83 | |||
|phase1_expression=2.54349730978779,1.49870366723688,2.39622486963151,0,1.78784437770915,6.10636966870258,0,1.89515962028049,0,0,0,0.218441372130172,0,0.495065411840187,1.98838425436749,0,1.20538905604795,0,0,0.123121058076788,0.816002764977012,0,1.14494394852423,0.410623275218653,5.14724822338691,0,0,0,0,0,0,0,0,0,0.232401601740905,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0,0.361439152384566,1.50401373190767,0.289693037921647,0,0.486634870302636,0.189069634328136,0.221729397462564,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0,1.77883131343355,1.67360306382335,0.805658634218294,3.80136052859256,0.732186172644509,1.10298924103761,0,0.267899184852239,0.22452937262617,0.450445921933289,0,0.949265659568129,0.366403487860815,0,0,0,28.8243731983285,4.55869841992487,2.64818361626438,2.58152958673932,1.06400514659507,0.560677600142307,0,1.48000529050296,2.17847724779836,0,0.980771418680752,3.02714855289863,15.55674996096,0.234321431833797,1.24864030732128,0,1.64393548606981,0.117434498643765,0,0,3.47062091133319,0.61417158655884,0.929932030581889,0,0.741800787835671,0.910161361938026,0.718618141816238,0.336672227908132,1.00094815897571,7.20366700258876,1.75591048352335,0.612975591598039,0.45071417671979,0.907457465280168,2.69084453533293,0.85422955527427,0.847727604638247,5.10154863343484,1.54578793857658,1.54584324027377,0.930584281657949,1.85653965465393,0.487185025805993,2.77677151668526,0.368199594569197,0,1.77504796258307,1.41052937518696,1.3564847384839,0.57978255948989,0,1.72082757233402,0.121973706129595,0.132529768321485,0.232387885739037,0,0.504641701751257,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.245976877086227,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0,5.63561732331944,0.577465791044295,0,0.380508304469197,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.895585227028483,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0,0,2.13049060256185,0.87192013766656,10.267360014933,52.7428600291733,0,0,7.44626726437637,9.36066932202295,0.514414748524284,0,0.532844358032199,0,0,0.823240336780769,2.60588947434988,0.355391948742546,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,36.9022277457037,0,1.42636905040718,7.96297186671686,5.75333703141074,1.43248770591916,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0.500170521059677,1.89885516589815,2.70362119990049,4.10386674233472,0.157702415033935,4.33423235473039,3.61135319673263,0,1.03473071292505,1.32845119707087,0.737476674166813,3.99664626553181,1.76221041716467,3.43143423810856,0,0,0,0,0,0,6.4508030032882,7.82656063769118,2.80660094433074,6.02254001501795,4.09365799253363,20.7501558275254,1.48418066444991,3.08419387605311,6.21466038595945,3.44934055257998,3.11552657510173,3.1376802184189,0.241718899183244,0,0.0920809889358963,5.0518357192427,10.1971054083762,2.75361271414791,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.863663664408557,0,0.541892875087706,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0.165018999841176,0,0,0,0.386682873168488,0.462145851343933,1.22802939780904,0.413509717453592,0.537101224341368,0.145016693914229,0.681813019328807,0.623224249527161,0.495854746082934,0,0.382838137483752,0.10115778085555,1.85938219718914,10.3888074454111,0,0.308033580176089,1.59691809095107,0,0,1.86062352764589,5.95453390975468,6.96034734381197,4.38449446024797,0,0,0,1.56989728039846,0.179872457583315,0.823611089208164,0.824686816419805,2.22400729730648,6.34041284692033,0.421258456238981,0,0.487426979262569,1.05650146756755,14.1959907864305,2.40389234321312,1.13008116620243,0,1.32687795048244,7.45366504931397,0,0,0.405820753925408,0,1.97186921772569,1.14729081763241,0.392996164052485,1.07001315444375,4.25713276884717,0,0,0,0.699869440489966,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.586032717087576,1.45632626099416,0,3.12549761487054,0.71623345421307,0,0,0,0,0.667852230137435,0,0.422250816255987,0.796991953004279,0,0,1.02268682502155,0,1.24415835064723,1.3480252672099,0,0,0,0,2.22273980289274,0,0.463840490809256,0,0.260427761085233,0.0874599999961957,0,0.682760689712998,0.508507300585533,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0.227884111694002,0,0,0,0.638002319463839,1.83195186803725,0.533034776018635,0,0,0,0,0,0,0,0,1.26598838716816,3.26465616318295,0.848118428603645,0,0,0.530745387020035,1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| 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| ||
|short_description=p5@UACA | |||
}} | }} |
Latest revision as of 20:51, 18 September 2015
Short description: | p5@UACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UACA_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENST00000539319_5end |
EntrezGene: | UACA |
HGNC: | 15947 |
UniProt: | F5H2B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.82e-16 | 76 |
preadipocyte | 4.73e-16 | 12 |
multi fate stem cell | 1.95e-09 | 427 |
muscle precursor cell | 5.73e-09 | 58 |
myoblast | 5.73e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.73e-09 | 58 |
somatic stem cell | 6.10e-09 | 433 |
vascular associated smooth muscle cell | 2.26e-08 | 32 |
stem cell | 2.62e-08 | 441 |
smooth muscle cell | 7.52e-08 | 43 |
smooth muscle myoblast | 7.52e-08 | 43 |
muscle cell | 4.45e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 1.07e-09 | 64 |
musculature | 1.07e-09 | 64 |
musculature of body | 1.07e-09 | 64 |
skeletal muscle tissue | 1.60e-09 | 62 |
striated muscle tissue | 1.60e-09 | 62 |
myotome | 1.60e-09 | 62 |
dense mesenchyme tissue | 5.55e-09 | 73 |
somite | 9.77e-09 | 71 |
presomitic mesoderm | 9.77e-09 | 71 |
presumptive segmental plate | 9.77e-09 | 71 |
dermomyotome | 9.77e-09 | 71 |
trunk paraxial mesoderm | 9.77e-09 | 71 |
paraxial mesoderm | 1.67e-08 | 72 |
presumptive paraxial mesoderm | 1.67e-08 | 72 |
brain vasculature | 4.63e-08 | 5 |
epithelial vesicle | 3.00e-07 | 78 |
multilaminar epithelium | 5.74e-07 | 83 |