FFCP PHASE1:Hg19::chr10:72362665..72362683,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:72362665..72362683,-
|short_description=p5@PRF1
|description=CAGE_peak_5_at_PRF1_5end
|association_with_transcript=-134bp_to_ENST00000318971,ENST000004412...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5551 | |EntrezGene=5551 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9360 | |HGNC=9360 | ||
|TSSclassifier=strong | |||
|UniProt=P14222 | |UniProt=P14222 | ||
|association_with_transcript=-134bp_to_ENST00000318971,ENST00000441259,NM_001083116,NM_005041,uc001jrf.3,uc009xqg.2_5end | |||
|cluster_id=chr10:72362665..72362683,- | |||
|coexpression_cluster_id=C1593 | |||
|description=CAGE_peak_5_at_PRF1_5end | |||
|id=chr10:72362665..72362683,- | |||
|ontology_enrichment_celltype=CL:0000791!2.07e-24!18;CL:0000789!2.07e-24!18;CL:0002420!2.07e-24!18;CL:0002419!2.07e-24!18;CL:0000790!2.07e-24!18;CL:0000625!4.28e-23!11;CL:0000084!1.23e-21!25;CL:0000827!1.23e-21!25;CL:0000988!5.26e-15!182;CL:0000037!6.73e-14!172;CL:0000566!6.73e-14!172;CL:0000080!2.00e-12!6;CL:0000738!2.29e-12!140;CL:0002032!2.35e-12!165;CL:0000837!2.35e-12!165;CL:0000838!9.25e-12!52;CL:0002087!1.10e-11!119;CL:0000542!1.98e-11!53;CL:0000051!1.98e-11!53;CL:0002031!4.72e-09!124;CL:0000623!7.10e-08!3;CL:0000825!7.10e-08!3;CL:0000842!4.42e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.06e-43;11!CL:0000791;3.18e-39;18!CL:0000789;3.18e-39;18!CL:0002419;3.18e-39;18!CL:0000084;3.65e-39;25!CL:0000623;5.40e-20;3!CL:0000542;7.46e-15;53!CL:0000226;5.39e-09;3!CL:0000842;5.39e-09;3!CL:0002087;2.86e-08;104!CL:0002127;6.59e-08;1!CL:0000911;6.59e-08;1!CL:0000814;6.59e-08;1!CL:0000895;3.30e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.22e-44,11;CL:0000791,1.89e-39,18;CL:0000789,1.89e-39,18;CL:0002420,1.89e-39,18;CL:0002419,1.89e-39,18;CL:0000790,1.89e-39,18;CL:0000084,2.35e-39,25;CL:0000827,2.35e-39,25;CL:0000838,2.11e-27,52;CL:0000542,8.02e-27,53;CL:0000051,8.02e-27,53;CL:0000623,5.41e-20,3;CL:0000825,5.41e-20,3;CL:0002087,4.43e-19,115;CL:0000738,3.44e-17,136;CL:0002031,1.80e-14,120;CL:0000988,1.50e-13,177;CL:0000893,2.64e-13,2;CL:0002489,2.64e-13,2;CL:0000809,2.64e-13,2;CL:0000808,2.64e-13,2;CL:0000894,2.64e-13,2;CL:0000806,2.64e-13,2;CL:0000807,2.64e-13,2;CL:0000805,2.64e-13,2;CL:0002425,2.64e-13,2;CL:0000037,4.48e-13,168;CL:0002032,4.72e-11,161;CL:0000837,4.72e-11,161;CL:0000226,6.22e-09,3;CL:0000842,6.22e-09,3;CL:0002127,6.59e-08,1;CL:0000914,6.59e-08,1;CL:0000911,6.59e-08,1;CL:0000814,6.59e-08,1;CL:0002042,6.59e-08,1;CL:0002039,6.59e-08,1;CL:0002040,6.59e-08,1;CL:0002041,6.59e-08,1;CL:0000810,4.34e-07,1;CL:0000895,4.34e-07,1;CL:0002436,4.34e-07,1;CL:0002427,4.34e-07,1;CL:0002428,4.34e-07,1;CL:0002429,4.34e-07,1;CL:0002433,4.34e-07,1;CL:0002431,4.34e-07,1;CL:0002432,4.34e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.18e-39;18!CL:0000051;7.46e-15;53!CL:0002425;2.00e-13;2!CL:0002427;3.30e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.56e-29!15;UBERON:0000179!1.56e-29!15;UBERON:0000463!1.56e-29!15;UBERON:0002390!4.27e-13!102;UBERON:0003061!4.27e-13!102;UBERON:0002193!5.80e-12!112;UBERON:0004177!1.61e-09!7;UBERON:0002370!3.68e-08!4;UBERON:0005058!3.68e-08!4;UBERON:0009113!3.68e-08!4;UBERON:0003295!3.68e-08!4;UBERON:0005562!3.68e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.59e-46;15!UBERON:0000179;1.59e-46;15!UBERON:0000463;1.59e-46;15!UBERON:0002390;1.31e-19;32!UBERON:0002193;1.55e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.95e-46,15;UBERON:0000179,3.95e-46,15;UBERON:0000463,3.95e-46,15;UBERON:0002390,3.74e-12,98;UBERON:0003061,3.74e-12,98;UBERON:0002193,9.61e-11,108;UBERON:0002370,4.49e-07,4;UBERON:0005058,4.49e-07,4;UBERON:0009113,4.49e-07,4;UBERON:0003295,4.49e-07,4;UBERON:0005562,4.49e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.15148819429164,0.464448369948228,0,0,0,0,0,0,0.553995408531877,1.40381113229099,1.51907609501096,0.223915474239924,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.612167784741805,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0,0.640456598628376,0.260118695119756,1.80881695064044,2.76350017785848,0.579606171470105,0,0,0,0.566546713487831,1.14966148080576,0.68725489096526,0.506039384039006,1.91139248594458,1.95325036156926,0.950452044448374,2.71035214339991,3.19966527886046,4.99722906209383,2.8413270245282,0.821127996921047,2.41928091869679,2.40696176205157,2.75166367377318,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.199748103411,4.53170748464433,4.74380664690938,6.54549485026717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,0.431428401637234,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,0.764637207142375,1.13929437434833,4.04994018278241,1.23408681925858,1.29694662238543,1.08006287447623,3.96562588147135,0,0,0,0,0,0,0,0.59873811429845,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,3.67763168115679,0,0,0,0,0,0.140669416410513,0,9.3938208309253,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0.831058409500782,0,0,0.335643173951685,0,0.317873157960757,0,0,0,0,0,0,0,0.593042257361244,0.617819694732514,1.46190729307638,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0.640724475406168,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.257831551894309,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@PRF1 | |||
}} | }} |
Latest revision as of 02:33, 19 September 2015
Short description: | p5@PRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRF1_5end |
Coexpression cluster: | C1593_anaplastic_NK_blood_Natural_CD8_Whole_adult |
Association with transcript: | -134bp_to_ENST00000318971, ENST00000441259, NM_001083116, NM_005041, uc001jrf.3, uc009xqg.2_5end |
EntrezGene: | PRF1 |
HGNC: | 9360 |
UniProt: | P14222 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 3.95e-46 | 15 |
haemolymphatic fluid | 3.95e-46 | 15 |
organism substance | 3.95e-46 | 15 |
hematopoietic system | 3.74e-12 | 98 |
blood island | 3.74e-12 | 98 |
hemolymphoid system | 9.61e-11 | 108 |
thymus | 4.49e-07 | 4 |
hemolymphoid system gland | 4.49e-07 | 4 |
thymic region | 4.49e-07 | 4 |
pharyngeal gland | 4.49e-07 | 4 |
thymus primordium | 4.49e-07 | 4 |