FFCP PHASE1:Hg19::chrX:109590174..109590203,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24826 | |HGNC=24826 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000372054_5end | |association_with_transcript=0bp_to_ENST00000372054_5end | ||
|cluster_id=chrX:109590174..109590203,- | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_1_at_GNG5P2_5end | |description=CAGE_peak_1_at_GNG5P2_5end | ||
|id=chrX:109590174..109590203,- | |id=chrX:109590174..109590203,- | ||
|ontology_enrichment_celltype=CL:0002057!4.65e-39!42;CL:0000860!2.40e-35!45;CL:0000839!9.02e-29!70;CL:0000557!9.16e-29!71;CL:0002009!1.04e-27!65;CL:0000766!8.28e-27!76;CL:0002194!8.56e-26!63;CL:0000576!8.56e-26!63;CL:0000040!8.56e-26!63;CL:0000559!8.56e-26!63;CL:0000763!2.50e-25!112;CL:0000049!2.50e-25!112;CL:0000738!2.93e-21!140;CL:0002031!2.42e-20!124;CL:0000037!8.47e-20!172;CL:0000566!8.47e-20!172;CL:0000988!2.99e-19!182;CL:0002032!3.09e-19!165;CL:0000837!3.09e-19!165;CL:0002087!3.17e-15!119;CL:0000034!2.51e-10!444;CL:0000048!4.22e-10!430;CL:0000723!7.81e-10!436;CL:0000134!5.97e-09!358;CL:0002320!1.32e-08!365;CL:0000219!1.03e-07!390;CL:0000453!5.15e-07!5;CL:0000003!5.56e-07!722 | |ontology_enrichment_celltype=CL:0002057!4.65e-39!42;CL:0000860!2.40e-35!45;CL:0000839!9.02e-29!70;CL:0000557!9.16e-29!71;CL:0002009!1.04e-27!65;CL:0000766!8.28e-27!76;CL:0002194!8.56e-26!63;CL:0000576!8.56e-26!63;CL:0000040!8.56e-26!63;CL:0000559!8.56e-26!63;CL:0000763!2.50e-25!112;CL:0000049!2.50e-25!112;CL:0000738!2.93e-21!140;CL:0002031!2.42e-20!124;CL:0000037!8.47e-20!172;CL:0000566!8.47e-20!172;CL:0000988!2.99e-19!182;CL:0002032!3.09e-19!165;CL:0000837!3.09e-19!165;CL:0002087!3.17e-15!119;CL:0000034!2.51e-10!444;CL:0000048!4.22e-10!430;CL:0000723!7.81e-10!436;CL:0000134!5.97e-09!358;CL:0002320!1.32e-08!365;CL:0000219!1.03e-07!390;CL:0000453!5.15e-07!5;CL:0000003!5.56e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.24e-55;33!CL:0002057;3.24e-55;33!CL:0000473;1.13e-44;39!CL:0000234;1.13e-44;39!CL:0000576;6.76e-35;48!CL:0000766;5.73e-22;69!CL:0000763;4.80e-11;100!CL:0000453;5.94e-11;5!CL:0002087;2.65e-08;104!CL:0000738;2.79e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.18e-65,48;CL:0000234,1.18e-65,48;CL:0000860,2.77e-65,42;CL:0002057,2.77e-65,42;CL:0002009,2.32e-53,61;CL:0002194,7.86e-50,59;CL:0000576,7.86e-50,59;CL:0000040,7.86e-50,59;CL:0000559,7.86e-50,59;CL:0000557,2.00e-47,67;CL:0000839,3.08e-43,66;CL:0000766,4.83e-43,72;CL:0000763,1.53e-35,108;CL:0000049,1.53e-35,108;CL:0000738,9.33e-28,136;CL:0002031,1.69e-24,120;CL:0002087,2.95e-23,115;CL:0000037,1.01e-22,168;CL:0002032,3.54e-22,161;CL:0000837,3.54e-22,161;CL:0000988,8.75e-21,177;CL:0000034,1.72e-11,441;CL:0000048,2.16e-11,427;CL:0000453,4.97e-11,5;CL:0000723,5.85e-11,433;CL:0000134,7.50e-10,354;CL:0002320,2.44e-09,361;CL:0000219,4.38e-09,386;CL:0002393,1.26e-07,9;CL:0002397,1.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;7.60e-47;42!CL:0000049;2.31e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.45e-26!80;UBERON:0001474!7.52e-24!86;UBERON:0004765!2.27e-21!101;UBERON:0001434!2.27e-21!101;UBERON:0002390!1.31e-19!102;UBERON:0003061!1.31e-19!102;UBERON:0002193!3.37e-18!112;UBERON:0002405!2.35e-17!115;UBERON:0002204!2.20e-14!167;UBERON:0001737!7.27e-09!9;UBERON:0002384!5.65e-08!375;UBERON:0003081!1.13e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!4.45e-26!80;UBERON:0001474!7.52e-24!86;UBERON:0004765!2.27e-21!101;UBERON:0001434!2.27e-21!101;UBERON:0002390!1.31e-19!102;UBERON:0003061!1.31e-19!102;UBERON:0002193!3.37e-18!112;UBERON:0002405!2.35e-17!115;UBERON:0002204!2.20e-14!167;UBERON:0001737!7.27e-09!9;UBERON:0002384!5.65e-08!375;UBERON:0003081!1.13e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.26e-07;9!UBERON:0001557;5.26e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-44,76;UBERON:0001474,3.58e-40,82;UBERON:0002405,1.42e-37,93;UBERON:0004765,3.46e-37,90;UBERON:0001434,4.27e-32,100;UBERON:0002390,2.06e-31,98;UBERON:0003061,2.06e-31,98;UBERON:0002193,2.07e-30,108;UBERON:0002204,1.24e-22,167;UBERON:0003081,2.84e-14,203;UBERON:0002384,1.21e-08,371;UBERON:0000926,9.55e-08,315;UBERON:0004120,9.55e-08,315;UBERON:0006603,9.55e-08,315;UBERON:0001737,4.67e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36162573225888,2.41077811209591,2.19093027116212,1.95173119516203,0,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,1.85779347979291,0,0,0,0.154934401160603,0,1.76160263600908,0,0,0,0,0,0,3.78035420826868,3.40088349319928,4.12392904019288,5.11343881192506,4.93401465626191,4.02618282163635,3.74000110018796,4.86705342405291,4.7296445977717,3.7922024881028,5.16387746867061,2.70852973188684,3.20011977222428,3.27487380069415,7.19115150224271,4.59125838556354,6.09765151444578,3.83602275479425,1.31940520074686,3.19141852194611,3.40979800426155,5.5139755339431,3.97169657283798,6.85104473895132,2.51248665256743,2.60741459210101,4.12658804939722,4.23779651843358,6.62899744777616,7.27863491114034,2.74631872205524,3.4016687994407,3.56419697364239,1.68492946719743,2.4028302854641,0.48217676009124,1.71007646244749,2.98375015798635,2.00930569141097,1.75996244461323,0.546138611262131,0,0,0.800791974072025,0.574752439954483,0,2.86216126360609,0,0,0,1.32171328579026,0,1.58030450865046,0,0,0,0.501559486172034,0.651844533267181,0.473447805734733,0,0.334231370655521,1.17842362989935,0.443067789167242,0.270803863765016,0.25618263945135,0.650296737799391,0.822189523018381,1.10540007114339,0.579606171470105,0.14828656316206,0.535081656179426,1.04535523804977,0.793165398882963,0,1.03088233644789,0.506039384039006,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,0,1.91793842765295,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,2.26304479546337,0,0,0,0,0,0,0,0,0,0,0.756962552626885,1.82488679537915,0,0,0,0,0,2.36613600079688,0.505754070234305,2.41011029883482,1.8749975364507,0.653638332277218,1.66089433377768,2.42696354688296,0.98110732562673,1.53898862778556,0,0,0,1.47008711385542,0,0,0,0,0,1.88724591328378,0,0,0.100528972411631,0,0.325808305310325,0,0,1.27523445472584,1.6437217193015,0,2.77791307545966,3.23432058798817,0,0,0,0,0,0.93733833986777,1.84780341018745,0.992425680696705,0,0,0,0,0.616339038092582,0.414656231081544,0.288239906833923,0.6312121671319,2.41291998310242,0,0,0,0,3.60411669412701,1.71495859578347,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,2.43247561282381,2.00902836572851,8.43335757932127,0.239624855491583,0,2.85273810081437,0.144781306667579,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,5.74144876487847,0,0,0,0,0,0,2.07970861530807,1.60586089917446,0.946214490203608,0.702848489956279,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0.0890320356467374,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,1.29070216983646,1.3754865741837,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.5745161103971,0,0.324621940274555,0,0,0.156679895773023,0,1.01575066680962,0,0,0,0,0.307240764308458,0,0,0,0,0,2.70455678475983,0,0,0,0,0,0,0,0.23874448473769,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.732780747214898,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.803765742325096,0.825236619583403,1.24632101408756,8.54900787895702,2.32140586367385,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0,0,0,0.147855149989634,0,1.34940933649081,0,5.39118070193112,0,1.5652351854352,0,2.28483127301277,0,0,0.107410557042488,1.39210127963548,1.19428766609585,0,6.18112269329027,4.37774335395695,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48178710330594,3.72021552877417,2.9441770966052,0,0,0,0,0,0,0,0,1.11903606175556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17144469965024,1.91107787795487,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36162573225888,2.41077811209591,2.19093027116212,1.95173119516203,0,0,0.313454721478088,0,0,0,0,0,0,0.786728553697808,0,1.85779347979291,0,0,0,0.154934401160603,0,1.76160263600908,0,0,0,0,0,0,3.78035420826868,3.40088349319928,4.12392904019288,5.11343881192506,4.93401465626191,4.02618282163635,3.74000110018796,4.86705342405291,4.7296445977717,3.7922024881028,5.16387746867061,2.70852973188684,3.20011977222428,3.27