FFCP PHASE1:Hg19::chr17:27309382..27309393,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:27309382..27309393,-
|short_description=p5@SEZ6
|description=CAGE_peak_5_at_SEZ6_5end
|association_with_transcript=-325bp_to_uc002hdm.2_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124925 | |EntrezGene=124925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15955 | |HGNC=15955 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-325bp_to_uc002hdm.2_5end | |||
|cluster_id=chr17:27309382..27309393,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_SEZ6_5end | |||
|id=chr17:27309382..27309393,- | |||
|ontology_enrichment_celltype=CL:0002057!1.32e-101!42;CL:0000860!3.57e-94!45;CL:0000766!1.19e-74!76;CL:0002194!2.73e-63!63;CL:0000576!2.73e-63!63;CL:0000040!2.73e-63!63;CL:0000559!2.73e-63!63;CL:0002009!4.49e-61!65;CL:0000738!1.63e-59!140;CL:0000839!3.15e-59!70;CL:0000557!2.89e-58!71;CL:0002087!1.30e-52!119;CL:0000763!1.09e-49!112;CL:0000049!1.09e-49!112;CL:0000037!3.59e-48!172;CL:0000566!3.59e-48!172;CL:0002031!1.42e-47!124;CL:0002032!1.59e-46!165;CL:0000837!1.59e-46!165;CL:0000988!7.36e-45!182;CL:0000134!9.99e-17!358;CL:0002320!3.63e-16!365;CL:0000094!8.47e-15!8;CL:0000219!3.44e-14!390;CL:0000048!7.93e-12!430;CL:0000034!8.28e-12!444;CL:0000723!1.72e-11!436;CL:0000767!1.34e-10!3;CL:0000081!1.46e-10!11;CL:0000623!7.12e-10!3;CL:0000825!7.12e-10!3;CL:0002393!2.09e-08!9;CL:0002397!2.09e-08!9;CL:0000063!3.49e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-111;33!CL:0002057;1.44e-111;33!CL:0000473;3.59e-79;39!CL:0000234;3.59e-79;39!CL:0000576;4.00e-52;48!CL:0000766;7.18e-37;69!CL:0000763;5.36e-18;100!CL:0002087;1.29e-14;104!CL:0000738;6.37e-11;136!CL:0000094;2.09e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.00e-98,42;CL:0002057,2.00e-98,42;CL:0000473,1.33e-85,48;CL:0000234,1.33e-85,48;CL:0000766,8.73e-70,72;CL:0002194,1.22e-67,59;CL:0000576,1.22e-67,59;CL:0000040,1.22e-67,59;CL:0000559,1.22e-67,59;CL:0002009,2.54e-65,61;CL:0000839,3.95e-60,66;CL:0000557,3.49e-59,67;CL:0000763,2.79e-45,108;CL:0000049,2.79e-45,108;CL:0000738,6.54e-38,136;CL:0002087,8.19e-36,115;CL:0002031,2.32e-31,120;CL:0000037,7.17e-30,168;CL:0002032,5.50e-29,161;CL:0000837,5.50e-29,161;CL:0000988,3.96e-28,177;CL:0000134,9.75e-12,354;CL:0002320,2.04e-11,361;CL:0000219,2.78e-10,386;CL:0000048,6.83e-09,427;CL:0000723,1.06e-08,433;CL:0000034,1.88e-08,441;CL:0000094,2.04e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.84e-74;42!CL:0000049;2.45e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-50!80;UBERON:0001474!1.70e-46!86;UBERON:0002390!2.37e-42!102;UBERON:0003061!2.37e-42!102;UBERON:0004765!3.40e-38!101;UBERON:0001434!3.40e-38!101;UBERON:0002193!1.09e-37!112;UBERON:0002405!2.17e-32!115;UBERON:0002204!2.41e-19!167;UBERON:0002384!2.11e-15!375;UBERON:0003081!8.64e-15!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.12e-52,76;UBERON:0001474,1.03e-47,82;UBERON:0004765,3.87e-43,90;UBERON:0002390,1.01e-42,98;UBERON:0003061,1.01e-42,98;UBERON:0002405,1.27e-41,93;UBERON:0001434,1.94e-38,100;UBERON:0002193,2.13e-38,108;UBERON:0002204,2.42e-21,167;UBERON:0003081,2.07e-18,203;UBERON:0002384,5.61e-11,371;UBERON:0000926,3.19e-10,315;UBERON:0004120,3.19e-10,315;UBERON:0006603,3.19e-10,315 | |||
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| ||
|short_description=p5@SEZ6 | |||
}} | }} |
Latest revision as of 07:58, 19 September 2015
Short description: | p5@SEZ6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SEZ6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -325bp_to_uc002hdm.2_5end |
EntrezGene: | SEZ6 |
HGNC: | 15955 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.00e-98 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-98 | 42 |
defensive cell | 1.33e-85 | 48 |
phagocyte | 1.33e-85 | 48 |
myeloid leukocyte | 8.73e-70 | 72 |
monopoietic cell | 1.22e-67 | 59 |
monocyte | 1.22e-67 | 59 |
monoblast | 1.22e-67 | 59 |
promonocyte | 1.22e-67 | 59 |
macrophage dendritic cell progenitor | 2.54e-65 | 61 |
myeloid lineage restricted progenitor cell | 3.95e-60 | 66 |
granulocyte monocyte progenitor cell | 3.49e-59 | 67 |
myeloid cell | 2.79e-45 | 108 |
common myeloid progenitor | 2.79e-45 | 108 |
leukocyte | 6.54e-38 | 136 |
nongranular leukocyte | 8.19e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 2.32e-31 | 120 |
hematopoietic stem cell | 7.17e-30 | 168 |
hematopoietic oligopotent progenitor cell | 5.50e-29 | 161 |
hematopoietic multipotent progenitor cell | 5.50e-29 | 161 |
hematopoietic cell | 3.96e-28 | 177 |
mesenchymal cell | 9.75e-12 | 354 |
connective tissue cell | 2.04e-11 | 361 |
motile cell | 2.78e-10 | 386 |
multi fate stem cell | 6.83e-09 | 427 |
somatic stem cell | 1.06e-08 | 433 |
stem cell | 1.88e-08 | 441 |
granulocyte | 2.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.12e-52 | 76 |
bone element | 1.03e-47 | 82 |
skeletal element | 3.87e-43 | 90 |
hematopoietic system | 1.01e-42 | 98 |
blood island | 1.01e-42 | 98 |
immune system | 1.27e-41 | 93 |
skeletal system | 1.94e-38 | 100 |
hemolymphoid system | 2.13e-38 | 108 |
musculoskeletal system | 2.42e-21 | 167 |
lateral plate mesoderm | 2.07e-18 | 203 |
connective tissue | 5.61e-11 | 371 |
mesoderm | 3.19e-10 | 315 |
mesoderm-derived structure | 3.19e-10 | 315 |
presumptive mesoderm | 3.19e-10 | 315 |