FFCP PHASE1:Hg19::chr3:52332904..52332924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=41043 | |HGNC=41043 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000472761_5end | |association_with_transcript=5bp_to_ENST00000472761_5end | ||
|cluster_id=chr3:52332904..52332924,- | |||
|description=CAGE_peak_1_at_GLYCTK-AS1_5end | |description=CAGE_peak_1_at_GLYCTK-AS1_5end | ||
|id=chr3:52332904..52332924,- | |id=chr3:52332904..52332924,- | ||
|ontology_enrichment_celltype=CL:0000128;8.36e-07;7!CL:0000126;8.36e-07;7!CL:0000127;8.36e-07;7 | |ontology_enrichment_celltype=CL:0002322!1.12e-14!5;CL:0002605!2.33e-09!3;CL:0000128!5.32e-07!7;CL:0000126!5.32e-07!7;CL:0000127!5.32e-07!7;CL:0002453!5.32e-07!7 | ||
| | |ontology_enrichment_celltype_v019=CL:0000128;8.36e-07;7!CL:0000126;8.36e-07;7!CL:0000127;8.36e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.38e-07,59;CL:0000128,8.61e-07,7;CL:0000126,8.61e-07,7;CL:0000127,8.61e-07,7;CL:0002453,8.61e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001905;4.69e-21;2!UBERON:0002757;4.69e-21;2!UBERON:0010134;4.69e-21;2!UBERON:0005408;4.69e-21;2!UBERON:0001899;4.69e-21;2!UBERON:0003296;5.17e-11;4!UBERON:0010133;5.17e-11;4!UBERON:0002784;5.17e-11;4!UBERON:0000922;2.97e-07;49 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.90e-18!94;UBERON:0001016!2.90e-18!94;UBERON:0005743!9.43e-18!86;UBERON:0001017!6.13e-16!82;UBERON:0001049!6.82e-16!57;UBERON:0005068!6.82e-16!57;UBERON:0006241!6.82e-16!57;UBERON:0007135!6.82e-16!57;UBERON:0003075!1.14e-13!86;UBERON:0007284!1.14e-13!86;UBERON:0002780!2.01e-13!41;UBERON:0001890!2.01e-13!41;UBERON:0006240!2.01e-13!41;UBERON:0003056!2.92e-13!61;UBERON:0000956!3.42e-13!25;UBERON:0000203!3.42e-13!25;UBERON:0003080!5.10e-13!42;UBERON:0002346!8.66e-13!90;UBERON:0002020!2.09e-12!34;UBERON:0003528!2.09e-12!34;UBERON:0002616!4.85e-12!59;UBERON:0001869!1.73e-11!32;UBERON:0002791!4.63e-11!33;UBERON:0000955!8.75e-11!69;UBERON:0006238!8.75e-11!69;UBERON:0001893!1.17e-10!34;UBERON:0007023!3.56e-10!115;UBERON:0004121!2.30e-09!169;UBERON:0000924!5.66e-09!173;UBERON:0006601!5.66e-09!173;UBERON:0000153!1.47e-08!129;UBERON:0007811!1.47e-08!129;UBERON:0002619!2.10e-08!22;UBERON:0000033!1.10e-07!123;UBERON:0001950!2.00e-07!20;UBERON:0001905!2.86e-07!2;UBERON:0002757!2.86e-07!2;UBERON:0010134!2.86e-07!2;UBERON:0002784!2.86e-07!2;UBERON:0005408!2.86e-07!2;UBERON:0001899!2.86e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.69e-21;2!UBERON:0002757;4.69e-21;2!UBERON:0010134;4.69e-21;2!UBERON:0005408;4.69e-21;2!UBERON:0001899;4.69e-21;2!UBERON:0003296;5.17e-11;4!UBERON:0010133;5.17e-11;4!UBERON:0002784;5.17e-11;4!UBERON:0000922;2.97e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.53e-21,2;UBERON:0002757,9.53e-21,2;UBERON:0010134,9.53e-21,2;UBERON:0005408,9.53e-21,2;UBERON:0001899,9.53e-21,2;UBERON:0003296,7.35e-11,4;UBERON:0010133,7.35e-11,4;UBERON:0002784,7.35e-11,4;UBERON:0001016,1.81e-09,89;UBERON:0003056,2.15e-09,61;UBERON:0001017,1.40e-08,81;UBERON:0002780,3.27e-08,41;UBERON:0001890,3.27e-08,41;UBERON:0003080,3.27e-08,41;UBERON:0006240,3.27e-08,41;UBERON:0003075,9.04e-07,82;UBERON:0007284,9.04e-07,82 | |||
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| ||
|short_description=p1@GLYCTK-AS1 | |short_description=p1@GLYCTK-AS1 | ||
}} | }} |
Latest revision as of 23:21, 18 September 2015
Short description: | p1@GLYCTK-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLYCTK-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000472761_5end |
EntrezGene: | NA |
HGNC: | 41043 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.38e-07 | 59 |
oligodendrocyte | 8.61e-07 | 7 |
macroglial cell | 8.61e-07 | 7 |
astrocyte | 8.61e-07 | 7 |
oligodendrocyte precursor cell | 8.61e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.53e-21 | 2 |
regional part of epithalamus | 9.53e-21 | 2 |
secretory circumventricular organ | 9.53e-21 | 2 |
circumventricular organ | 9.53e-21 | 2 |
epithalamus | 9.53e-21 | 2 |
gland of diencephalon | 7.35e-11 | 4 |
neuroendocrine gland | 7.35e-11 | 4 |
regional part of diencephalon | 7.35e-11 | 4 |
nervous system | 1.81e-09 | 89 |
pre-chordal neural plate | 2.15e-09 | 61 |
central nervous system | 1.40e-08 | 81 |
regional part of forebrain | 3.27e-08 | 41 |
forebrain | 3.27e-08 | 41 |
anterior neural tube | 3.27e-08 | 41 |
future forebrain | 3.27e-08 | 41 |
neural plate | 9.04e-07 | 82 |
presumptive neural plate | 9.04e-07 | 82 |