487380069415,7.19115150224271,4.59125838556354,6.09765151444578,3.83602275479425,1.31940520074686,3.19141852194611,3.40979800426155,5.5139755339431,3.97169657283798,6.85104473895132,2.51248665256743,2.60741459210101,4.12658804939722,4.23779651843358,6.62899744777616,7.27863491114034,2.74631872205524,3.4016687994407,3.56419697364239,1.68492946719743,2.4028302854641,0.48217676009124,1.71007646244749,2.98375015798635,2.00930569141097,1.75996244461323,0.546138611262131,0,0,0.800791974072025,0.574752439954483,0,2.86216126360609,0,0,0,1.32171328579026,0,1.58030450865046,0,0,0,0.501559486172034,0.651844533267181,0.473447805734733,0,0.334231370655521,1.17842362989935,0.443067789167242,0.270803863765016,0.25618263945135,0.650296737799391,0.822189523018381,1.10540007114339,0.579606171470105,0.14828656316206,0.535081656179426,1.04535523804977,0.793165398882963,0,1.03088233644789,0.506039384039006,0,0,0,0.301150238155546,0.127986611154418,0,0,0,0,0,0,0,0,1.91793842765295,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0,0,2.26304479546337,0,0,0,0,0,0,0,0,0,0,0.756962552626885,1.82488679537915,0,0,0,0,0,2.36613600079688,0.505754070234305,2.41011029883482,1.8749975364507,0.653638332277218,1.66089433377768,2.42696354688296,0.98110732562673,1.53898862778556,0,0,0,1.47008711385542,0,0,0,0,0,1.88724591328378,0,0,0.100528972411631,0,0.325808305310325,0,0,1.27523445472584,1.6437217193015,0,2.77791307545966,3.23432058798817,0,0,0,0,0,0.93733833986777,1.84780341018745,0.992425680696705,0,0,0,0,0.616339038092582,0.414656231081544,0.288239906833923,0.6312121671319,2.41291998310242,0,0,0,0,3.60411669412701,1.71495859578347,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,2.43247561282381,2.00902836572851,8.43335757932127,0.239624855491583,0,2.85273810081437,0.144781306667579,0,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,5.74144876487847,0,0,0,0,0,0,2.07970861530807,1.60586089917446,0.946214490203608,0.702848489956279,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.438519753291869,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0.0890320356467374,0,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,1.29070216983646,1.3754865741837,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.5745161103971,0,0.324621940274555,0,0,0.156679895773023,0,1.01575066680962,0,0,0,0,0.307240764308458,0,0,0,0,0,2.70455678475983,0,0,0,0,0,0,0,0.23874448473769,0.890894042497916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.732780747214898,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.803765742325096,0.825236619583403,1.24632101408756,8.54900787895702,2.32140586367385,0.0607495566580247,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77962244319307,0,0,0,0.147855149989634,0,1.34940933649081,0,5.39118070193112,0,1.5652351854352,0,2.28483127301277,0,0,0.107410557042488,1.39210127963548,1.19428766609585,0,6.18112269329027,4.37774335395695,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48178710330594,3.72021552877417,2.9441770966052,0,0,0,0,0,0,0,0,1.11903606175556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17144469965024,1.91107787795487,0,0,0,1.29485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@GNG5P2 | |short_description=p1@GNG5P2 | ||
}} | }} |
Latest revision as of 00:59, 19 September 2015
Short description: | p1@GNG5P2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNG5P2_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | 0bp_to_ENST00000372054_5end |
EntrezGene: | NA |
HGNC: | 24826 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-44 | 76 |
bone element | 3.58e-40 | 82 |
immune system | 1.42e-37 | 93 |
skeletal element | 3.46e-37 | 90 |
skeletal system | 4.27e-32 | 100 |
hematopoietic system | 2.06e-31 | 98 |
blood island | 2.06e-31 | 98 |
hemolymphoid system | 2.07e-30 | 108 |
musculoskeletal system | 1.24e-22 | 167 |
lateral plate mesoderm | 2.84e-14 | 203 |
connective tissue | 1.21e-08 | 371 |
mesoderm | 9.55e-08 | 315 |
mesoderm-derived structure | 9.55e-08 | 315 |
presumptive mesoderm | 9.55e-08 | 315 |
larynx | 4.67e-07 | 9 |