FFCP PHASE1:Hg19::chr12:53835403..53835414,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54458 | |EntrezGene=54458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24528 | |HGNC=24528 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZ81 | |UniProt=Q9NZ81 | ||
|association_with_transcript=14bp_to_ENST00000429243_5end | |association_with_transcript=14bp_to_ENST00000429243_5end | ||
|cluster_id=chr12:53835403..53835414,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_PRR13_5end | |description=CAGE_peak_7_at_PRR13_5end | ||
|id=chr12:53835403..53835414,+ | |id=chr12:53835403..53835414,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.02e-14!42;CL:0000860!5.15e-14!45;CL:0000766!7.83e-12!76;CL:0000763!6.79e-11!112;CL:0000049!6.79e-11!112;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0002009!2.37e-10!65;CL:0000557!5.53e-08!71;CL:0000839!7.75e-08!70 | |ontology_enrichment_celltype=CL:0002057!1.02e-14!42;CL:0000860!5.15e-14!45;CL:0000766!7.83e-12!76;CL:0000763!6.79e-11!112;CL:0000049!6.79e-11!112;CL:0002194!1.05e-10!63;CL:0000576!1.05e-10!63;CL:0000040!1.05e-10!63;CL:0000559!1.05e-10!63;CL:0002009!2.37e-10!65;CL:0000557!5.53e-08!71;CL:0000839!7.75e-08!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.11e-15;33!CL:0002057;1.11e-15;33!CL:0000576;1.36e-13;48!CL:0000473;9.49e-12;39!CL:0000234;9.49e-12;39!CL:0000094;2.69e-11;8!CL:0000081;1.29e-10;11!CL:0000766;6.37e-10;69!CL:0000775;1.04e-08;3!CL:0000708;3.17e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.26e-23,42;CL:0002057,7.26e-23,42;CL:0000766,1.76e-20,72;CL:0000473,3.65e-19,48;CL:0000234,3.65e-19,48;CL:0002194,2.44e-15,59;CL:0000576,2.44e-15,59;CL:0000040,2.44e-15,59;CL:0000559,2.44e-15,59;CL:0002009,1.25e-14,61;CL:0000763,8.11e-14,108;CL:0000049,8.11e-14,108;CL:0000839,4.80e-13,66;CL:0000557,9.31e-13,67;CL:0000094,2.73e-11,8;CL:0000081,1.31e-10,11;CL:0000738,3.97e-10,136;CL:0002032,3.32e-09,161;CL:0000837,3.32e-09,161;CL:0000775,1.06e-08,3;CL:0000037,1.89e-08,168;CL:0000988,2.99e-08,177;CL:0002087,1.03e-07,115;CL:0000708,2.32e-07,3;CL:0002031,4.04e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;8.75e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.01e-12!102;UBERON:0003061!7.01e-12!102;UBERON:0004765!1.06e-10!101;UBERON:0001434!1.06e-10!101;UBERON:0002193!1.89e-10!112;UBERON:0001474!4.28e-09!86;UBERON:0002371!2.23e-08!80;UBERON:0000926!3.53e-08!448;UBERON:0004120!3.53e-08!448;UBERON:0006603!3.53e-08!448;UBERON:0002204!4.78e-08!167;UBERON:0003081!1.91e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!7.01e-12!102;UBERON:0003061!7.01e-12!102;UBERON:0004765!1.06e-10!101;UBERON:0001434!1.06e-10!101;UBERON:0002193!1.89e-10!112;UBERON:0001474!4.28e-09!86;UBERON:0002371!2.23e-08!80;UBERON:0000926!3.53e-08!448;UBERON:0004120!3.53e-08!448;UBERON:0006603!3.53e-08!448;UBERON:0002204!4.78e-08!167;UBERON:0003081!1.91e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.62e-10;15!UBERON:0000179;9.62e-10;15!UBERON:0000463;9.62e-10;15!UBERON:0003210;3.17e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.79e-19,98;UBERON:0003061,3.79e-19,98;UBERON:0002193,9.38e-18,108;UBERON:0003081,1.47e-13,203;UBERON:0001474,2.12e-12,82;UBERON:0002371,1.29e-11,76;UBERON:0004765,1.29e-11,90;UBERON:0001434,1.45e-11,100;UBERON:0002405,2.81e-11,93;UBERON:0000178,9.77e-10,15;UBERON:0000179,9.77e-10,15;UBERON:0000463,9.77e-10,15;UBERON:0003210,2.32e-07,3 