FFCP PHASE1:Hg19::chr3:10028471..10028552,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:10028471..10028552,-
|short_description=p1@TMEM111
|description=CAGE_peak_1_at_TMEM111_5end
|association_with_transcript=0bp_to_ENST00000487465,NM_018447,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55831 | |EntrezGene=55831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23999 | |HGNC=23999 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P0I2 | |UniProt=Q9P0I2 | ||
|association_with_transcript=0bp_to_ENST00000487465,NM_018447,uc003bun.2,uc003buo.2_5end | |||
|cluster_id=chr3:10028471..10028552,- | |||
|description=CAGE_peak_1_at_TMEM111_5end | |||
|id=chr3:10028471..10028552,- | |||
|ontology_enrichment_celltype=CL:0000048!1.21e-19!430;CL:0000723!7.31e-19!436;CL:0000034!1.18e-17!444;CL:0000766!3.19e-17!76;CL:0002009!8.07e-16!65;CL:0002194!2.16e-15!63;CL:0000576!2.16e-15!63;CL:0000040!2.16e-15!63;CL:0000559!2.16e-15!63;CL:0000839!1.20e-14!70;CL:0002320!6.89e-14!365;CL:0000557!9.38e-14!71;CL:0002057!2.33e-13!42;CL:0000134!3.17e-13!358;CL:0000860!1.59e-11!45;CL:0000763!1.65e-10!112;CL:0000049!1.65e-10!112;CL:0000219!1.47e-09!390;CL:0000738!9.52e-09!140;CL:0000144!1.14e-08!625;CL:0002371!1.26e-08!591;CL:0000003!7.56e-08!722;CL:0000136!8.79e-08!15;CL:0000359!6.63e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.69e-11;39!CL:0000234;2.69e-11;39!CL:0000860;1.38e-10;33!CL:0002057;1.38e-10;33!CL:0000136;3.57e-09;13!CL:0000576;3.59e-09;48!CL:0000766;5.87e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.15e-20,427;CL:0000723,7.33e-20,433;CL:0000766,4.11e-19,72;CL:0000034,1.29e-18,441;CL:0002009,8.13e-18,61;CL:0002194,2.14e-17,59;CL:0000576,2.14e-17,59;CL:0000040,2.14e-17,59;CL:0000559,2.14e-17,59;CL:0000839,2.00e-16,66;CL:0000473,2.44e-16,48;CL:0000234,2.44e-16,48;CL:0000557,1.98e-15,67;CL:0002320,1.05e-14,361;CL:0000134,5.03e-14,354;CL:0000860,2.33e-13,42;CL:0002057,2.33e-13,42;CL:0000763,1.70e-11,108;CL:0000049,1.70e-11,108;CL:0000219,3.36e-10,386;CL:0000738,1.71e-09,136;CL:0000136,8.79e-08,15;CL:0002031,4.50e-07,120;CL:0000359,6.63e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;4.77e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.09e-16!167;UBERON:0002371!5.44e-13!80;UBERON:0002390!2.08e-12!102;UBERON:0003061!2.08e-12!102;UBERON:0002384!2.26e-12!375;UBERON:0002193!2.05e-11!112;UBERON:0004765!2.18e-11!101;UBERON:0001434!2.18e-11!101;UBERON:0001474!5.28e-11!86;UBERON:0002405!1.38e-08!115;UBERON:0003081!1.39e-08!216;UBERON:0000926!3.64e-07!448;UBERON:0004120!3.64e-07!448;UBERON:0006603!3.64e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.90e-18,167;UBERON:0000926,3.25e-15,315;UBERON:0004120,3.25e-15,315;UBERON:0006603,3.25e-15,315;UBERON:0004765,1.17e-14,90;UBERON:0002371,1.86e-14,76;UBERON:0002390,1.35e-13,98;UBERON:0003061,1.35e-13,98;UBERON:0001434,1.92e-13,100;UBERON:0002384,3.97e-13,371;UBERON:0002193,1.84e-12,108;UBERON:0001474,3.13e-12,82;UBERON:0003081,9.52e-11,203;UBERON:0002405,2.49e-10,93 | |||
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|short_description=p1@TMEM111 | |||
}} | }} |
Latest revision as of 05:18, 19 September 2015
Short description: | p1@TMEM111 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM111_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000487465, NM_018447, uc003bun.2, uc003buo.2_5end |
EntrezGene: | TMEM111 |
HGNC: | 23999 |
UniProt: | Q9P0I2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.15e-20 | 427 |
somatic stem cell | 7.33e-20 | 433 |
myeloid leukocyte | 4.11e-19 | 72 |
stem cell | 1.29e-18 | 441 |
macrophage dendritic cell progenitor | 8.13e-18 | 61 |
monopoietic cell | 2.14e-17 | 59 |
monocyte | 2.14e-17 | 59 |
monoblast | 2.14e-17 | 59 |
promonocyte | 2.14e-17 | 59 |
myeloid lineage restricted progenitor cell | 2.00e-16 | 66 |
defensive cell | 2.44e-16 | 48 |
phagocyte | 2.44e-16 | 48 |
granulocyte monocyte progenitor cell | 1.98e-15 | 67 |
connective tissue cell | 1.05e-14 | 361 |
mesenchymal cell | 5.03e-14 | 354 |
classical monocyte | 2.33e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.33e-13 | 42 |
myeloid cell | 1.70e-11 | 108 |
common myeloid progenitor | 1.70e-11 | 108 |
motile cell | 3.36e-10 | 386 |
leukocyte | 1.71e-09 | 136 |
fat cell | 8.79e-08 | 15 |
hematopoietic lineage restricted progenitor cell | 4.50e-07 | 120 |
vascular associated smooth muscle cell | 6.63e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.90e-18 | 167 |
mesoderm | 3.25e-15 | 315 |
mesoderm-derived structure | 3.25e-15 | 315 |
presumptive mesoderm | 3.25e-15 | 315 |
skeletal element | 1.17e-14 | 90 |
bone marrow | 1.86e-14 | 76 |
hematopoietic system | 1.35e-13 | 98 |
blood island | 1.35e-13 | 98 |
skeletal system | 1.92e-13 | 100 |
connective tissue | 3.97e-13 | 371 |
hemolymphoid system | 1.84e-12 | 108 |
bone element | 3.13e-12 | 82 |
lateral plate mesoderm | 9.52e-11 | 203 |
immune system | 2.49e-10 | 93 |