FFCP PHASE1:Hg19::chr17:27229915..27229940,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147015 | |EntrezGene=147015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28326 | |HGNC=28326 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_uc002hdd.3_5end | |association_with_transcript=34bp_to_uc002hdd.3_5end | ||
|cluster_id=chr17:27229915..27229940,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_5_at_DHRS13_5end | |description=CAGE_peak_5_at_DHRS13_5end | ||
|id=chr17:27229915..27229940,- | |id=chr17:27229915..27229940,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;4.49e-30;2!CL:0000558;4.49e-30;2!CL:0000775;6.20e-20;3!CL:0002032;2.06e-15;1!CL:0000557;2.06e-15;1!CL:0000094;4.58e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.49e-30,2;CL:0000765,4.49e-30,2;CL:0000050,4.49e-30,2;CL:0000038,4.49e-30,2;CL:0000558,4.49e-30,2;CL:0000547,4.49e-30,2;CL:0000549,4.49e-30,2;CL:0000550,4.49e-30,2;CL:0000552,4.49e-30,2;CL:0000775,5.37e-20,3;CL:0000094,4.34e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.06e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!1.42e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.06e-15;1!UBERON:0001785;2.06e-15;1!UBERON:0002464;2.06e-15;1!UBERON:0004904;2.06e-15;1!UBERON:0001021;2.06e-15;1!UBERON:0002107;2.64e-12;19!UBERON:0006925;2.64e-12;19!UBERON:0002423;2.05e-09;25!UBERON:0003714;2.31e-08;2!UBERON:0005162;2.31e-08;2!UBERON:0000122;2.31e-08;2!UBERON:0002365;1.40e-07;31!UBERON:0002330;1.40e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-15,1;UBERON:0001785,1.78e-15,1;UBERON:0002464,1.78e-15,1;UBERON:0004904,1.78e-15,1;UBERON:0001021,1.78e-15,1;UBERON:0003902,1.78e-15,1;UBERON:0005425,1.78e-15,1;UBERON:0002107,2.76e-12,19;UBERON:0006925,2.76e-12,19;UBERON:0008836,2.76e-12,19;UBERON:0008835,1.20e-10,22;UBERON:0003894,1.20e-10,22;UBERON:0009854,3.39e-10,23;UBERON:0007499,2.12e-09,25;UBERON:0009497,2.12e-09,25;UBERON:0000015,2.12e-09,25;UBERON:0002423,2.12e-09,25;UBERON:0006235,2.12e-09,25;UBERON:0004161,2.12e-09,25;UBERON:0009856,4.77e-09,26;UBERON:0003714,2.15e-08,2;UBERON:0005162,2.15e-08,2;UBERON:0000122,2.15e-08,2;UBERON:0002365,1.27e-07,31;UBERON:0002330,1.27e-07,31;UBERON:0002368,8.94e-07,35 | |||
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| ||
|short_description=p5@DHRS13 | |short_description=p5@DHRS13 | ||
}} | }} |
Latest revision as of 07:48, 19 September 2015
Short description: | p5@DHRS13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DHRS13_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 34bp_to_uc002hdd.3_5end |
EntrezGene: | DHRS13 |
HGNC: | 28326 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.49e-30 | 2 |
erythroblast | 4.49e-30 | 2 |
megakaryocyte-erythroid progenitor cell | 4.49e-30 | 2 |
erythroid progenitor cell | 4.49e-30 | 2 |
reticulocyte | 4.49e-30 | 2 |
proerythroblast | 4.49e-30 | 2 |
basophilic erythroblast | 4.49e-30 | 2 |
polychromatophilic erythroblast | 4.49e-30 | 2 |
orthochromatic erythroblast | 4.49e-30 | 2 |
neutrophil | 5.37e-20 | 3 |
granulocyte | 4.34e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-15 | 1 |
cranial nerve | 1.78e-15 | 1 |
nerve trunk | 1.78e-15 | 1 |
nerve connecting eye with brain | 1.78e-15 | 1 |
nerve | 1.78e-15 | 1 |
retinal neural layer | 1.78e-15 | 1 |
presumptive neural retina | 1.78e-15 | 1 |
liver | 2.76e-12 | 19 |
digestive gland | 2.76e-12 | 19 |
liver bud | 2.76e-12 | 19 |
hepatic diverticulum | 1.20e-10 | 22 |
liver primordium | 1.20e-10 | 22 |
digestive tract diverticulum | 3.39e-10 | 23 |
epithelial sac | 2.12e-09 | 25 |
epithelium of foregut-midgut junction | 2.12e-09 | 25 |
anatomical boundary | 2.12e-09 | 25 |
hepatobiliary system | 2.12e-09 | 25 |
foregut-midgut junction | 2.12e-09 | 25 |
septum transversum | 2.12e-09 | 25 |
sac | 4.77e-09 | 26 |
neural tissue | 2.15e-08 | 2 |
multi cell component structure | 2.15e-08 | 2 |
neuron projection bundle | 2.15e-08 | 2 |
exocrine gland | 1.27e-07 | 31 |
exocrine system | 1.27e-07 | 31 |
endocrine gland | 8.94e-07 | 35 |