FFCP PHASE1:Hg19::chr2:182756915..182756931,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6744 | |EntrezGene=6744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11319 | |HGNC=11319 | ||
|TSSclassifier=strong | |||
|UniProt=E7END2,F2Z295 | |UniProt=E7END2,F2Z295 | ||
|association_with_transcript=0bp_to_ENST00000428267,ENST00000440623,ENST00000454579_5end | |association_with_transcript=0bp_to_ENST00000428267,ENST00000440623,ENST00000454579_5end | ||
|cluster_id=chr2:182756915..182756931,+ | |||
|description=CAGE_peak_4_at_SSFA2_5end | |description=CAGE_peak_4_at_SSFA2_5end | ||
|id=chr2:182756915..182756931,+ | |id=chr2:182756915..182756931,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.50e-18!45;CL:0002057!6.12e-17!42;CL:0000557!1.91e-16!71;CL:0000766!7.14e-16!76;CL:0002009!7.68e-15!65;CL:0002194!9.03e-14!63;CL:0000576!9.03e-14!63;CL:0000040!9.03e-14!63;CL:0000559!9.03e-14!63;CL:0000839!1.03e-13!70;CL:0000763!2.25e-08!112;CL:0000049!2.25e-08!112 | |ontology_enrichment_celltype=CL:0000860!1.50e-18!45;CL:0002057!6.12e-17!42;CL:0000557!1.91e-16!71;CL:0000766!7.14e-16!76;CL:0002009!7.68e-15!65;CL:0002194!9.03e-14!63;CL:0000576!9.03e-14!63;CL:0000040!9.03e-14!63;CL:0000559!9.03e-14!63;CL:0000839!1.03e-13!70;CL:0000763!2.25e-08!112;CL:0000049!2.25e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-15;33!CL:0002057;1.37e-15;33!CL:0000473;7.46e-11;39!CL:0000234;7.46e-11;39!CL:0000576;2.20e-09;48!CL:0000766;4.15e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;1.37e-15;33!CL:0002057;1.37e-15;33!CL:0000473;7.46e-11;39!CL:0000234;7.46e-11;39!CL:0000576;2.20e-09;48!CL:0000766;4.15e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.00e-17,42;CL:0002057,1.00e-17,42;CL:0000557,7.83e-15,67;CL:0000473,9.50e-15,48;CL:0000234,9.50e-15,48;CL:0000766,2.65e-14,72;CL:0002009,3.46e-13,61;CL:0002194,4.11e-12,59;CL:0000576,4.11e-12,59;CL:0000040,4.11e-12,59;CL:0000559,4.11e-12,59;CL:0000839,4.85e-12,66 | |||
|ontology_enrichment_development_v019=CL:0002057;6.70e-13;42 | |ontology_enrichment_development_v019=CL:0002057;6.70e-13;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000062!4.23e-19!511;UBERON:0000467!6.75e-18!625;UBERON:0000480!1.03e-17!626;UBERON:0000468!1.07e-15!659;UBERON:0002050!2.93e-13!605;UBERON:0005423!2.93e-13!605;UBERON:0000923!3.43e-13!604;UBERON:0005291!3.43e-13!604;UBERON:0006598!3.43e-13!604;UBERON:0002532!3.43e-13!604;UBERON:0000922!5.39e-12!612;UBERON:0002371!6.72e-12!80;UBERON:0004765!6.72e-11!101;UBERON:0001434!6.72e-11!101;UBERON:0001474!9.41e-11!86;UBERON:0004119!3.13e-08!169;UBERON:0000925!3.13e-08!169;UBERON:0006595!3.13e-08!169;UBERON:0000926!8.05e-08!448;UBERON:0004120!8.05e-08!448;UBERON:0006603!8.05e-08!448;UBERON:0001007!8.47e-08!155;UBERON:0001555!8.47e-08!155;UBERON:0007026!8.47e-08!155;UBERON:0003081!9.32e-08!216;UBERON:0000165!1.07e-07!28;UBERON:0000930!1.07e-07!28;UBERON:0002390!1.38e-07!102;UBERON:0003061!1.38e-07!102;UBERON:0000166!1.55e-07!21;UBERON:0002405!1.87e-07!115;UBERON:0000161!2.68e-07!35;UBERON:0002193!8.82e-07!112 | |ontology_enrichment_uberon=UBERON:0000062!4.23e-19!511;UBERON:0000467!6.75e-18!625;UBERON:0000480!1.03e-17!626;UBERON:0000468!1.07e-15!659;UBERON:0002050!2.93e-13!605;UBERON:0005423!2.93e-13!605;UBERON:0000923!3.43e-13!604;UBERON:0005291!3.43e-13!604;UBERON:0006598!3.43e-13!604;UBERON:0002532!3.43e-13!604;UBERON:0000922!5.39e-12!612;UBERON:0002371!6.72e-12!80;UBERON:0004765!6.72e-11!101;UBERON:0001434!6.72e-11!101;UBERON:0001474!9.41e-11!86;UBERON:0004119!3.13e-08!169;UBERON:0000925!3.13e-08!169;UBERON:0006595!3.13e-08!169;UBERON:0000926!8.05e-08!448;UBERON:0004120!8.05e-08!448;UBERON:0006603!8.05e-08!448;UBERON:0001007!8.47e-08!155;UBERON:0001555!8.47e-08!155;UBERON:0007026!8.47e-08!155;UBERON:0003081!9.32e-08!216;UBERON:0000165!1.07e-07!28;UBERON:0000930!1.07e-07!28;UBERON:0002390!1.38e-07!102;UBERON:0003061!1.38e-07!102;UBERON:0000166!1.55e-07!21;UBERON:0002405!1.87e-07!115;UBERON:0000161!2.68e-07!35;UBERON:0002193!8.82e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.54e-07;10!UBERON:0000158;1.54e-07;10!UBERON:0000165;2.18e-07;28!UBERON:0000161;2.66e-07;19!UBERON:0000166;2.66e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.54e-07;10!UBERON:0000158;1.54e-07;10!UBERON:0000165;2.18e-07;28!UBERON:0000161;2.66e-07;19!UBERON:0000166;2.66e-07;19 | ||
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| ||
|short_description=p4@SSFA2 | |short_description=p4@SSFA2 | ||
}} | }} |
Latest revision as of 21:39, 18 September 2015
Short description: | p4@SSFA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SSFA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428267, ENST00000440623, ENST00000454579_5end |
EntrezGene: | SSFA2 |
HGNC: | 11319 |
UniProt: | E7END2F2Z295 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.00e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.00e-17 | 42 |
granulocyte monocyte progenitor cell | 7.83e-15 | 67 |
defensive cell | 9.50e-15 | 48 |
phagocyte | 9.50e-15 | 48 |
myeloid leukocyte | 2.65e-14 | 72 |
macrophage dendritic cell progenitor | 3.46e-13 | 61 |
monopoietic cell | 4.11e-12 | 59 |
monocyte | 4.11e-12 | 59 |
monoblast | 4.11e-12 | 59 |
promonocyte | 4.11e-12 | 59 |
myeloid lineage restricted progenitor cell | 4.85e-12 | 66 |
Ontology term | p-value | n |
---|---|---|
embryonic structure | 5.30e-14 | 564 |
germ layer | 7.97e-13 | 560 |
germ layer / neural crest | 7.97e-13 | 560 |
embryonic tissue | 7.97e-13 | 560 |
presumptive structure | 7.97e-13 | 560 |
germ layer / neural crest derived structure | 7.97e-13 | 560 |
epiblast (generic) | 7.97e-13 | 560 |
developing anatomical structure | 4.98e-12 | 581 |
embryo | 8.53e-12 | 592 |
bone marrow | 1.03e-10 | 76 |
bone element | 2.93e-09 | 82 |
skeletal element | 1.17e-08 | 90 |
lateral plate mesoderm | 1.99e-08 | 203 |
skeletal system | 5.28e-08 | 100 |
oral opening | 8.65e-08 | 22 |
mouth | 9.35e-08 | 29 |
stomodeum | 9.35e-08 | 29 |
orifice | 1.44e-07 | 36 |
immune system | 2.21e-07 | 93 |