FFCP PHASE1:Hg19::chr2:192543153..192543170,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:192543153..192543170,+ to FFCP PHASE1:Hg19::chr2:192543153..192543170,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64859 | |EntrezGene=64859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26232 | |HGNC=26232 | ||
|TSSclassifier=strong | |||
|UniProt=Q96AH0 | |UniProt=Q96AH0 | ||
|association_with_transcript=-87bp_to_ENST00000425611_5end | |||
|cluster_id=chr2:192543153..192543170,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_OBFC2A_5end | |||
|id=chr2:192543153..192543170,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.06e-26!76;CL:0000003!1.32e-25!722;CL:0000048!8.77e-24!430;CL:0000557!3.32e-23!71;CL:0002057!1.46e-22!42;CL:0002009!1.57e-22!65;CL:0000548!1.81e-22!679;CL:0000004!1.81e-22!679;CL:0000255!1.81e-22!679;CL:0000723!1.92e-22!436;CL:0000012!1.33e-21!682;CL:0002194!2.48e-21!63;CL:0000576!2.48e-21!63;CL:0000040!2.48e-21!63;CL:0000559!2.48e-21!63;CL:0000144!3.10e-21!625;CL:0000134!5.24e-21!358;CL:0000839!9.09e-21!70;CL:0002371!2.81e-20!591;CL:0000738!3.89e-20!140;CL:0000763!1.59e-19!112;CL:0000049!1.59e-19!112;CL:0000034!1.99e-19!444;CL:0002320!3.35e-19!365;CL:0000860!3.51e-19!45;CL:0000063!1.48e-18!578;CL:0002032!1.81e-16!165;CL:0000837!1.81e-16!165;CL:0002031!3.57e-16!124;CL:0002087!2.70e-15!119;CL:0000037!4.41e-15!172;CL:0000566!4.41e-15!172;CL:0000219!5.77e-15!390;CL:0000988!3.77e-14!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.02e-18;33!CL:0002057;2.02e-18;33!CL:0000473;2.81e-18;39!CL:0000234;2.81e-18;39!CL:0000576;2.06e-13;48!CL:0000766;5.47e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.39e-29,72;CL:0000473,5.44e-26,48;CL:0000234,5.44e-26,48;CL:0000557,8.85e-26,67;CL:0002009,3.14e-25,61;CL:0000048,1.52e-24,427;CL:0002194,5.50e-24,59;CL:0000576,5.50e-24,59;CL:0000040,5.50e-24,59;CL:0000559,5.50e-24,59;CL:0000723,3.53e-23,433;CL:0000839,3.70e-23,66;CL:0000860,1.46e-22,42;CL:0002057,1.46e-22,42;CL:0000134,6.01e-22,354;CL:0000738,1.57e-21,136;CL:0000763,3.99e-21,108;CL:0000049,3.99e-21,108;CL:0000034,4.29e-20,441;CL:0002320,4.37e-20,361;CL:0002032,1.49e-17,161;CL:0000837,1.49e-17,161;CL:0002031,1.79e-17,120;CL:0002087,1.41e-16,115;CL:0000037,4.50e-16,168;CL:0000219,1.04e-15,386;CL:0000988,5.05e-15,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-16;42!CL:0000049;5.19e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-27!102;UBERON:0003061!1.17e-27!102;UBERON:0002193!1.08e-25!112;UBERON:0002371!2.10e-22!80;UBERON:0001474!9.05e-21!86;UBERON:0002204!2.07e-19!167;UBERON:0002384!1.63e-18!375;UBERON:0004765!4.02e-18!101;UBERON:0001434!4.02e-18!101;UBERON:0002405!3.41e-15!115;UBERON:0003081!1.34e-13!216;UBERON:0000926!2.50e-07!448;UBERON:0004120!2.50e-07!448;UBERON:0006603!2.50e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.13e-30,98;UBERON:0003061,7.13e-30,98;UBERON:0002193,1.21e-27,108;UBERON:0002371,1.10e-24,76;UBERON:0001474,8.03e-23,82;UBERON:0002405,1.68e-22,93;UBERON:0004765,8.97e-20,90;UBERON:0002384,2.23e-19,371;UBERON:0002204,3.12e-19,167;UBERON:0001434,2.93e-18,100;UBERON:0003081,5.66e-14,203;UBERON:0000926,2.90e-13,315;UBERON:0004120,2.90e-13,315;UBERON:0006603,2.90e-13,315 | |||
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| ||
|short_description=p2@OBFC2A | |||
}} | }} |
Latest revision as of 05:02, 19 September 2015
Short description: | p2@OBFC2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OBFC2A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -87bp_to_ENST00000425611_5end |
EntrezGene: | OBFC2A |
HGNC: | 26232 |
UniProt: | Q96AH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.39e-29 | 72 |
defensive cell | 5.44e-26 | 48 |
phagocyte | 5.44e-26 | 48 |
granulocyte monocyte progenitor cell | 8.85e-26 | 67 |
macrophage dendritic cell progenitor | 3.14e-25 | 61 |
multi fate stem cell | 1.52e-24 | 427 |
monopoietic cell | 5.50e-24 | 59 |
monocyte | 5.50e-24 | 59 |
monoblast | 5.50e-24 | 59 |
promonocyte | 5.50e-24 | 59 |
somatic stem cell | 3.53e-23 | 433 |
myeloid lineage restricted progenitor cell | 3.70e-23 | 66 |
classical monocyte | 1.46e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-22 | 42 |
mesenchymal cell | 6.01e-22 | 354 |
leukocyte | 1.57e-21 | 136 |
myeloid cell | 3.99e-21 | 108 |
common myeloid progenitor | 3.99e-21 | 108 |
stem cell | 4.29e-20 | 441 |
connective tissue cell | 4.37e-20 | 361 |
hematopoietic oligopotent progenitor cell | 1.49e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 1.79e-17 | 120 |
nongranular leukocyte | 1.41e-16 | 115 |
hematopoietic stem cell | 4.50e-16 | 168 |
motile cell | 1.04e-15 | 386 |
hematopoietic cell | 5.05e-15 | 177 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.13e-30 | 98 |
blood island | 7.13e-30 | 98 |
hemolymphoid system | 1.21e-27 | 108 |
bone marrow | 1.10e-24 | 76 |
bone element | 8.03e-23 | 82 |
immune system | 1.68e-22 | 93 |
skeletal element | 8.97e-20 | 90 |
connective tissue | 2.23e-19 | 371 |
musculoskeletal system | 3.12e-19 | 167 |
skeletal system | 2.93e-18 | 100 |
lateral plate mesoderm | 5.66e-14 | 203 |
mesoderm | 2.90e-13 | 315 |
mesoderm-derived structure | 2.90e-13 | 315 |
presumptive mesoderm | 2.90e-13 | 315 |