FFCP PHASE1:Hg19::chr11:62649266..62649289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6520 | |EntrezGene=6520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11026 | |HGNC=11026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000457660_5end | |association_with_transcript=0bp_to_ENST00000457660_5end | ||
|cluster_id=chr11:62649266..62649289,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_6_at_SLC3A2_5end | |description=CAGE_peak_6_at_SLC3A2_5end | ||
|id=chr11:62649266..62649289,+ | |id=chr11:62649266..62649289,+ | ||
|ontology_enrichment_celltype=CL:0000860;1.65e-21;33!CL:0002057;1.65e-21;33!CL:0000473;4.85e-17;39!CL:0000234;4.85e-17;39!CL:0000576;4.95e-12;48!CL:0000766;7.55e-09;69 | |ontology_enrichment_celltype=CL:0000012!2.98e-23!682;CL:0000548!3.78e-22!679;CL:0000004!3.78e-22!679;CL:0000255!3.78e-22!679;CL:0002057!1.59e-17!42;CL:0000144!2.40e-17!625;CL:0000860!1.41e-16!45;CL:0000557!6.21e-16!71;CL:0000063!7.81e-16!578;CL:0000839!1.03e-15!70;CL:0000003!3.09e-15!722;CL:0002009!6.50e-15!65;CL:0002371!1.94e-14!591;CL:0002194!2.98e-14!63;CL:0000576!2.98e-14!63;CL:0000040!2.98e-14!63;CL:0000559!2.98e-14!63;CL:0000766!2.99e-13!76;CL:0000763!4.87e-13!112;CL:0000049!4.87e-13!112;CL:0002320!1.34e-11!365;CL:0000134!2.08e-11!358;CL:0000034!4.90e-10!444;CL:0000048!6.41e-10!430;CL:0000219!8.15e-10!390;CL:0000723!9.00e-10!436 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;1.65e-21;33!CL:0002057;1.65e-21;33!CL:0000473;4.85e-17;39!CL:0000234;4.85e-17;39!CL:0000576;4.95e-12;48!CL:0000766;7.55e-09;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.22e-20,42;CL:0002057,3.22e-20,42;CL:0000473,7.83e-20,48;CL:0000234,7.83e-20,48;CL:0000557,5.19e-18,67;CL:0000839,9.25e-18,66;CL:0002009,7.52e-17,61;CL:0002194,4.41e-16,59;CL:0000576,4.41e-16,59;CL:0000040,4.41e-16,59;CL:0000559,4.41e-16,59;CL:0000766,1.21e-15,72;CL:0000763,3.13e-14,108;CL:0000049,3.13e-14,108;CL:0002320,9.28e-13,361;CL:0000134,1.06e-12,354;CL:0000219,6.62e-11,386;CL:0000048,2.09e-09,427;CL:0000034,2.84e-09,441;CL:0000723,3.24e-09,433;CL:0002031,2.36e-08,120;CL:0000988,5.59e-08,177;CL:0002032,1.59e-07,161;CL:0000837,1.59e-07,161;CL:0000037,4.74e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.70e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.35e-14!80;UBERON:0001474!1.62e-13!86;UBERON:0004765!5.39e-12!101;UBERON:0001434!5.39e-12!101;UBERON:0002384!2.84e-11!375;UBERON:0002390!2.36e-08!102;UBERON:0003061!2.36e-08!102;UBERON:0002204!1.60e-07!167;UBERON:0002193!6.49e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.95e-16,76;UBERON:0001474,2.45e-15,82;UBERON:0004765,1.46e-12,90;UBERON:0001434,2.05e-12,100;UBERON:0002384,3.39e-12,371;UBERON:0002405,5.43e-11,93;UBERON:0002390,3.05e-10,98;UBERON:0003061,3.05e-10,98;UBERON:0002193,2.59e-08,108 | |||
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| ||
|short_description=p6@SLC3A2 | |short_description=p6@SLC3A2 | ||
}} | }} |
Latest revision as of 22:07, 18 September 2015
Short description: | p6@SLC3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC3A2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000457660_5end |
EntrezGene: | SLC3A2 |
HGNC: | 11026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.22e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.22e-20 | 42 |
defensive cell | 7.83e-20 | 48 |
phagocyte | 7.83e-20 | 48 |
granulocyte monocyte progenitor cell | 5.19e-18 | 67 |
myeloid lineage restricted progenitor cell | 9.25e-18 | 66 |
macrophage dendritic cell progenitor | 7.52e-17 | 61 |
monopoietic cell | 4.41e-16 | 59 |
monocyte | 4.41e-16 | 59 |
monoblast | 4.41e-16 | 59 |
promonocyte | 4.41e-16 | 59 |
myeloid leukocyte | 1.21e-15 | 72 |
myeloid cell | 3.13e-14 | 108 |
common myeloid progenitor | 3.13e-14 | 108 |
connective tissue cell | 9.28e-13 | 361 |
mesenchymal cell | 1.06e-12 | 354 |
motile cell | 6.62e-11 | 386 |
multi fate stem cell | 2.09e-09 | 427 |
stem cell | 2.84e-09 | 441 |
somatic stem cell | 3.24e-09 | 433 |
hematopoietic lineage restricted progenitor cell | 2.36e-08 | 120 |
hematopoietic cell | 5.59e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.59e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-07 | 161 |
hematopoietic stem cell | 4.74e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.95e-16 | 76 |
bone element | 2.45e-15 | 82 |
skeletal element | 1.46e-12 | 90 |
skeletal system | 2.05e-12 | 100 |
connective tissue | 3.39e-12 | 371 |
immune system | 5.43e-11 | 93 |
hematopoietic system | 3.05e-10 | 98 |
blood island | 3.05e-10 | 98 |
hemolymphoid system | 2.59e-08 | 108 |