FFCP PHASE1:Hg19::chr6:47277594..47277605,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27242 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13469 | |||
|TSSclassifier=strong | |||
|UniProt=O75509 | |||
|association_with_transcript=35bp_to_ENST00000296861_5end | |||
|cluster_id=chr6:47277594..47277605,- | |||
|coexpression_cluster_id=C4609 | |||
|description=CAGE_peak_4_at_TNFRSF21_5end | |||
|id=chr6:47277594..47277605,- | |||
|ontology_enrichment_celltype=CL:0000066!1.10e-12!254;CL:0002076!1.28e-08!43;CL:0000220!1.40e-08!246;CL:0002321!4.20e-08!248;CL:0000223!2.22e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.56e-09;42!CL:0000136;8.11e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.18e-11,253;CL:0002076,1.26e-11,42;CL:0000223,4.35e-11,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!2.34e-20!625;UBERON:0000480!4.87e-20!626;UBERON:0000468!1.68e-19!659;UBERON:0002050!1.79e-16!605;UBERON:0005423!1.79e-16!605;UBERON:0000923!3.23e-16!604;UBERON:0005291!3.23e-16!604;UBERON:0006598!3.23e-16!604;UBERON:0002532!3.23e-16!604;UBERON:0000922!7.31e-16!612;UBERON:0004111!1.17e-15!241;UBERON:0000025!6.94e-13!194;UBERON:0000119!6.98e-13!312;UBERON:0000475!1.80e-12!365;UBERON:0000062!2.01e-12!511;UBERON:0000483!2.26e-12!309;UBERON:0000477!3.53e-12!286;UBERON:0002100!1.14e-09!216;UBERON:0000481!8.20e-09!347;UBERON:0003914!1.04e-08!118;UBERON:0000064!1.42e-07!219;UBERON:0004119!2.47e-07!169;UBERON:0000925!2.47e-07!169;UBERON:0006595!2.47e-07!169;UBERON:0000466!9.82e-07!126 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,8.83e-12,240;UBERON:0000025,4.28e-10,192;UBERON:0005423,1.20e-09,581;UBERON:0000922,2.33e-09,592;UBERON:0000119,6.19e-09,309;UBERON:0000483,1.26e-08,306;UBERON:0003914,3.13e-08,117;UBERON:0002050,4.72e-08,564;UBERON:0002100,1.27e-07,199;UBERON:0000923,3.61e-07,560;UBERON:0010316,3.61e-07,560;UBERON:0005291,3.61e-07,560;UBERON:0006598,3.61e-07,560;UBERON:0010317,3.61e-07,560;UBERON:0002532,3.61e-07,560;UBERON:0009569,7.64e-07,112 | |||
|phase1_expression=1.63510541343501,1.49870366723688,4.22863212287913,3.00219895059391,4.02264984984559,1.74467704820074,2.53299878168311,5.68547886084148,2.35067065379855,1.96587149201207,2.79120467188971,2.83973783769224,2.37390280405608,0.247532705920093,0,0.672325146451775,6.02694528023977,2.19093027116212,4.87932798790507,0.492484232307152,0.612002073732759,0.626909442956176,0.286235987131057,0.136874425072884,0.125542639594803,0.152826811495903,0.0821005894499457,0,0,0.767658796194425,4.4896675761662,2.75826367343678,3.614471025339,5.17655614233503,0,0,0,2.21598163412751,2.80762226458198,1.30206522429511,0.671746422719773,0.971680998056939,1.03030227053675,0.726991193897824,1.13362783106643,0.727752183563449,0.232429036905685,0,0,0.28769239232215,1.0246428261164,0,0,0,0,1.31769637679823,0.818718450173537,0.224723484445085,0.918251677112708,0.320929027076094,0.639337125799041,0.989553900560148,0,0,0,1.70215567407342,0,1.00499466102697,0,0.434377689410233,0.605399502633369,0,0.632924774881769,0.422510572623884,0.425208599930087,0.209658645508376,0.561643155732475,0.150176892841506,0.16072558669708,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0,0,0.144846518960824,0,0,0.189069634328136,0.443458794925128,0.175669571386252,1.89919659471683,5.10013403609559,3.70784442784429,2.27183175558278,3.48259474598534,1.72845348674525,8.34717185068697,10.8679033048224,4.45749001595478,0.993812036833525,0.860234595106124,1.73570250803797,1.13061588384802,3.35599548967925,3.02629846134074,1.04497483268405,0.775250277507987,2.84613010149368,4.35136796594071,2.81980521976403,2.28081631715554,6.10155143870424,2.20597848207521,3.24056779152704,0.357198913136319,0,0.112611480483322,0,0.949265659568129,0.916008719652036,0,0,17.8798561378439,0,0.886413581652058,0.132409180813219,0,0,1.12135520028461,1.06748995729705,1.48000529050296,7.46906484959439,1.34710672069688,1.9615428373615,1.36221684880438,1.15235184896,0.234321431833797,8.42832207441865,2.2818872861778,0.896692