FFCP PHASE1:Hg19::chr12:53818855..53818919,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=269 | |EntrezGene=269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=465 | |HGNC=465 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000548303,ENST00000550839,ENST00000552233_5end | |association_with_transcript=0bp_to_ENST00000548303,ENST00000550839,ENST00000552233_5end | ||
|cluster_id=chr12:53818855..53818919,+ | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_1_at_AMHR2_5end | |description=CAGE_peak_1_at_AMHR2_5end | ||
|id=chr12:53818855..53818919,+ | |id=chr12:53818855..53818919,+ | ||
|ontology_enrichment_celltype=CL:0002274!9.18e-12!5;CL:0000457!9.18e-12!5;CL:0002191!9.18e-12!5;CL:0000097!9.18e-12!5;CL:0000831!9.18e-12!5;CL:0002028!9.18e-12!5;CL:0002322!1.10e-09!5;CL:0000163!1.16e-08!9;CL:0000746!4.69e-07!3;CL:0000513!4.69e-07!3;CL:0000181!5.94e-07!12;CL:0000417!5.94e-07!12;CL:0000668!5.94e-07!12;CL:0000414!5.94e-07!12;CL:0000412!5.94e-07!12;CL:0000182!5.94e-07!12 | |ontology_enrichment_celltype=CL:0002274!9.18e-12!5;CL:0000457!9.18e-12!5;CL:0002191!9.18e-12!5;CL:0000097!9.18e-12!5;CL:0000831!9.18e-12!5;CL:0002028!9.18e-12!5;CL:0002322!1.10e-09!5;CL:0000163!1.16e-08!9;CL:0000746!4.69e-07!3;CL:0000513!4.69e-07!3;CL:0000181!5.94e-07!12;CL:0000417!5.94e-07!12;CL:0000668!5.94e-07!12;CL:0000414!5.94e-07!12;CL:0000412!5.94e-07!12;CL:0000182!5.94e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.11e-24;5!CL:0000163;5.65e-19;9!CL:0002322;2.08e-08;5!CL:0000746;3.65e-07;3!CL:0000151;4.05e-07;36!CL:0000632;6.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.17e-24,5;CL:0002028,1.17e-24,5;CL:0000163,6.50e-19,9;CL:0002322,1.85e-08,5;CL:0000763,1.38e-07,108;CL:0000049,1.38e-07,108;CL:0000151,3.49e-07,36;CL:0000746,3.66e-07,3;CL:0000513,3.66e-07,3;CL:0000632,6.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.08e-11;10!UBERON:0005564;1.08e-11;10!CL:0000513;3.65e-07;3 | |||
|ontology_enrichment_disease=DOID:1036!2.22e-09!8;DOID:8692!1.28e-08!31 | |ontology_enrichment_disease=DOID:1036!2.22e-09!8;DOID:8692!1.28e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;3.65e-20;8!DOID:8692;6.49e-16;31!DOID:1240;6.94e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.36e-20,8;DOID:8692,3.27e-16,31;DOID:1240,1.99e-12,39;DOID:2531,5.47e-09,51;DOID:0060083,5.47e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0005057!9.51e-10!26;UBERON:0000948!5.11e-09!24;UBERON:0005498!5.11e-09!24;UBERON:0004140!5.11e-09!24;UBERON:0009881!5.11e-09!24;UBERON:0004141!5.11e-09!24;UBERON:0003084!5.11e-09!24;UBERON:0007005!5.11e-09!24;UBERON:0004139!5.11e-09!24;UBERON:0004291!5.11e-09!24;UBERON:0001048!9.49e-09!168;UBERON:0002107!2.39e-08!19;UBERON:0006925!2.39e-08!19;UBERON:0008836!2.39e-08!19;UBERON:0007100!1.05e-07!27;UBERON:0009497!4.82e-07!25;UBERON:0000015!4.82e-07!25;UBERON:0002423!4.82e-07!25;UBERON:0006235!4.82e-07!25;UBERON:0004161!4.82e-07!25;UBERON:0008835!6.45e-07!22;UBERON:0003894!6.45e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.32e-09;8!UBERON:0002106;4.67e-07;3!UBERON:0003135;5.37e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.38e-09,8;UBERON:0002106,4.53e-07,3;UBERON:0004854,4.53e-07,3;UBERON:0009034,4.53e-07,3;UBERON:0002095,4.53e-07,3;UBERON:0004782,4.53e-07,3;UBERON:0003281,4.53e-07,3;UBERON:0009664,4.53e-07,3;UBERON:0002296,4.53e-07,3;UBERON:0005602,4.53e-07,3;UBERON:0001179,4.53e-07,3;UBERON:0006293,4.53e-07,3;UBERON:0003135,5.54e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,10.7312137552582,0.639312809217652,0,0,0,0,0,0,0,0,2.94702919869853,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,1.74290914304278,1.24393266018445,2.52320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,1.6462960453256,4.41026134156626,0,0,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,4.43396914106349,70.7028925126205,37.7337170284205,45.8301451865937,53.148064472506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,2.95213181129735,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0339333903431,7.38524393686274,10.5477714605633,0.33307196799782,14.098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,13.1307228701124,6.31667849728106,8.23462644134506,4.86682602229944,3.60532092175952,2.86085842164682,0,0,0.424059214301822,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0,0,0.414752765588989,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.213452994739353,0,0,0,1.02956998717179,0,0,0,0,0,0,0,0,0,0,2.14882720709979,0,0.558564802544508,0.229160424011684,0,0,0,0,5.1059439089912,0,19.8043114196672,0.157566364614447,0.494495150286999,0.13480708770837,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,1.14929529049075,0,0,0.58620893471233,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621051827505038,0,0,0,0.751288044986092,0,0,0,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3567595807378,0,4.68908406739856,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,1.5299169235277,0,0.245148321753905,0,0,0,0.4226557275834,0,2.44358186747619,5.35000470180691,0,0,0,0,0.730336388246517,0,0,0,0,0,4.7612415646386,0,0,0,0,0,2.02717601618299,2.2437542543236,0.26721740526556,7.1678021637179,0,6.21385325389563,8.30688803484153,0,0,0,0,0,0.124149428591716,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 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| ||
|short_description=p1@AMHR2 | |short_description=p1@AMHR2 | ||
}} | }} |
Latest revision as of 03:00, 19 September 2015
Short description: | p1@AMHR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AMHR2_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 0bp_to_ENST00000548303, ENST00000550839, ENST00000552233_5end |
EntrezGene: | AMHR2 |
HGNC: | 465 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.17e-24 | 5 |
basophil mast progenitor cell | 1.17e-24 | 5 |
endocrine cell | 6.50e-19 | 9 |
embryonic stem cell | 1.85e-08 | 5 |
myeloid cell | 1.38e-07 | 108 |
common myeloid progenitor | 1.38e-07 | 108 |
secretory cell | 3.49e-07 | 36 |
cardiac muscle cell | 3.66e-07 | 3 |
cardiac muscle myoblast | 3.66e-07 | 3 |
hepatic stellate cell | 6.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.38e-09 | 8 |
spleen | 4.53e-07 | 3 |
gastrointestinal system mesentery | 4.53e-07 | 3 |
stomach region | 4.53e-07 | 3 |
mesentery | 4.53e-07 | 3 |
gastrointestinal system serosa | 4.53e-07 | 3 |
mesentery of stomach | 4.53e-07 | 3 |
gut mesentery | 4.53e-07 | 3 |
dorsal mesentery | 4.53e-07 | 3 |
dorsal mesogastrium | 4.53e-07 | 3 |
peritoneal cavity | 4.53e-07 | 3 |
spleen primordium | 4.53e-07 | 3 |
male reproductive organ | 5.54e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.36e-20 | 8 |
myeloid leukemia | 3.27e-16 | 31 |
leukemia | 1.99e-12 | 39 |
hematologic cancer | 5.47e-09 | 51 |
immune system cancer | 5.47e-09 | 51 |