FFCP PHASE1:Hg19::chr1:67390665..67390698,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57708 | |EntrezGene=57708 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29657 | |HGNC=29657 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAD1 | |UniProt=Q5TAD1 | ||
|association_with_transcript=15bp_to_ENST00000371012_5end | |association_with_transcript=15bp_to_ENST00000371012_5end | ||
|cluster_id=chr1:67390665..67390698,+ | |||
|description=CAGE_peak_1_at_MIER1_5end | |description=CAGE_peak_1_at_MIER1_5end | ||
|id=chr1:67390665..67390698,+ | |id=chr1:67390665..67390698,+ | ||
|ontology_enrichment_celltype=CL:0000037!4.35e-32!172;CL:0000566!4.35e-32!172;CL:0002032!6.45e-29!165;CL:0000837!6.45e-29!165;CL:0000988!2.23e-28!182;CL:0000134!6.73e-27!358;CL:0002320!1.39e-25!365;CL:0000738!1.24e-24!140;CL:0000763!2.36e-24!112;CL:0000049!2.36e-24!112;CL:0000219!8.19e-24!390;CL:0000048!2.24e-22!430;CL:0000723!1.21e-21!436;CL:0000034!4.62e-21!444;CL:0002031!1.52e-20!124;CL:0000766!2.06e-19!76;CL:0002087!1.32e-18!119;CL:0000839!6.90e-17!70;CL:0000557!1.91e-16!71;CL:0002009!8.28e-14!65;CL:0002194!1.02e-13!63;CL:0000576!1.02e-13!63;CL:0000040!1.02e-13!63;CL:0000559!1.02e-13!63;CL:0002057!3.15e-11!42;CL:0000860!3.82e-10!45;CL:0002371!5.18e-09!591;CL:0000144!3.70e-07!625;CL:0000003!5.14e-07!722 | |ontology_enrichment_celltype=CL:0000037!4.35e-32!172;CL:0000566!4.35e-32!172;CL:0002032!6.45e-29!165;CL:0000837!6.45e-29!165;CL:0000988!2.23e-28!182;CL:0000134!6.73e-27!358;CL:0002320!1.39e-25!365;CL:0000738!1.24e-24!140;CL:0000763!2.36e-24!112;CL:0000049!2.36e-24!112;CL:0000219!8.19e-24!390;CL:0000048!2.24e-22!430;CL:0000723!1.21e-21!436;CL:0000034!4.62e-21!444;CL:0002031!1.52e-20!124;CL:0000766!2.06e-19!76;CL:0002087!1.32e-18!119;CL:0000839!6.90e-17!70;CL:0000557!1.91e-16!71;CL:0002009!8.28e-14!65;CL:0002194!1.02e-13!63;CL:0000576!1.02e-13!63;CL:0000040!1.02e-13!63;CL:0000559!1.02e-13!63;CL:0002057!3.15e-11!42;CL:0000860!3.82e-10!45;CL:0002371!5.18e-09!591;CL:0000144!3.70e-07!625;CL:0000003!5.14e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000766;3.94e-09;69!CL:0000576;6.95e-09;48!CL:0000763;1.40e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.76e-33,168;CL:0000988,7.21e-30,177;CL:0002032,7.79e-30,161;CL:0000837,7.79e-30,161;CL:0000134,8.62e-28,354;CL:0002320,1.93e-26,361;CL:0000738,1.43e-25,136;CL:0000763,1.70e-25,108;CL:0000049,1.70e-25,108;CL:0000219,1.33e-24,386;CL:0000048,4.96e-23,427;CL:0000723,2.79e-22,433;CL:0000034,1.10e-21,441;CL:0002031,1.93e-21,120;CL:0000766,9.48e-21,72;CL:0002087,1.84e-19,115;CL:0000839,3.68e-18,66;CL:0000557,1.13e-17,67;CL:0002009,6.08e-15,61;CL:0002194,7.05e-15,59;CL:0000576,7.05e-15,59;CL:0000040,7.05e-15,59;CL:0000559,7.05e-15,59;CL:0000473,8.50e-12,48;CL:0000234,8.50e-12,48;CL:0000860,3.15e-11,42;CL:0002057,3.15e-11,42 