FFCP PHASE1:Hg19::chr2:189876741..189876752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q9H394 | |UniProt=Q9H394 | ||
|association_with_transcript=112bp_to_AF130082_5end | |association_with_transcript=112bp_to_AF130082_5end | ||
|cluster_id=chr2:189876741..189876752,+ | |||
|coexpression_cluster_id=C292 | |coexpression_cluster_id=C292 | ||
|description=CAGE_peak_9_at_AF130082_5end | |description=CAGE_peak_9_at_AF130082_5end | ||
|id=chr2:189876741..189876752,+ | |id=chr2:189876741..189876752,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.71e-18!180;CL:0000057!2.34e-12!75;CL:0002334!1.19e-08!12;CL:0000680!2.05e-07!57;CL:0000056!2.05e-07!57;CL:0000355!2.05e-07!57 | |ontology_enrichment_celltype=CL:0000055!7.71e-18!180;CL:0000057!2.34e-12!75;CL:0002334!1.19e-08!12;CL:0000680!2.05e-07!57;CL:0000056!2.05e-07!57;CL:0000355!2.05e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002579;2.39e-09;3!CL:0000135;2.60e-09;3!CL:0000388;2.60e-09;3!CL:0002569;8.41e-08;6!CL:0002195;9.71e-07;2!CL:0002549;9.71e-07;2!CL:0002571;9.71e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.28e-09,3;CL:0000388,1.28e-09,3;CL:0002579,3.03e-09,3;CL:0002569,5.61e-08,6;CL:0002549,5.96e-07,2;CL:0002195,6.70e-07,2;CL:0002571,6.70e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000478!5.02e-08!24;UBERON:0001134!5.16e-08!61;UBERON:0002036!5.16e-08!61;UBERON:0003082!5.16e-08!61;UBERON:0003688!1.27e-07!6;UBERON:0002358!1.27e-07!6;UBERON:0003684!1.27e-07!6;UBERON:0001178!1.27e-07!6;UBERON:0002385!1.74e-07!63;UBERON:0001015!1.74e-07!63;UBERON:0000383!1.74e-07!63 | |ontology_enrichment_uberon=UBERON:0000478!5.02e-08!24;UBERON:0001134!5.16e-08!61;UBERON:0002036!5.16e-08!61;UBERON:0003082!5.16e-08!61;UBERON:0003688!1.27e-07!6;UBERON:0002358!1.27e-07!6;UBERON:0003684!1.27e-07!6;UBERON:0001178!1.27e-07!6;UBERON:0002385!1.74e-07!63;UBERON:0001015!1.74e-07!63;UBERON:0000383!1.74e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.52e-12;6!UBERON:0002358;2.52e-12;6!UBERON:0003684;2.52e-12;6!UBERON:0001178;2.52e-12;6!UBERON:0007846;2.60e-09;3!UBERON:0000043;2.60e-09;3!UBERON:0007845;2.60e-09;3!UBERON:0004457;4.42e-08;9!UBERON:0000042;4.42e-08;9!UBERON:0003422;8.41e-08;6!UBERON:0002331;3.93e-07;10!UBERON:0005629;9.71e-07;2!UBERON:0005358;9.71e-07;2!UBERON:0001886;9.71e-07;2!UBERON:0004086;9.71e-07;2!UBERON:0005282;9.71e-07;2!UBERON:0005281;9.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.52e-12,6;UBERON:0002358,3.52e-12,6;UBERON:0003684,3.52e-12,6;UBERON:0001178,3.52e-12,6;UBERON:0007846,1.28e-09,3;UBERON:0000043,1.28e-09,3;UBERON:0007845,1.28e-09,3;UBERON:0003422,5.61e-08,6;UBERON:0002331,2.88e-07,10;UBERON:0000358,2.88e-07,10;UBERON:0000307,2.88e-07,10;UBERON:0000091,2.88e-07,10;UBERON:0000087,2.88e-07,10;UBERON:0007010,2.88e-07,10;UBERON:0007806,2.88e-07,10;UBERON:0008780,2.88e-07,10;UBERON:0005728,2.88e-07,10;UBERON:0005629,5.96e-07,2;UBERON:0005358,5.96e-07,2;UBERON:0001886,5.96e-07,2;UBERON:0004086,5.96e-07,2;UBERON:0005282,5.96e-07,2;UBERON:0005281,5.96e-07,2 | |||
|phase1_expression=1.09007027562334,0.642301571672949,3.24195129420734,2.00146596706261,0.893922188854576,0,2.53299878168311,0,0.522371256399677,0,0,1.31064823278103,0.791300934685361,0.37129905888014,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.255725123687061,0.361439152384566,2.50668955317945,0.724232594804119,0.795285947051099,2.91980922181582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.759783069987479,0.662045904066094,1.14734648299525,0,0.560677600142307,3.20246987189115,0,0.311211035399766,0.269421344139376,0.163461903113459,2.4217188423189,1.72852777344,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0.340296549480063,0.179389635688862,0.85422955527427,0.847727604638247,0.300091096084402,0,0.515281080091258,0.930584281657949,0.843881661206331,0.0974370051611986,0,2.02509777013059,0.161646056818812,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0.43596006883328,0,1.93907573636667,0,0.845302752556,0.531876233169741,0,0,0,0,2.85955987316295,7.05408087008876,0.823240336780769,0.325736184293735,1.42156779497018,0,0.301439377059586,0,0.199945982364114,0,0,0,1.4377491329495,1.14861935834114,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0,2.07