FFCP PHASE1:Hg19::chr22:19929284..19929333,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr22:19929284..19929333,+
|short_description=p1@COMT
|description=CAGE_peak_1_at_COMT_5end
|association_with_transcript=0bp_to_ENST00000403710,ENST00000407537,...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1312 | |EntrezGene=1312 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2228 | |HGNC=2228 | ||
|TSSclassifier=strong | |||
|UniProt=P21964 | |UniProt=P21964 | ||
|association_with_transcript=0bp_to_ENST00000403710,ENST00000407537,ENST00000467943_5end | |||
|cluster_id=chr22:19929284..19929333,+ | |||
|coexpression_cluster_id=C4089 | |||
|description=CAGE_peak_1_at_COMT_5end | |||
|id=chr22:19929284..19929333,+ | |||
|ontology_enrichment_celltype=CL:0002371!3.60e-19!591;CL:0000144!9.22e-16!625;CL:0000222!9.91e-15!119;CL:0000055!4.78e-13!180;CL:0000220!1.44e-11!246;CL:0000183!2.65e-11!59;CL:0002321!8.77e-11!248;CL:0000192!1.18e-10!42;CL:0000514!1.18e-10!42;CL:0000012!1.72e-10!682;CL:0000548!1.89e-10!679;CL:0000004!1.89e-10!679;CL:0000255!1.89e-10!679;CL:0000680!8.13e-10!57;CL:0000056!8.13e-10!57;CL:0000355!8.13e-10!57;CL:0000359!4.44e-09!32;CL:0000187!5.10e-09!54;CL:0000115!2.43e-08!35;CL:0002078!3.64e-08!44;CL:0000057!3.08e-07!75;CL:1000449!7.12e-07!16;CL:0000393!9.29e-07!60;CL:0000211!9.29e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.09e-08;32!CL:0000192;6.13e-08;43!CL:0000115;1.13e-07;36!CL:1000449;7.82e-07;15!CL:0000134;8.50e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.29e-15,121;CL:0002321,3.65e-11,250;CL:0000192,9.40e-11,43;CL:0000514,9.40e-11,43;CL:0000680,6.25e-10,58;CL:0000056,6.25e-10,58;CL:0000355,6.25e-10,58;CL:0000187,3.93e-09,55;CL:0000359,4.44e-09,32;CL:0000115,1.03e-08,36;CL:0002078,1.62e-08,45;CL:0000057,1.87e-07,76;CL:0000393,7.15e-07,61;CL:0000211,7.15e-07,61;CL:1000449,7.84e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;6.13e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.44e-13!79;UBERON:0007798!4.44e-13!79;UBERON:0000055!2.88e-11!69;UBERON:0005256!1.51e-10!143;UBERON:0000486!3.60e-10!82;UBERON:0004872!7.92e-10!84;UBERON:0003914!8.06e-10!118;UBERON:0000914!9.58e-10!83;UBERON:0002329!9.58e-10!83;UBERON:0003077!9.58e-10!83;UBERON:0003059!9.58e-10!83;UBERON:0007282!9.58e-10!83;UBERON:0009618!9.58e-10!83;UBERON:0007285!9.58e-10!83;UBERON:0001981!1.53e-09!60;UBERON:0007500!1.53e-09!60;UBERON:0004537!1.53e-09!60;UBERON:0006965!1.53e-09!60;UBERON:0004290!2.50e-09!70;UBERON:0001637!7.90e-09!42;UBERON:0003509!7.90e-09!42;UBERON:0004572!7.90e-09!42;UBERON:0001134!1.27e-08!61;UBERON:0002036!1.27e-08!61;UBERON:0003082!1.27e-08!61;UBERON:0000475!1.78e-08!365;UBERON:0000119!5.09e-08!312;UBERON:0004535!5.34e-08!110;UBERON:0000483!8.79e-08!309;UBERON:0002385!9.92e-08!63;UBERON:0001015!9.92e-08!63;UBERON:0000383!9.92e-08!63;UBERON:0001009!2.01e-07!113;UBERON:0004573!3.31e-07!33;UBERON:0004571!3.31e-07!33;UBERON:0002100!4.07e-07!216;UBERON:0000490!4.69e-07!138;UBERON:0000353!6.54e-07!17;UBERON:0004211!7.12e-07!16;UBERON:0001285!7.12e-07!16;UBERON:0007684!7.12e-07!16;UBERON:0003220!7.12e-07!16;UBERON:0004208!7.12e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;6.04e-07;74!UBERON:0006555;7.82e-07;15!UBERON:0004819;7.82e-07;15!UBERON:0001285;7.82e-07;15!UBERON:0007684;7.82e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,8.07e-13,78;UBERON:0007798,8.07e-13,78;UBERON:0007503,2.60e-12,78;UBERON:0000055,5.16e-11,68;UBERON:0000486,2.73e-10,83;UBERON:0003914,1.06e-09,117;UBERON:0007524,1.32e-09,73;UBERON:0004872,1.36e-09,83;UBERON:0002329,1.90e-09,71;UBERON:0003059,1.90e-09,71;UBERON:0007282,1.90e-09,71;UBERON:0004290,1.90e-09,71;UBERON:0009618,1.90e-09,71;UBERON:0007500,2.71e-09,59;UBERON:0001981,2.71e-09,59;UBERON:0004537,2.71e-09,59;UBERON:0006965,2.71e-09,59;UBERON:0003077,2.93e-09,72;UBERON:0007285,2.93e-09,72;UBERON:0000119,6.18e-09,309;UBERON:0003104,6.28e-09,160;UBERON:0009142,6.28e-09,160;UBERON:0001637,7.90e-09,42;UBERON:0003509,7.90e-09,42;UBERON:0004572,7.90e-09,42;UBERON:0001134,9.69e-09,62;UBERON:0002036,9.69e-09,62;UBERON:0003082,9.69e-09,62;UBERON:0000483,1.10e-08,306;UBERON:0005256,2.41e-08,122;UBERON:0000490,6.65e-08,148;UBERON:0002385,7.60e-08,64;UBERON:0001015,7.60e-08,64;UBERON:0000383,7.60e-08,64;UBERON:0004535,8.52e-08,109;UBERON:0001009,3.16e-07,112;UBERON:0004573,3.31e-07,33;UBERON:0004571,3.31e-07,33;UBERON:0004211,7.84e-07,15;UBERON:0009773,7.84e-07,15;UBERON:0001231,7.84e-07,15;UBERON:0001285,7.84e-07,15;UBERON:0007684,7.84e-07,15;UBERON:0004208,7.84e-07,15 | |||
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| ||
|short_description=p1@COMT | |||
}} | }} |
Latest revision as of 03:54, 19 September 2015
Short description: | p1@COMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COMT_5end |
Coexpression cluster: | C4089_Renal_Mesenchymal_Fibroblast_Pericytes_acute_Preadipocyte_Urothelial |
Association with transcript: | 0bp_to_ENST00000403710, ENST00000407537, ENST00000467943_5end |
EntrezGene: | COMT |
HGNC: | 2228 |
UniProt: | P21964 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.29e-15 | 121 |
embryonic cell | 3.65e-11 | 250 |
smooth muscle cell | 9.40e-11 | 43 |
smooth muscle myoblast | 9.40e-11 | 43 |
muscle precursor cell | 6.25e-10 | 58 |
myoblast | 6.25e-10 | 58 |
multi-potent skeletal muscle stem cell | 6.25e-10 | 58 |
muscle cell | 3.93e-09 | 55 |
vascular associated smooth muscle cell | 4.44e-09 | 32 |
endothelial cell | 1.03e-08 | 36 |
meso-epithelial cell | 1.62e-08 | 45 |
fibroblast | 1.87e-07 | 76 |
electrically responsive cell | 7.15e-07 | 61 |
electrically active cell | 7.15e-07 | 61 |
epithelial cell of nephron | 7.84e-07 | 15 |