FFCP PHASE1:Hg19::chr17:27277455..27277467,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:27277455..27277467,- to FFCP PHASE1:Hg19::chr17:27277455..27277467,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57649 | |EntrezGene=57649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20816 | |HGNC=20816 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-166bp_to_uc010wbb.1_5end | |||
|cluster_id=chr17:27277455..27277467,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_PHF12_5end | |||
|id=chr17:27277455..27277467,- | |||
|ontology_enrichment_celltype=CL:0000766!2.61e-17!76;CL:0000763!3.42e-16!112;CL:0000049!3.42e-16!112;CL:0000738!5.08e-16!140;CL:0000988!7.52e-16!182;CL:0000037!2.38e-15!172;CL:0000566!2.38e-15!172;CL:0002032!6.82e-14!165;CL:0000837!6.82e-14!165;CL:0000557!7.75e-13!71;CL:0000839!1.13e-12!70;CL:0002194!9.33e-12!63;CL:0000576!9.33e-12!63;CL:0000040!9.33e-12!63;CL:0000559!9.33e-12!63;CL:0002009!1.91e-11!65;CL:0002087!4.19e-10!119;CL:0002057!4.45e-10!42;CL:0002031!4.65e-10!124;CL:0000860!3.87e-09!45;CL:0000094!2.01e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.34e-21;8!CL:0000081;3.09e-15;11!CL:0000775;2.04e-09;3!CL:0000767;9.84e-09;3!CL:0000784;2.00e-08;3!CL:0000226;4.95e-08;3!CL:0000623;4.95e-08;3!CL:0000842;4.95e-08;3!CL:0000771;7.64e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.61e-23,136;CL:0000094,7.47e-22,8;CL:0000037,8.98e-20,168;CL:0000988,3.77e-18,177;CL:0000766,5.64e-18,72;CL:0000081,2.04e-15,11;CL:0002032,2.23e-15,161;CL:0000837,2.23e-15,161;CL:0002087,3.33e-13,115;CL:0000763,9.48e-13,108;CL:0000049,9.48e-13,108;CL:0002031,2.42e-10,120;CL:0000775,2.07e-09,3;CL:0000860,2.69e-09,42;CL:0002057,2.69e-09,42;CL:0000557,4.57e-09,67;CL:0000767,5.37e-09,3;CL:0000784,1.23e-08,3;CL:0002194,1.53e-08,59;CL:0000576,1.53e-08,59;CL:0000040,1.53e-08,59;CL:0000559,1.53e-08,59;CL:0000623,1.84e-08,3;CL:0000825,1.84e-08,3;CL:0000226,3.11e-08,3;CL:0000842,3.11e-08,3;CL:0000839,3.17e-08,66;CL:0002009,3.95e-08,61;CL:0000473,1.05e-07,48;CL:0000234,1.05e-07,48;CL:0000771,7.73e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.98e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.19e-19!102;UBERON:0003061!3.19e-19!102;UBERON:0002193!2.05e-18!112;UBERON:0002371!1.58e-11!80;UBERON:0001474!4.04e-11!86;UBERON:0000178!2.72e-09!15;UBERON:0000179!2.72e-09!15;UBERON:0000463!2.72e-09!15;UBERON:0002405!9.65e-09!115;UBERON:0004765!2.97e-08!101;UBERON:0001434!2.97e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.09e-22;15!UBERON:0000179;9.09e-22;15!UBERON:0000463;9.09e-22;15!UBERON:0002390;2.70e-13;32!UBERON:0002193;8.51e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.38e-22,15;UBERON:0000179,3.38e-22,15;UBERON:0000463,3.38e-22,15;UBERON:0002390,2.10e-19,98;UBERON:0003061,2.10e-19,98;UBERON:0002193,8.83e-17,108;UBERON:0003081,6.30e-10,203;UBERON:0002371,2.10e-08,76;UBERON:0001474,1.92e-07,82;UBERON:0002405,9.81e-07,93 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.247532705920093,0.994192127183747,0.672325146451775,0.602694528023977,0,0,0.61560529038394,0.408001382488506,0.626909442956176,0.286235987131057,0.273748850145768,0,0.152826811495903,0,0.0787107813136792,7.08055698328027,1.91914699048606,5.26374819274658,0,0,0,0,0.142169232487422,0,1.10799081706375,1.40381113229099,2.38711957787437,0.895661896959697,0.32389366601898,0.515151135268373,1.30858414901608,0.755751887377619,1.69808842831471,1.16214518452842,0.411167888021826,0.309706370895104,0.863077176966451,0,0.47296445977717,0.689491361473237,2.5819387343353,4.06279459783025,0.941211697713023,0.272906150057846,0,0.306083892370903,0.962787081228281,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,1.25624332628372,0.521482918420201,1.08594422352558,0.605399502633369,0.368277635987565,0.316462387440884,0.633765858935825,0.850417199860174,0.628975936525128,1.23561494261145,1.50176892841506,2.25015821375912,0.570025487482497,1.19350006319454,1.0959849225878,0,0,1.77901850772711,0,0,0,1.32208974556972,0.954053754535364,0,0,0.382273228125229,3.96513985737078,1.12101712596307,0.526768169550154,1.180258620683,3.93010762749165,2.05601498999509,0.334372990781356,0.651844533267181,0,0,0.445641827540694,0.294605907474837,0.664601683750863,0.270803863765016,0.384273959177026,0.520237390239513,0.493313713811028,0,0,0.889719378972363,1.07016331235885,0,0.339928028092699,0.383220493601921,1.03088233644789,0.506039384039006,0,0,0,0.451725357233318,0.255973222308837,0,0.473554504088034,0,2.41928091869679,2.13952156626806,2.89648807765598,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.283604451492204,0,0,0.130979075497713,0,0,1.62273696827342,2.08955684759121,0.797747763113191,1.43094374583205,2.85997455390064,2.60020250930695,0,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,26.3560834872127,38.7780264148325,0,0.496971951695318,0.12663051166458,1.19168262731897,0.860509862246441,0,0,0,0,0,0,0,0.454072282934794,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0.600182192168805,0.412210116953756,0.772921620136887,0.18611685633159,0.337552664482532,0.68205903612839,0.757301322732344,0.184099797284599,0.323292113637624,0.710019185033229,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0.365921118388786,0.795178609928912,0,0.725627385107593,0,0,1.56449532329816,0.643240938192885,0,0,0.721879481669586,0,0.505754070234305,0.241011029883482,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.704387472105808,0.829312462163088,1.58531948758658,0.50496973370552,0,0.763976851116555,0,0,0,0.300343057843917,0.571652865261156,0.224262168690721,0,0.07333828582095,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,2.1673383622212,1.94064817373566,1.66845947163673,1.52456774533478,1.30139853857622,0.773288812777695,0.837581326671744,0,21.7212036944683,44.8742188806037,24.4505152927261,0.24538298343828,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.553107505625109,0,0.587403472388222,0.686286847621712,1.6541442089831,1.50999940573032,2.02782359826544,0,0,0.30239029332968,0.248107807818777,0.460385919864187,0,0.128139149255701,0,0.160853921143607,0,0,0.532685175939381,0.164254312027618,0,0.232420756919918,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.262248829918848,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0.219259876645935,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0.429680979473094,0.290033387828457,0,0,0,0,0.127612712494584,0,0,0.31481234683064,1.3940745403212,0.308033580176089,2.66153015158511,0.869932992075073,0.37064843820784,0.143124886741991,0.372158369359667,0,0.762520775695299,0,0,0,0,1.07923474549989,0.274537029736055,0.235624804691373,0.808729926293264,0,0,0,0.731140468893853,1.05650146756755,0.136499911407986,0.424216295861138,0,0,0,0,0,0.655894752046633,0.202910376962704,0.92947049429925,0,0.717056761020258,0.196498082026242,0.35667105148125,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,1.01489521846434,3.82318603571188,2.27858874869665,1.66762242820452,2.46817363851717,1.94541993357815,1.62009431171434,2.37937552888281,0.427296284509893,0,0,0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| ||
|short_description=p4@PHF12 | |||
}} | }} |
Latest revision as of 07:50, 19 September 2015
Short description: | p4@PHF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PHF12_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -166bp_to_uc010wbb.1_5end |
EntrezGene: | PHF12 |
HGNC: | 20816 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.61e-23 | 136 |
granulocyte | 7.47e-22 | 8 |
hematopoietic stem cell | 8.98e-20 | 168 |
hematopoietic cell | 3.77e-18 | 177 |
myeloid leukocyte | 5.64e-18 | 72 |
blood cell | 2.04e-15 | 11 |
hematopoietic oligopotent progenitor cell | 2.23e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.23e-15 | 161 |
nongranular leukocyte | 3.33e-13 | 115 |
myeloid cell | 9.48e-13 | 108 |
common myeloid progenitor | 9.48e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 2.42e-10 | 120 |
neutrophil | 2.07e-09 | 3 |
classical monocyte | 2.69e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.69e-09 | 42 |
granulocyte monocyte progenitor cell | 4.57e-09 | 67 |
basophil | 5.37e-09 | 3 |
plasmacytoid dendritic cell | 1.23e-08 | 3 |
monopoietic cell | 1.53e-08 | 59 |
monocyte | 1.53e-08 | 59 |
monoblast | 1.53e-08 | 59 |
promonocyte | 1.53e-08 | 59 |
natural killer cell | 1.84e-08 | 3 |
pro-NK cell | 1.84e-08 | 3 |
single nucleate cell | 3.11e-08 | 3 |
mononuclear cell | 3.11e-08 | 3 |
myeloid lineage restricted progenitor cell | 3.17e-08 | 66 |
macrophage dendritic cell progenitor | 3.95e-08 | 61 |
defensive cell | 1.05e-07 | 48 |
phagocyte | 1.05e-07 | 48 |
eosinophil | 7.73e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.38e-22 | 15 |
haemolymphatic fluid | 3.38e-22 | 15 |
organism substance | 3.38e-22 | 15 |
hematopoietic system | 2.10e-19 | 98 |
blood island | 2.10e-19 | 98 |
hemolymphoid system | 8.83e-17 | 108 |
lateral plate mesoderm | 6.30e-10 | 203 |
bone marrow | 2.10e-08 | 76 |
bone element | 1.92e-07 | 82 |
immune system | 9.81e-07 | 93 |