970861530807,1.24900292158013,0.157702415033935,0.468565659970853,1.20378439891088,2.27407504055985,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,1.24053903909388,1.84154367945675,0.841980283299221,8.45718385087626,1.02341449813341,1.60853921143608,0,0.154209693802656,0.355123450626254,0.574890092096664,0.519254429183621,0.232420756919918,0,0,0,1.03333003348146,0.728364672026868,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0.644521469209642,0,0.170453254832202,1.24644849905432,0,0,0,0,0,1.5740617341532,0,1.23213432070436,0,0.869932992075073,0,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0.855877976067841,0,0,1.07923474549989,0.823611089208164,0.117812402345686,0.202182481573316,0,0,0,1.21856744815642,0,1.09199929126389,0.989838023675989,0,0,0,0,1.15755106853338,0.655894752046633,0.202910376962704,0,0,0.286822704408103,0.491245205065606,0.7133421029625,0,0,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,1.78178808499583,0.614321404198464,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0.622079175323615,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46205491157214,0.227884111694002,0,0,0,0.638002319463839,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,3.05515072466813,0,0,0,0,4.81546588379273,0,0,0,0,0.789168805698781,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35904206073614,0.836822770498666,0,0,0,0,0,1.28929632425987,0,0,0.229160424011684,0,0,0,0,0.53746777989381,5.04419836959365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0.653174720218818,0,0,3.57814845749386,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0,0,0,1.0062716070103,0,0,0.453692771289717,1.08806040407946,0.443565449968902,0.159296767163702,0,0.310525913752519,0.414706207840855,0.53168342911599,0.521745061811734,1.6528336989694,3.80805212168795,0.813741466409323,0,0.322231671127465,0,0.796191777397232,0,1.03018711554838,0,1.26184898228651,0.385239660814607,0.643324774124777,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,1.13503190713367,0,0,0.622077260032973,0,0,0,0.109209638192014,0,0,0,0,0.636008701306837,0,0,0.352675943690684,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,1.1441462864015,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,9.13158720509496,0,0,0,0,0.697448552208751,0.869291361512897,0.801711364730253,0,0.17071847709395,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,9.22850886812365,0,0,0.356760272332706,0,0,0,0,0.655678681511872,0,0,0,0,0,2.5359343655004,0.679708458751268,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,5.57992527250127,1.84870251452567,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,1.666451020246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| ||
|short_description=p9@AF130082 | |short_description=p9@AF130082 | ||
}} | }} |
Latest revision as of 01:43, 19 September 2015
Short description: | p9@AF130082 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AF130082_5end |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | 112bp_to_AF130082_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.28e-09 | 3 |
tendon cell | 1.28e-09 | 3 |
omentum preadipocyte | 3.03e-09 | 3 |
mesenchymal stem cell of umbilical cord | 5.61e-08 | 6 |
fibroblast of choroid plexus | 5.96e-07 | 2 |
hepatic stem cell | 6.70e-07 | 2 |
hepatic mesenchymal stem cell | 6.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.52e-12 | 6 |
peritoneum | 3.52e-12 | 6 |
abdominal cavity | 3.52e-12 | 6 |
visceral peritoneum | 3.52e-12 | 6 |
dense regular connective tissue | 1.28e-09 | 3 |
tendon | 1.28e-09 | 3 |
regular connective tissue | 1.28e-09 | 3 |
mesenchyme of umbilical cord | 5.61e-08 | 6 |
umbilical cord | 2.88e-07 | 10 |
blastocyst | 2.88e-07 | 10 |
blastula | 2.88e-07 | 10 |
bilaminar disc | 2.88e-07 | 10 |
inner cell mass | 2.88e-07 | 10 |
cleaving embryo | 2.88e-07 | 10 |
connecting stalk | 2.88e-07 | 10 |
inner cell mass derived epiblast | 2.88e-07 | 10 |
extraembryonic mesoderm | 2.88e-07 | 10 |
vascular plexus | 5.96e-07 | 2 |
ventricle of nervous system | 5.96e-07 | 2 |
choroid plexus | 5.96e-07 | 2 |
brain ventricle | 5.96e-07 | 2 |
ventricular system of brain | 5.96e-07 | 2 |
ventricular system of central nervous system | 5.96e-07 | 2 |