FFCP PHASE1:Hg19::chr6:5133083..5133094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57128 | |EntrezGene=57128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21365 | |HGNC=21365 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000458438_5end | |association_with_transcript=33bp_to_ENST00000458438_5end | ||
|cluster_id=chr6:5133083..5133094,- | |||
|description=CAGE_peak_9_at_LYRM4_5end | |description=CAGE_peak_9_at_LYRM4_5end | ||
|id=chr6:5133083..5133094,- | |id=chr6:5133083..5133094,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002188;3.10e-11;5!CL:1000746;2.11e-08;7!CL:1000612;2.11e-08;7 | |ontology_enrichment_celltype_v019=CL:0002188;3.10e-11;5!CL:1000746;2.11e-08;7!CL:1000612;2.11e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002188,3.60e-11,5;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.11e-08;7 | |ontology_enrichment_development_v019=UBERON:0004872;2.11e-08;7 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.69e-10!115 | |ontology_enrichment_uberon=UBERON:0007023!7.69e-10!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.69e-18;3!UBERON:0004177;3.10e-11;5!UBERON:0005057;3.10e-11;5!UBERON:0000074;2.11e-08;7!UBERON:0001229;2.11e-08;7!UBERON:0002417;3.83e-07;58!UBERON:0000916;3.83e-07;58!UBERON:0005172;8.04e-07;52!UBERON:0005173;8.04e-07;52!UBERON:0001155;8.14e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002106;8.69e-18;3!UBERON:0004177;3.10e-11;5!UBERON:0005057;3.10e-11;5!UBERON:0000074;2.11e-08;7!UBERON:0001229;2.11e-08;7!UBERON:0002417;3.83e-07;58!UBERON:0000916;3.83e-07;58!UBERON:0005172;8.04e-07;52!UBERON:0005173;8.04e-07;52!UBERON:0001155;8.14e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.00e-18,3;UBERON:0004854,8.00e-18,3;UBERON:0009034,8.00e-18,3;UBERON:0002095,8.00e-18,3;UBERON:0004782,8.00e-18,3;UBERON:0003281,8.00e-18,3;UBERON:0009664,8.00e-18,3;UBERON:0002296,8.00e-18,3;UBERON:0005602,8.00e-18,3;UBERON:0001179,8.00e-18,3;UBERON:0006293,8.00e-18,3;UBERON:0003887,1.71e-17,12;UBERON:0005172,3.93e-09,54;UBERON:0005173,3.93e-09,54;UBERON:0005409,1.03e-08,25;UBERON:0004177,2.03e-08,7;UBERON:0005057,2.03e-08,7;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0002417,2.64e-08,60;UBERON:0000916,2.64e-08,60;UBERON:0000945,1.59e-07,8;UBERON:0010039,1.59e-07,8;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0001155,7.48e-07,9;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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| ||
|short_description=p9@LYRM4 | |short_description=p9@LYRM4 | ||
}} | }} |
Latest revision as of 05:38, 19 September 2015
Short description: | p9@LYRM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LYRM4_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000458438_5end |
EntrezGene: | LYRM4 |
HGNC: | 21365 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 3.60e-11 | 5 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |