FFCP PHASE1:Hg19::chr2:192542850..192542872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64859 | |EntrezGene=64859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26232 | |HGNC=26232 | ||
|TSSclassifier=strong | |||
|UniProt=F8WAF5,Q96AH0 | |UniProt=F8WAF5,Q96AH0 | ||
|association_with_transcript=0bp_to_ENST00000307834,ENST00000307849,ENST00000410026,ENST00000451500,ENST00000462712,NM_001031716,NR_045623,uc002usx.2,uc002usy.2,uc002usz.2_5end | |association_with_transcript=0bp_to_ENST00000307834,ENST00000307849,ENST00000410026,ENST00000451500,ENST00000462712,NM_001031716,NR_045623,uc002usx.2,uc002usy.2,uc002usz.2_5end | ||
|cluster_id=chr2:192542850..192542872,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_OBFC2A_5end | |description=CAGE_peak_1_at_OBFC2A_5end | ||
|id=chr2:192542850..192542872,+ | |id=chr2:192542850..192542872,+ | ||
|ontology_enrichment_celltype=CL:0000766!4.08e-26!76;CL:0000048!1.90e-25!430;CL:0000723!8.76e-24!436;CL:0000557!8.84e-24!71;CL:0002057!3.53e-23!42;CL:0002009!1.66e-22!65;CL:0002194!2.39e-21!63;CL:0000576!2.39e-21!63;CL:0000040!2.39e-21!63;CL:0000559!2.39e-21!63;CL:0000034!4.49e-21!444;CL:0000839!4.82e-21!70;CL:0000134!6.34e-21!358;CL:0000003!7.97e-21!722;CL:0000763!4.52e-20!112;CL:0000049!4.52e-20!112;CL:0002320!4.98e-20!365;CL:0000738!9.13e-20!140;CL:0000860!2.55e-19!45;CL:0000144!1.31e-18!625;CL:0002371!4.81e-18!591;CL:0000548!2.56e-17!679;CL:0000004!2.56e-17!679;CL:0000255!2.56e-17!679;CL:0000012!4.98e-17!682;CL:0002032!2.21e-16!165;CL:0000837!2.21e-16!165;CL:0002031!9.11e-16!124;CL:0000037!4.04e-15!172;CL:0000566!4.04e-15!172;CL:0000219!1.55e-14!390;CL:0002087!1.74e-14!119;CL:0000988!5.79e-14!182;CL:0000063!1.30e-12!578 | |ontology_enrichment_celltype=CL:0000766!4.08e-26!76;CL:0000048!1.90e-25!430;CL:0000723!8.76e-24!436;CL:0000557!8.84e-24!71;CL:0002057!3.53e-23!42;CL:0002009!1.66e-22!65;CL:0002194!2.39e-21!63;CL:0000576!2.39e-21!63;CL:0000040!2.39e-21!63;CL:0000559!2.39e-21!63;CL:0000034!4.49e-21!444;CL:0000839!4.82e-21!70;CL:0000134!6.34e-21!358;CL:0000003!7.97e-21!722;CL:0000763!4.52e-20!112;CL:0000049!4.52e-20!112;CL:0002320!4.98e-20!365;CL:0000738!9.13e-20!140;CL:0000860!2.55e-19!45;CL:0000144!1.31e-18!625;CL:0002371!4.81e-18!591;CL:0000548!2.56e-17!679;CL:0000004!2.56e-17!679;CL:0000255!2.56e-17!679;CL:0000012!4.98e-17!682;CL:0002032!2.21e-16!165;CL:0000837!2.21e-16!165;CL:0002031!9.11e-16!124;CL:0000037!4.04e-15!172;CL:0000566!4.04e-15!172;CL:0000219!1.55e-14!390;CL:0002087!1.74e-14!119;CL:0000988!5.79e-14!182;CL:0000063!1.30e-12!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-19;33!CL:0002057;3.02e-19;33!CL:0000473;7.97e-19;39!CL:0000234;7.97e-19;39!CL:0000576;9.69e-14;48!CL:0000766;2.75e-13;69!CL:0000763;8.69e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.96e-29,72;CL:0000557,1.45e-26,67;CL:0000048,1.55e-26,427;CL:0000473,2.14e-26,48;CL:0000234,2.14e-26,48;CL:0002009,2.28e-25,61;CL:0000723,7.86e-25,433;CL:0002194,3.63e-24,59;CL:0000576,3.63e-24,59;CL:0000040,3.63e-24,59;CL:0000559,3.63e-24,59;CL:0000839,1.31e-23,66;CL:0000860,3.53e-23,42;CL:0002057,3.53e-23,42;CL:0000034,4.74e-22,441;CL:0000134,5.04e-22,354;CL:0000763,8.06e-22,108;CL:0000049,8.06e-22,108;CL:0000738,3.02e-21,136;CL:0002320,4.30e-21,361;CL:0002032,1.50e-17,161;CL:0000837,1.50e-17,161;CL:0002031,3.85e-17,120;CL:0000037,3.38e-16,168;CL:0002087,8.10e-16,115;CL:0000219,2.11e-15,386;CL:0000988,6.95e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.16e-17;42!CL:0000049;2.62e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.97e-26!102;UBERON:0003061!3.97e-26!102;UBERON:0002193!5.44e-25!112;UBERON:0002204!1.75e-22!167;UBERON:0002371!1.85e-22!80;UBERON:0001474!2.05e-20!86;UBERON:0002384!6.60e-20!375;UBERON:0004765!5.15e-19!101;UBERON:0001434!5.15e-19!101;UBERON:0003081!4.52e-15!216;UBERON:0002405!2.81e-14!115;UBERON:0000926!8.42e-08!448;UBERON:0004120!8.42e-08!448;UBERON:0006603!8.42e-08!448 | |ontology_enrichment_uberon=UBERON:0002390!3.97e-26!102;UBERON:0003061!3.97e-26!102;UBERON:0002193!5.44e-25!112;UBERON:0002204!1.75e-22!167;UBERON:0002371!1.85e-22!80;UBERON:0001474!2.05e-20!86;UBERON:0002384!6.60e-20!375;UBERON:0004765!5.15e-19!101;UBERON:0001434!5.15e-19!101;UBERON:0003081!4.52e-15!216;UBERON:0002405!2.81e-14!115;UBERON:0000926!8.42e-08!448;UBERON:0004120!8.42e-08!448;UBERON:0006603!8.42e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.16e-28,98;UBERON:0003061,2.16e-28,98;UBERON:0002193,4.88e-27,108;UBERON:0002371,6.83e-25,76;UBERON:0002405,2.80e-23,93;UBERON:0002204,7.45e-23,167;UBERON:0001474,1.47e-22,82;UBERON:0004765,3.55e-21,90;UBERON:0002384,5.89e-21,371;UBERON:0001434,1.24e-19,100;UBERON:0003081,2.86e-16,203;UBERON:0000926,2.11e-15,315;UBERON:0004120,2.11e-15,315;UBERON:0006603,2.11e-15,315 | |||
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| ||
|short_description=p1@OBFC2A | |short_description=p1@OBFC2A | ||
}} | }} |
Latest revision as of 05:02, 19 September 2015
Short description: | p1@OBFC2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OBFC2A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000307834, ENST00000307849, ENST00000410026, ENST00000451500, ENST00000462712, NM_001031716, NR_045623, uc002usx.2, uc002usy.2, uc002usz.2_5end |
EntrezGene: | OBFC2A |
HGNC: | 26232 |
UniProt: | F8WAF5Q96AH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.96e-29 | 72 |
granulocyte monocyte progenitor cell | 1.45e-26 | 67 |
multi fate stem cell | 1.55e-26 | 427 |
defensive cell | 2.14e-26 | 48 |
phagocyte | 2.14e-26 | 48 |
macrophage dendritic cell progenitor | 2.28e-25 | 61 |
somatic stem cell | 7.86e-25 | 433 |
monopoietic cell | 3.63e-24 | 59 |
monocyte | 3.63e-24 | 59 |
monoblast | 3.63e-24 | 59 |
promonocyte | 3.63e-24 | 59 |
myeloid lineage restricted progenitor cell | 1.31e-23 | 66 |
classical monocyte | 3.53e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.53e-23 | 42 |
stem cell | 4.74e-22 | 441 |
mesenchymal cell | 5.04e-22 | 354 |
myeloid cell | 8.06e-22 | 108 |
common myeloid progenitor | 8.06e-22 | 108 |
leukocyte | 3.02e-21 | 136 |
connective tissue cell | 4.30e-21 | 361 |
hematopoietic oligopotent progenitor cell | 1.50e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.50e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 3.85e-17 | 120 |
hematopoietic stem cell | 3.38e-16 | 168 |
nongranular leukocyte | 8.10e-16 | 115 |
motile cell | 2.11e-15 | 386 |
hematopoietic cell | 6.95e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.16e-28 | 98 |
blood island | 2.16e-28 | 98 |
hemolymphoid system | 4.88e-27 | 108 |
bone marrow | 6.83e-25 | 76 |
immune system | 2.80e-23 | 93 |
musculoskeletal system | 7.45e-23 | 167 |
bone element | 1.47e-22 | 82 |
skeletal element | 3.55e-21 | 90 |
connective tissue | 5.89e-21 | 371 |
skeletal system | 1.24e-19 | 100 |
lateral plate mesoderm | 2.86e-16 | 203 |
mesoderm | 2.11e-15 | 315 |
mesoderm-derived structure | 2.11e-15 | 315 |
presumptive mesoderm | 2.11e-15 | 315 |