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-08;42!CL:0000049;1.45e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.06e-26!375;UBERON:0001474!2.38e-16!86;UBERON:0004765!8.75e-16!101;UBERON:0001434!8.75e-16!101;UBERON:0002390!2.95e-15!102;UBERON:0003061!2.95e-15!102;UBERON:0002371!1.98e-14!80;UBERON:0002193!1.52e-13!112;UBERON:0002405!3.25e-08!115;UBERON:0002204!4.86e-08!167 | |ontology_enrichment_uberon=UBERON:0002384!1.06e-26!375;UBERON:0001474!2.38e-16!86;UBERON:0004765!8.75e-16!101;UBERON:0001434!8.75e-16!101;UBERON:0002390!2.95e-15!102;UBERON:0003061!2.95e-15!102;UBERON:0002371!1.98e-14!80;UBERON:0002193!1.52e-13!112;UBERON:0002405!3.25e-08!115;UBERON:0002204!4.86e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.45e-27,371;UBERON:0001474,2.24e-17,82;UBERON:0002390,4.39e-16,98;UBERON:0003061,4.39e-16,98;UBERON:0001434,5.98e-16,100;UBERON:0004765,7.90e-16,90;UBERON:0002371,2.09e-15,76;UBERON:0002193,3.11e-14,108;UBERON:0002405,5.02e-12,93;UBERON:0002204,5.11e-08,167 | |||
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36613422 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|short_description=p1@MIER1 | |short_description=p1@MIER1 | ||
}} | }} |
Latest revision as of 01:19, 19 September 2015
Short description: | p1@MIER1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIER1_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000371012_5end |
EntrezGene: | MIER1 |
HGNC: | 29657 |
UniProt: | Q5TAD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.76e-33 | 168 |
hematopoietic cell | 7.21e-30 | 177 |
hematopoietic oligopotent progenitor cell | 7.79e-30 | 161 |
hematopoietic multipotent progenitor cell | 7.79e-30 | 161 |
mesenchymal cell | 8.62e-28 | 354 |
connective tissue cell | 1.93e-26 | 361 |
leukocyte | 1.43e-25 | 136 |
myeloid cell | 1.70e-25 | 108 |
common myeloid progenitor | 1.70e-25 | 108 |
motile cell | 1.33e-24 | 386 |
multi fate stem cell | 4.96e-23 | 427 |
somatic stem cell | 2.79e-22 | 433 |
stem cell | 1.10e-21 | 441 |
hematopoietic lineage restricted progenitor cell | 1.93e-21 | 120 |
myeloid leukocyte | 9.48e-21 | 72 |
nongranular leukocyte | 1.84e-19 | 115 |
myeloid lineage restricted progenitor cell | 3.68e-18 | 66 |
granulocyte monocyte progenitor cell | 1.13e-17 | 67 |
macrophage dendritic cell progenitor | 6.08e-15 | 61 |
monopoietic cell | 7.05e-15 | 59 |
monocyte | 7.05e-15 | 59 |
monoblast | 7.05e-15 | 59 |
promonocyte | 7.05e-15 | 59 |
defensive cell | 8.50e-12 | 48 |
phagocyte | 8.50e-12 | 48 |
classical monocyte | 3.15e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.15e-11 | 42 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.45e-27 | 371 |
bone element | 2.24e-17 | 82 |
hematopoietic system | 4.39e-16 | 98 |
blood island | 4.39e-16 | 98 |
skeletal system | 5.98e-16 | 100 |
skeletal element | 7.90e-16 | 90 |
bone marrow | 2.09e-15 | 76 |
hemolymphoid system | 3.11e-14 | 108 |
immune system | 5.02e-12 | 93 |
musculoskeletal system | 5.11e-08 | 167 |