FFCP PHASE1:Hg19::chr1:68299436..68299494,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:68299436..68299494,-
|short_description=p3@GNG12
|description=CAGE_peak_3_at_GNG12_5end
|association_with_transcript=-281bp_to_NM_018841_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55970 | |EntrezGene=55970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19663 | |HGNC=19663 | ||
|TSSclassifier=strong | |||
|UniProt=Q69YP5,Q9UBI6 | |UniProt=Q69YP5,Q9UBI6 | ||
|association_with_transcript=-281bp_to_NM_018841_5end | |||
|cluster_id=chr1:68299436..68299494,- | |||
|description=CAGE_peak_3_at_GNG12_5end | |||
|id=chr1:68299436..68299494,- | |||
|ontology_enrichment_celltype=CL:0000055!1.25e-28!180;CL:0000222!1.00e-18!119;CL:0000057!1.64e-16!75;CL:0000680!1.44e-12!57;CL:0000056!1.44e-12!57;CL:0000355!1.44e-12!57;CL:0000220!1.82e-12!246;CL:0002321!5.86e-12!248;CL:0000187!1.40e-11!54;CL:0000359!1.49e-11!32;CL:0000183!1.47e-10!59;CL:0000192!4.69e-10!42;CL:0000514!4.69e-10!42;CL:0000393!5.39e-10!60;CL:0000211!5.39e-10!60;CL:0000213!2.00e-08!57;CL:0000215!2.00e-08!57;CL:0000136!9.83e-08!15;CL:0002620!1.28e-07!23;CL:0002139!1.60e-07!24;CL:0000076!5.66e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.31e-11;32!CL:0000136;6.92e-10;13!CL:0002494;7.34e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.33e-19,121;CL:0000057,6.67e-15,76;CL:0000359,2.46e-12,32;CL:0000680,3.09e-10,58;CL:0000056,3.09e-10,58;CL:0000355,3.09e-10,58;CL:0000213,4.02e-10,58;CL:0000215,4.02e-10,58;CL:0000136,7.37e-10,15;CL:0000187,4.24e-09,55;CL:0002321,4.72e-09,250;CL:0000192,3.99e-08,43;CL:0000514,3.99e-08,43;CL:0000393,3.44e-07,61;CL:0000211,3.44e-07,61;CL:0002494,6.12e-07,16;CL:0002139,7.99e-07,24;CL:0002620,9.96e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.51e-20!69;UBERON:0004872!9.72e-20!84;UBERON:0001981!6.42e-19!60;UBERON:0007500!6.42e-19!60;UBERON:0004537!6.42e-19!60;UBERON:0006965!6.42e-19!60;UBERON:0001637!7.16e-18!42;UBERON:0003509!7.16e-18!42;UBERON:0004572!7.16e-18!42;UBERON:0002049!2.84e-16!79;UBERON:0007798!2.84e-16!79;UBERON:0000914!1.16e-14!83;UBERON:0002329!1.16e-14!83;UBERON:0003077!1.16e-14!83;UBERON:0003059!1.16e-14!83;UBERON:0007282!1.16e-14!83;UBERON:0009618!1.16e-14!83;UBERON:0007285!1.16e-14!83;UBERON:0004573!9.19e-14!33;UBERON:0004571!9.19e-14!33;UBERON:0003914!4.70e-12!118;UBERON:0004290!4.96e-12!70;UBERON:0004535!5.31e-12!110;UBERON:0002385!6.94e-12!63;UBERON:0001015!6.94e-12!63;UBERON:0000383!6.94e-12!63;UBERON:0001009!7.16e-12!113;UBERON:0001134!8.41e-12!61;UBERON:0002036!8.41e-12!61;UBERON:0003082!8.41e-12!61;UBERON:0000490!1.80e-11!138;UBERON:0000477!3.45e-11!286;UBERON:0000486!7.00e-11!82;UBERON:0003102!2.56e-10!95;UBERON:0005256!8.77e-10!143;UBERON:0000475!3.37e-09!365;UBERON:0000947!2.80e-08!21;UBERON:0010191!2.80e-08!21;UBERON:0000468!3.50e-08!659;UBERON:0002199!4.05e-08!45;UBERON:0002416!4.05e-08!45;UBERON:0002100!4.30e-08!216;UBERON:0004111!7.51e-08!241;UBERON:0000467!2.55e-07!625;UBERON:0000480!3.64e-07!626;UBERON:0000483!6.40e-07!309;UBERON:0006914!7.98e-07!25;UBERON:0000119!8.58e-07!312;UBERON:0002097!9.84e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.33e-14;42!UBERON:0003509;1.33e-14;42!UBERON:0004572;1.33e-14;42!UBERON:0004573;3.97e-14;33!UBERON:0004571;3.97e-14;33!UBERON:0007500;8.92e-11;56!UBERON:0001981;8.92e-11;56!UBERON:0004537;8.92e-11;56!UBERON:0000055;1.46e-10;65!UBERON:0000947;2.22e-08;21!UBERON:0010191;2.22e-08;21!UBERON:0002049;1.94e-07;75!UBERON:0007798;1.94e-07;75!UBERON:0001013;2.40e-07;14!UBERON:0003914;9.58e-07;74 | |||
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| ||
|short_description=p3@GNG12 | |||
}} | }} |
Latest revision as of 02:33, 19 September 2015
Short description: | p3@GNG12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNG12_5end |
Coexpression cluster: | NA |
Association with transcript: | -281bp_to_NM_018841_5end |
EntrezGene: | GNG12 |
HGNC: | 19663 |
UniProt: | Q69YP5Q9UBI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.33e-19 | 121 |
fibroblast | 6.67e-15 | 76 |
vascular associated smooth muscle cell | 2.46e-12 | 32 |
muscle precursor cell | 3.09e-10 | 58 |
myoblast | 3.09e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.09e-10 | 58 |
lining cell | 4.02e-10 | 58 |
barrier cell | 4.02e-10 | 58 |
fat cell | 7.37e-10 | 15 |
muscle cell | 4.24e-09 | 55 |
embryonic cell | 4.72e-09 | 250 |
smooth muscle cell | 3.99e-08 | 43 |
smooth muscle myoblast | 3.99e-08 | 43 |
electrically responsive cell | 3.44e-07 | 61 |
electrically active cell | 3.44e-07 | 61 |
cardiocyte | 6.12e-07 | 16 |
endothelial cell of vascular tree | 7.99e-07 | 24 |
skin fibroblast | 9.96e-07 | 23 |