083310806,0.117434498643765,0,0.280901613404497,1.22492502752936,0.368502951935304,0.826606249406124,1.18800285728205,0.247266929278557,1.82032272387605,0.718618141816238,0,0.250237039743928,1.10825646193673,0,0.612975591598039,0.600952235626387,0.567160915800105,0.358779271377724,0,1.69545520927649,0.300091096084402,0.206105058476878,0.515281080091258,0,0.168776332241266,0.0974370051611986,0.757301322732344,0.828449087780694,0,0.355009592516614,0.604512589365842,0.169560592310488,3.28543450377605,3.54569956768085,5.44928731239107,0,0,0.116193942869518,0.932949495138334,0.504641701751257,0.36497735907583,7.8224766164908,2.57296375277154,4.14404764057442,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.441175890929576,0.653638332277218,0,0.404493924480493,0.588664395376038,0,0,0,2.4694440679884,2.94017422771084,0,0,0,0,1.47586126251736,0.343135620597051,6.03626569747441,0,0.904760751704678,9.0736676255359,0,0,0,0,1.05667824812239,1.58803092537181,1.85194205030644,0.951270761172991,0.790204397959275,1.71697232418975,0.492434012174795,7.72214074959484,1.78357394746474,1.87467667973554,3.69560682037491,2.41017665312057,4.11969204433102,4.35950907770943,1.53353071666084,0,1.05658120815871,12.8543431635279,22.1944728262121,11.1093341415214,0.063497894292169,0,0,0,0,0,0,2.24262168690721,2.1798003441664,0.7333828582095,0.129271715757778,3.57656445851882,0,0.797814349754612,2.08014873822732,0,0,0,1.71573592389777,9.76718889704597,0,0,1.42156779497018,0.791951872933429,22.9093926565285,7.84380112740265,23.4936529277834,1.2162378064119,1.00451418286425,6.32501818449095,0,0,0,0.434343920002738,0.410952645100767,0.537182889719687,0,0.197030760201927,0,0.128343036279748,0.254094624222463,2.60279707715243,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0.788512075169673,0.35142424497814,0,0,0,0,0.184369168541703,0.521301686808497,1.76221041716467,3.43143423810856,0.413536052245775,0.431428401637234,0.320182673410333,0,0,1.81434175997808,2.48107807818777,1.68808170616869,0.841980283299221,2.94720043288112,0.511707249066704,3.53878626515936,1.48418066444991,0.308419387605311,0.710246901252508,0.164254312027618,2.59627214591811,0.581051892299796,1.45031339509947,6.41620704970512,4.8802924136025,0.34444334449382,0.546273504020151,0.524497659837696,3.15839729035188,1.38627606787947,2.35304930753057,2.92278449306521,1.68882606228601,1.13733384070897,0.850468526382578,0.647747748306418,3.08454505380579,1.08378575017541,0.501689773854853,1.27438136522519,2.49322802678617,1.56712328305525,0,0,0.512900250232778,0.328014645699706,0,0.618246069886334,1.92295876118521,1.23764249880882,6.3169209179579,1.95018073810956,0,0.193341436584244,0.616194468458578,0.614014698904518,0.137836572484531,0.214840489736547,0.580066775656914,0.25567988224830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| |||
|short_description=p4@TNFRSF21 | |||
}} |
Latest revision as of 03:53, 19 September 2015
Short description: | p4@TNFRSF21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNFRSF21_5end |
Coexpression cluster: | C4609_Esophageal_Urothelial_Mesothelial_bile_epidermoid_Mesenchymal_gastric |
Association with transcript: | 35bp_to_ENST00000296861_5end |
EntrezGene: | TNFRSF21 |
HGNC: | 13469 |
UniProt: | O75509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.18e-11 | 253 |
endo-epithelial cell | 1.26e-11 | 42 |
endodermal cell | 4.35e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 8.83e-12 | 240 |
tube | 4.28e-10 | 192 |
developing anatomical structure | 1.20e-09 | 581 |
embryo | 2.33e-09 | 592 |
cell layer | 6.19e-09 | 309 |
epithelium | 1.26e-08 | 306 |
epithelial tube | 3.13e-08 | 117 |
embryonic structure | 4.72e-08 | 564 |
trunk | 1.27e-07 | 199 |
germ layer | 3.61e-07 | 560 |
germ layer / neural crest | 3.61e-07 | 560 |
embryonic tissue | 3.61e-07 | 560 |
presumptive structure | 3.61e-07 | 560 |
germ layer / neural crest derived structure | 3.61e-07 | 560 |
epiblast (generic) | 3.61e-07 | 560 |
subdivision of trunk | 7.64e-07 | 112 |