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0.522371256399677,0,2.09340350391728,1.09220686065086,0.263766978228454,0.74259811776028,0.662794751455832,0,0.602694528023977,0,0,0.369363174230364,0.612002073732759,0.626909442956176,0.286235987131057,0.547497700291537,0.125542639594803,0.305653622991805,0.164201178899891,0.157421562627358,2.36018566109342,0.383829398097213,0.464448369948228,1.83884244895785,0.6024118375565,0,0.232401601740905,0.142169232487422,0.880801318004542,2.21598163412751,0.802177789880567,0.434021741431704,0.223915474239924,0,0,1.74477886535478,1.88937971844405,2.91100873425379,0.929716147622738,0.411167888021826,0.309706370895104,1.1507695692886,0.512321413058201,0.945928919554341,1.37898272294647,0.645484683583826,2.70852973188684,1.50593871634084,0.545812300115692,0.449446968890169,2.14258724659632,0.320929027076094,1.91801137739712,1.31940520074686,1.19678194572979,2.55734850319616,1.45104619314292,0.56738522469114,0,0.502497330513487,0,1.73751075764093,0.605399502633369,1.47311054395026,0.316462387440884,3.59133986730301,1.70083439972035,1.88692780957538,4.83013113929929,3.90459921387916,4.17886525412408,1.99508920618874,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,1.05353633910031,0.196709770113833,0,0,0.167186495390678,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0.950452044448374,0.602300476311091,0,0,0.710331756132051,0,0,0,0,0,0,0.255725123687061,0,0.50133791063589,0.579386075843295,0.795285947051099,0,0.283604451492204,0.443458794925128,0.175669571386252,0.130979075497713,0,1.11235332835329,0,0.174129737299267,0.26591592103773,0.476981248610684,0,0,0,0,0,0.56530794192401,1.25849830862972,0.825354125820202,0.208994966536811,0.258416759169329,0,0,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0.0892997282840798,0.673588117878509,0.450445921933289,0,0,0,9.22462922052443,27.1446184903828,0,0.993943903390637,0.759783069987479,0,0,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.404132016209064,0.326923806226917,0.756787138224657,0,0.937285727335186,0.624320153660641,0,0.448346041655403,0,0,0.140450806702248,0.408308342509787,0.491337269247072,0.619954687054593,0,0.741800787835671,0,0,0.505008341862199,0.500474079487857,0.554128230968366,1.31693286264251,0.30648779579902,1.05166641234618,0.453728732640084,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0.168776332241266,0.68205903612839,0.504867548488229,0,0,0.355009592516614,0.10075209822764,0.508681776931463,0,0,0.286804595389004,0.121973706129595,0,0.232387885739037,0.207322110030741,0.504641701751257,0,0,0,0,0.928735856063958,0,0.118306800039844,0.168584690078102,0.482022059766964,0.110293972732394,0.653638332277218,0.237270619111097,0.134831308160164,0.196221465125346,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.614942192715568,0.343135620597051,0.109750285408626,0,0,0.370353780634118,1.62904152655162,1.03993478527958,0,0,0.469634776943287,0.433099343283221,0,0.380508304469197,0,0,0.738651018262192,0.234004265139238,0.297262324577456,0,0.503946384596579,0,0,0,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,0,0,0,0.285826432630578,1.68196626518041,2.1798003441664,1.24675085895615,0,3.57656445851882,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.266422179016099,0,3.25572963234866,0.823240336780