FFCP PHASE1:Hg19::chr15:79290607..79290619,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5923 | |EntrezGene=5923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9875 | |HGNC=9875 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560943_5end | |association_with_transcript=0bp_to_ENST00000560943_5end | ||
|cluster_id=chr15:79290607..79290619,- | |||
|description=CAGE_peak_7_at_RASGRF1_5end | |description=CAGE_peak_7_at_RASGRF1_5end | ||
|id=chr15:79290607..79290619,- | |id=chr15:79290607..79290619,- | ||
|ontology_enrichment_celltype=CL:0005020!1.17e-08!6;CL:0002138!1.17e-08!6;CL:0005022!1.17e-08!6;CL:0000840!4.08e-08!5;CL:0001029!4.08e-08!5 | |ontology_enrichment_celltype=CL:0005020!1.17e-08!6;CL:0002138!1.17e-08!6;CL:0005022!1.17e-08!6;CL:0000840!4.08e-08!5;CL:0001029!4.08e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000322;6.14e-07;3!CL:0002178;6.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.14e-07,3;CL:0002178,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.31e-09;29!UBERON:0001041;2.68e-09;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3910;8.69e-10;2!DOID:3493;1.03e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,8.69e-10,2;DOID:3493,1.03e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0006331!1.08e-08!3 | |ontology_enrichment_uberon=UBERON:0006331!1.08e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.66e-18;1!UBERON:0006518;2.66e-18;1!UBERON:0008949;2.66e-18;1!UBERON:0000101;2.66e-18;1!UBERON:0002167;2.66e-18;1!UBERON:0002048;1.43e-12;22!UBERON:0000117;1.43e-12;22!UBERON:0000171;1.43e-12;22!UBERON:0000170;1.43e-12;22!UBERON:0004903;8.69e-10;2!UBERON:0002173;8.69e-10;2!UBERON:0002186;8.69e-10;2!UBERON:0005178;1.84e-07;34!UBERON:0002224;1.84e-07;34!UBERON:0004821;6.14e-07;3!UBERON:0007499;6.14e-07;3!UBERON:0003215;6.14e-07;3!UBERON:0010368;6.14e-07;3!UBERON:0009911;6.14e-07;3!UBERON:0002299;6.14e-07;3!UBERON:0006524;6.14e-07;3!UBERON:0008874;6.14e-07;3!UBERON:0002169;6.14e-07;3!UBERON:0004894;6.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,2.66e-18,1;UBERON:0006518,2.66e-18,1;UBERON:0008949,2.66e-18,1;UBERON:0000101,2.66e-18,1;UBERON:0002167,2.66e-18,1;UBERON:0002048,1.43e-12,22;UBERON:0000117,1.43e-12,22;UBERON:0000171,1.43e-12,22;UBERON:0000170,1.43e-12,22;UBERON:0005597,1.43e-12,22;UBERON:0000118,1.43e-12,22;UBERON:0004903,8.69e-10,2;UBERON:0002173,8.69e-10,2;UBERON:0002186,8.69e-10,2;UBERON:0005178,3.11e-08,34;UBERON:0002224,3.11e-08,34;UBERON:0005181,5.26e-08,35;UBERON:0005153,1.38e-07,37;UBERON:0008947,2.16e-07,38;UBERON:0003258,2.16e-07,38;UBERON:0004821,6.14e-07,3;UBERON:0003215,6.14e-07,3;UBERON:0010368,6.14e-07,3;UBERON:0009911,6.14e-07,3;UBERON:0002299,6.14e-07,3;UBERON:0006524,6.14e-07,3;UBERON:0008874,6.14e-07,3;UBERON:0002169,6.14e-07,3;UBERON:0004894,6.14e-07,3 | |||
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| ||
|short_description=p7@RASGRF1 | |short_description=p7@RASGRF1 | ||
}} | }} |
Latest revision as of 07:47, 19 September 2015
Short description: | p7@RASGRF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RASGRF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000560943_5end |
EntrezGene: | RASGRF1 |
HGNC: | 9875 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.14e-07 | 3 |
epithelial cell of stomach | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 2.66e-18 | 1 |
right lung lobe | 2.66e-18 | 1 |
lower lobe of lung | 2.66e-18 | 1 |
lobe of lung | 2.66e-18 | 1 |
right lung | 2.66e-18 | 1 |
lung | 1.43e-12 | 22 |
respiratory tube | 1.43e-12 | 22 |
respiration organ | 1.43e-12 | 22 |
pair of lungs | 1.43e-12 | 22 |
lung primordium | 1.43e-12 | 22 |
lung bud | 1.43e-12 | 22 |
bronchoalveolar duct junction | 8.69e-10 | 2 |
alveolar duct | 8.69e-10 | 2 |
bronchiole | 8.69e-10 | 2 |
thoracic cavity element | 3.11e-08 | 34 |
thoracic cavity | 3.11e-08 | 34 |
thoracic segment organ | 5.26e-08 | 35 |
epithelial bud | 1.38e-07 | 37 |
respiratory primordium | 2.16e-07 | 38 |
endoderm of foregut | 2.16e-07 | 38 |
pulmonary alveolus epithelium | 6.14e-07 | 3 |
alveolus | 6.14e-07 | 3 |
pulmonary lobule | 6.14e-07 | 3 |
lobule | 6.14e-07 | 3 |
alveolus of lung | 6.14e-07 | 3 |
alveolar system | 6.14e-07 | 3 |
pulmonary acinus | 6.14e-07 | 3 |
alveolar sac | 6.14e-07 | 3 |
alveolar wall | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 8.69e-10 | 2 |
signet ring cell adenocarcinoma | 1.03e-09 | 2 |