FFCP PHASE1:Hg19::chr19:50180485..50180501,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3276 | |EntrezGene=3276 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5187 | |HGNC=5187 | ||
|TSSclassifier=strong | |||
|UniProt=B4DJ87,Q99873 | |UniProt=B4DJ87,Q99873 | ||
|association_with_transcript=0bp_to_ENST00000449059,uc002ppd.2,uc002ppe.2,uc002ppf.2,uc002ppg.2,uc010enf.1_5end | |association_with_transcript=0bp_to_ENST00000449059,uc002ppd.2,uc002ppe.2,uc002ppf.2,uc002ppg.2,uc010enf.1_5end | ||
|cluster_id=chr19:50180485..50180501,+ | |||
|description=CAGE_peak_2_at_PRMT1_5end | |description=CAGE_peak_2_at_PRMT1_5end | ||
|id=chr19:50180485..50180501,+ | |id=chr19:50180485..50180501,+ | ||
|ontology_enrichment_celltype=CL:0002321!4.33e-19!248;CL:0000220!2.10e-18!246;CL:0000548!6.22e-17!679;CL:0000004!6.22e-17!679;CL:0000255!6.22e-17!679;CL:0000012!1.11e-16!682;CL:0000066!7.16e-14!254;CL:0000144!2.74e-11!625;CL:0000222!5.56e-11!119;CL:0000393!5.07e-10!60;CL:0000211!5.07e-10!60;CL:0000003!8.89e-10!722;CL:0000183!1.22e-09!59;CL:0002371!3.92e-09!591;CL:0000055!4.41e-09!180;CL:0000187!4.03e-08!54;CL:0000680!4.55e-08!57;CL:0000056!4.55e-08!57;CL:0000355!4.55e-08!57;CL:0000192!1.46e-07!42;CL:0000514!1.46e-07!42;CL:0000359!3.51e-07!32;CL:1000449!3.72e-07!16;CL:0000115!6.12e-07!35;CL:0002078!7.70e-07!44;CL:0000221!7.92e-07!71 | |ontology_enrichment_celltype=CL:0002321!4.33e-19!248;CL:0000220!2.10e-18!246;CL:0000548!6.22e-17!679;CL:0000004!6.22e-17!679;CL:0000255!6.22e-17!679;CL:0000012!1.11e-16!682;CL:0000066!7.16e-14!254;CL:0000144!2.74e-11!625;CL:0000222!5.56e-11!119;CL:0000393!5.07e-10!60;CL:0000211!5.07e-10!60;CL:0000003!8.89e-10!722;CL:0000183!1.22e-09!59;CL:0002371!3.92e-09!591;CL:0000055!4.41e-09!180;CL:0000187!4.03e-08!54;CL:0000680!4.55e-08!57;CL:0000056!4.55e-08!57;CL:0000355!4.55e-08!57;CL:0000192!1.46e-07!42;CL:0000514!1.46e-07!42;CL:0000359!3.51e-07!32;CL:1000449!3.72e-07!16;CL:0000115!6.12e-07!35;CL:0002078!7.70e-07!44;CL:0000221!7.92e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:1000449;7.40e-08;15!CL:0002681;4.99e-07;12!CL:0002584;4.99e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.01e-19,250;CL:0000066,7.86e-14,253;CL:0000222,2.57e-11,121;CL:0000393,5.16e-10,61;CL:0000211,5.16e-10,61;CL:0000187,4.05e-08,55;CL:0000680,4.53e-08,58;CL:0000056,4.53e-08,58;CL:0000355,4.53e-08,58;CL:0000192,1.52e-07,43;CL:0000514,1.52e-07,43;CL:1000449,1.90e-07,15;CL:0000115,2.79e-07,36;CL:0000359,2.96e-07,32;CL:0002078,3.68e-07,45;CL:0002681,9.69e-07,12;CL:0002584,9.69e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.67e-13!118;UBERON:0000119!6.99e-13!312;UBERON:0000483!1.13e-12!309;UBERON:0005256!1.96e-12!143;UBERON:0000914!5.35e-11!83;UBERON:0002329!5.35e-11!83;UBERON:0003077!5.35e-11!83;UBERON:0003059!5.35e-11!83;UBERON:0007282!5.35e-11!83;UBERON:0009618!5.35e-11!83;UBERON:0007285!5.35e-11!83;UBERON:0004290!6.27e-11!70;UBERON:0003104!6.75e-11!238;UBERON:0009142!6.75e-11!238;UBERON:0000490!7.22e-11!138;UBERON:0000486!8.57e-11!82;UBERON:0002049!9.65e-11!79;UBERON:0007798!9.65e-11!79;UBERON:0000055!2.53e-10!69;UBERON:0004872!5.94e-10!84;UBERON:0002100!6.08e-10!216;UBERON:0000481!1.55e-09!347;UBERON:0001981!3.89e-09!60;UBERON:0007500!3.89e-09!60;UBERON:0004537!3.89e-09!60;UBERON:0006965!3.89e-09!60;UBERON:0001134!1.01e-08!61;UBERON:0002036!1.01e-08!61;UBERON:0003082!1.01e-08!61;UBERON:0001637!1.90e-08!42;UBERON:0003509!1.90e-08!42;UBERON:0004572!1.90e-08!42;UBERON:0002385!8.89e-08!63;UBERON:0001015!8.89e-08!63;UBERON:0000383!8.89e-08!63;UBERON:0000477!1.93e-07!286;UBERON:0004211!3.72e-07!16;UBERON:0001285!3.72e-07!16;UBERON:0007684!3.72e-07!16;UBERON:0003220!3.72e-07!16;UBERON:0004208!3.72e-07!16;UBERON:0000475!4.20e-07!365;UBERON:0000025!5.13e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;4.24e-08;74!UBERON:0006555;7.40e-08;15!UBERON:0004819;7.40e-08;15!UBERON:0001285;7.40e-08;15!UBERON:0007684;7.40e-08;15!UBERON:0000353;7.69e-08;15!UBERON:0001225;4.99e-07;12!UBERON:0008987;4.99e-07;12!UBERON:0001851;5.25e-07;15 | |||
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| ||
|short_description=p2@PRMT1 | |short_description=p2@PRMT1 | ||
}} | }} |
Latest revision as of 08:41, 19 September 2015
Short description: | p2@PRMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000449059, uc002ppd.2, uc002ppe.2, uc002ppf.2, uc002ppg.2, uc010enf.1_5end |
EntrezGene: | PRMT1 |
HGNC: | 5187 |
UniProt: | B4DJ87Q99873 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.01e-19 | 250 |
epithelial cell | 7.86e-14 | 253 |
mesodermal cell | 2.57e-11 | 121 |
electrically responsive cell | 5.16e-10 | 61 |
electrically active cell | 5.16e-10 | 61 |
muscle cell | 4.05e-08 | 55 |
muscle precursor cell | 4.53e-08 | 58 |
myoblast | 4.53e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.53e-08 | 58 |
smooth muscle cell | 1.52e-07 | 43 |
smooth muscle myoblast | 1.52e-07 | 43 |
epithelial cell of nephron | 1.90e-07 | 15 |
endothelial cell | 2.79e-07 | 36 |
vascular associated smooth muscle cell | 2.96e-07 | 32 |
meso-epithelial cell | 3.68e-07 | 45 |
kidney cortical cell | 9.69e-07 | 12 |
renal cortical epithelial cell | 9.69e-07 | 12 |