769,0.325736184293735,0,1.58390374586686,0,0,0.199945982364114,0,0,0,0.479249710983165,2.29723871668228,0,0.144781306667579,0,0.179060963239896,0.336255431980582,0,0,0,0.254094624222463,0,0,0.167516265334349,0,44.1914144128838,26.9245313283622,36.8829806958072,0.49076596687656,1.00034104211935,0.542530047399471,0,0.178428988797162,0.315404830067869,0,0.300946099727719,0,0,3.32112799267718,1.10621501125022,0.347534457872331,0.391602314925481,0,0.413536052245775,0.862856803274467,0.426910231213777,1.21251028578504,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0.308419387605311,0,0.246381468041427,0,0.232420756919918,0.483437798366489,0,0.460404944679482,0.459257792658427,0.728364672026868,0.262248829918848,0,0,0,0,0.211103257785751,0,0.170093705276516,1.29549549661284,0,0,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.366277859273374,0.247528499761764,0,0,0,0.386682873168488,0,0.460511024178389,0.275673144969061,0.322260734604821,0.145016693914229,0.170453254832202,0.445160178233687,0,0.192190067365106,0.127612712494584,0.50578890427775,0,0,1.3940745403212,0,1.06461206063404,0,0.55597265731176,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0.404364963146632,1.58510321173008,0,0.48763373908959,0.243713489631284,1.05650146756755,0.409499734223957,0,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0.405820753925408,0.92947049429925,0.845086807596724,0.286822704408103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| ||
|short_description=p7@PRR13 | |short_description=p7@PRR13 | ||
}} | }} |
Latest revision as of 03:03, 19 September 2015
Short description: | p7@PRR13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRR13_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 14bp_to_ENST00000429243_5end |
EntrezGene: | PRR13 |
HGNC: | 24528 |
UniProt: | Q9NZ81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.26e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.26e-23 | 42 |
myeloid leukocyte | 1.76e-20 | 72 |
defensive cell | 3.65e-19 | 48 |
phagocyte | 3.65e-19 | 48 |
monopoietic cell | 2.44e-15 | 59 |
monocyte | 2.44e-15 | 59 |
monoblast | 2.44e-15 | 59 |
promonocyte | 2.44e-15 | 59 |
macrophage dendritic cell progenitor | 1.25e-14 | 61 |
myeloid cell | 8.11e-14 | 108 |
common myeloid progenitor | 8.11e-14 | 108 |
myeloid lineage restricted progenitor cell | 4.80e-13 | 66 |
granulocyte monocyte progenitor cell | 9.31e-13 | 67 |
granulocyte | 2.73e-11 | 8 |
blood cell | 1.31e-10 | 11 |
leukocyte | 3.97e-10 | 136 |
hematopoietic oligopotent progenitor cell | 3.32e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.32e-09 | 161 |
neutrophil | 1.06e-08 | 3 |
hematopoietic stem cell | 1.89e-08 | 168 |
hematopoietic cell | 2.99e-08 | 177 |
nongranular leukocyte | 1.03e-07 | 115 |
leptomeningeal cell | 2.32e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 4.04e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.79e-19 | 98 |
blood island | 3.79e-19 | 98 |
hemolymphoid system | 9.38e-18 | 108 |
lateral plate mesoderm | 1.47e-13 | 203 |
bone element | 2.12e-12 | 82 |
bone marrow | 1.29e-11 | 76 |
skeletal element | 1.29e-11 | 90 |
skeletal system | 1.45e-11 | 100 |
immune system | 2.81e-11 | 93 |
blood | 9.77e-10 | 15 |
haemolymphatic fluid | 9.77e-10 | 15 |
organism substance | 9.77e-10 | 15 |
blood-cerebrospinal fluid barrier | 2.32e-07 | 3 |