FFCP PHASE1:Hg19::chr6:46761118..46761132,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4224 | |EntrezGene=4224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7015 | |HGNC=7015 | ||
|TSSclassifier=strong | |||
|UniProt=Q16819 | |UniProt=Q16819 | ||
|association_with_transcript=0bp_to_ENST00000230588,uc011dwh.1,uc011dwi.1_5end | |||
|cluster_id=chr6:46761118..46761132,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_MEP1A_5end | |||
|id=chr6:46761118..46761132,+ | |||
|ontology_enrichment_celltype=CL:0002322!5.74e-11!5;CL:0000181!1.16e-07!12;CL:0000417!1.16e-07!12;CL:0000668!1.16e-07!12;CL:0000414!1.16e-07!12;CL:0000412!1.16e-07!12;CL:0000182!1.16e-07!12;CL:0002563!6.32e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.07e-15;5!CL:0002563;1.92e-09;4!CL:0000148;6.93e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.99e-15,5;CL:0002563,1.92e-09,4;CL:0000148,6.84e-08,10;CL:0000541,6.84e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0001045;8.17e-10;1!UBERON:0000358;1.15e-09;1 | |||
|ontology_enrichment_disease=DOID:178!6.12e-07!1;DOID:326!6.12e-07!1;DOID:3978!6.12e-07!1;DOID:3394!6.12e-07!1;DOID:5844!6.12e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.35e-29!35;UBERON:0000160!2.13e-28!27;UBERON:0000059!8.95e-26!11;UBERON:0004907!4.43e-19!5;UBERON:0004921!5.63e-17!129;UBERON:0004185!5.63e-17!129;UBERON:0001155!1.16e-16!9;UBERON:0001052!8.67e-14!4;UBERON:0001007!2.28e-13!155;UBERON:0001555!2.28e-13!155;UBERON:0007026!2.28e-13!155;UBERON:0004119!6.96e-12!169;UBERON:0000925!6.96e-12!169;UBERON:0006595!6.96e-12!169;UBERON:0009854!2.31e-08!23;UBERON:0001046!1.41e-07!19;UBERON:0009856!2.48e-07!26;UBERON:0001154!2.52e-07!1;UBERON:0001153!2.52e-07!1;UBERON:0005057!3.26e-07!26;UBERON:0002107!3.28e-07!19;UBERON:0006925!3.28e-07!19;UBERON:0008836!3.28e-07!19;UBERON:0007029!4.85e-07!1;UBERON:0001242!6.32e-07!4;UBERON:0001262!6.32e-07!4;UBERON:0004786!6.32e-07!4;UBERON:0004808!6.32e-07!4;UBERON:0001277!6.32e-07!4;UBERON:0000077!9.14e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.09e-55;17!UBERON:0005409;5.84e-51;22!UBERON:0000059;8.97e-37;11!UBERON:0004921;6.59e-31;33!UBERON:0004907;8.13e-27;5!UBERON:0001155;1.29e-23;9!UBERON:0001052;3.23e-19;4!UBERON:0002108;2.69e-16;4!UBERON:0000922;4.09e-16;49!UBERON:0001555;1.14e-11;54!UBERON:0001007;5.49e-10;81!UBERON:0001154;8.17e-10;1!UBERON:0001153;8.17e-10;1!UBERON:0009854;8.17e-10;1!UBERON:0001242;1.92e-09;4!UBERON:0001262;1.92e-09;4!UBERON:0004786;1.92e-09;4!UBERON:0004808;1.92e-09;4!UBERON:0001277;1.92e-09;4!UBERON:0007029;2.36e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.17e-55,17;UBERON:0005409,7.50e-45,25;UBERON:0000059,9.22e-37,11;UBERON:0004907,8.41e-27,5;UBERON:0001155,1.29e-23,9;UBERON:0001052,3.33e-19,4;UBERON:0002108,2.69e-16,4;UBERON:0004921,2.67e-13,118;UBERON:0001046,7.30e-11,19;UBERON:0001007,2.40e-10,145;UBERON:0001555,2.40e-10,145;UBERON:0007026,2.40e-10,145;UBERON:0001154,8.17e-10,1;UBERON:0001153,8.17e-10,1;UBERON:0001045,8.17e-10,1;UBERON:0001242,1.92e-09,4;UBERON:0001262,1.92e-09,4;UBERON:0004786,1.92e-09,4;UBERON:0004808,1.92e-09,4;UBERON:0001277,1.92e-09,4;UBERON:0007029,2.08e-09,1;UBERON:0004119,3.93e-09,160;UBERON:0000925,3.93e-09,160;UBERON:0006595,3.93e-09,160;UBERON:0011216,1.01e-07,223 | |||
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|short_description=p1@MEP1A | |||
}} | }} |
Latest revision as of 03:30, 19 September 2015
Short description: | p1@MEP1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MEP1A_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000230588, uc011dwh.1, uc011dwi.1_5end |
EntrezGene: | MEP1A |
HGNC: | 7015 |
UniProt: | Q16819 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.99e-15 | 5 |
intestinal epithelial cell | 1.92e-09 | 4 |
melanocyte | 6.84e-08 | 10 |
melanoblast | 6.84e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.17e-55 | 17 |
gastrointestinal system | 7.50e-45 | 25 |
large intestine | 9.22e-37 | 11 |
lower digestive tract | 8.41e-27 | 5 |
colon | 1.29e-23 | 9 |
rectum | 3.33e-19 | 4 |
small intestine | 2.69e-16 | 4 |
subdivision of digestive tract | 2.67e-13 | 118 |
hindgut | 7.30e-11 | 19 |
digestive system | 2.40e-10 | 145 |
digestive tract | 2.40e-10 | 145 |
primitive gut | 2.40e-10 | 145 |
vermiform appendix | 8.17e-10 | 1 |
caecum | 8.17e-10 | 1 |
midgut | 8.17e-10 | 1 |
intestinal mucosa | 1.92e-09 | 4 |
wall of intestine | 1.92e-09 | 4 |
gastrointestinal system mucosa | 1.92e-09 | 4 |
gastrointestinal system epithelium | 1.92e-09 | 4 |
intestinal epithelium | 1.92e-09 | 4 |
surface | 2.08e-09 | 1 |
endoderm-derived structure | 3.93e-09 | 160 |
endoderm | 3.93e-09 | 160 |
presumptive endoderm | 3.93e-09 | 160 |
organ system subdivision | 1.01e-07 | 223 |