FFCP PHASE1:Hg19::chr18:33077556..33077610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125476 | |EntrezGene=125476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26994 | |HGNC=26994 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002kyx.3_5end | |association_with_transcript=0bp_to_uc002kyx.3_5end | ||
|cluster_id=chr18:33077556..33077610,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_INO80C_5end | |description=CAGE_peak_3_at_INO80C_5end | ||
|id=chr18:33077556..33077610,- | |id=chr18:33077556..33077610,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!7.68e-16!69;UBERON:0006238!7.68e-16!69;UBERON:0001049!8.02e-16!57;UBERON:0005068!8.02e-16!57;UBERON:0006241!8.02e-16!57;UBERON:0007135!8.02e-16!57;UBERON:0000073!3.16e-15!94;UBERON:0001016!3.16e-15!94;UBERON:0002780!5.62e-15!41;UBERON:0001890!5.62e-15!41;UBERON:0006240!5.62e-15!41;UBERON:0001017!2.01e-14!82;UBERON:0002616!2.26e-14!59;UBERON:0003080!4.23e-14!42;UBERON:0005743!1.12e-13!86;UBERON:0001893!9.53e-13!34;UBERON:0002791!2.88e-12!33;UBERON:0001869!4.49e-12!32;UBERON:0002020!1.04e-11!34;UBERON:0003528!1.04e-11!34;UBERON:0000924!6.91e-10!173;UBERON:0006601!6.91e-10!173;UBERON:0003056!8.39e-10!61;UBERON:0002346!9.29e-10!90;UBERON:0004121!1.56e-09!169;UBERON:0002619!1.81e-09!22;UBERON:0003075!1.99e-09!86;UBERON:0007284!1.99e-09!86;UBERON:0000956!7.89e-09!25;UBERON:0000203!7.89e-09!25;UBERON:0000033!9.69e-09!123;UBERON:0001950!1.08e-08!20;UBERON:0000153!6.34e-08!129;UBERON:0007811!6.34e-08!129 | |ontology_enrichment_uberon=UBERON:0000955!7.68e-16!69;UBERON:0006238!7.68e-16!69;UBERON:0001049!8.02e-16!57;UBERON:0005068!8.02e-16!57;UBERON:0006241!8.02e-16!57;UBERON:0007135!8.02e-16!57;UBERON:0000073!3.16e-15!94;UBERON:0001016!3.16e-15!94;UBERON:0002780!5.62e-15!41;UBERON:0001890!5.62e-15!41;UBERON:0006240!5.62e-15!41;UBERON:0001017!2.01e-14!82;UBERON:0002616!2.26e-14!59;UBERON:0003080!4.23e-14!42;UBERON:0005743!1.12e-13!86;UBERON:0001893!9.53e-13!34;UBERON:0002791!2.88e-12!33;UBERON:0001869!4.49e-12!32;UBERON:0002020!1.04e-11!34;UBERON:0003528!1.04e-11!34;UBERON:0000924!6.91e-10!173;UBERON:0006601!6.91e-10!173;UBERON:0003056!8.39e-10!61;UBERON:0002346!9.29e-10!90;UBERON:0004121!1.56e-09!169;UBERON:0002619!1.81e-09!22;UBERON:0003075!1.99e-09!86;UBERON:0007284!1.99e-09!86;UBERON:0000956!7.89e-09!25;UBERON:0000203!7.89e-09!25;UBERON:0000033!9.69e-09!123;UBERON:0001950!1.08e-08!20;UBERON:0000153!6.34e-08!129;UBERON:0007811!6.34e-08!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.79e-11;32!UBERON:0001893;3.60e-10;34!UBERON:0002791;2.26e-09;32!UBERON:0001950;1.49e-08;20!UBERON:0002780;1.59e-08;41!UBERON:0001890;1.59e-08;41!UBERON:0003528;1.92e-08;34!UBERON:0002020;1.92e-08;34!UBERON:0002619;1.25e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.28e-11,32;UBERON:0002780,4.05e-11,41;UBERON:0001890,4.05e-11,41;UBERON:0003080,4.05e-11,41;UBERON:0006240,4.05e-11,41;UBERON:0001893,1.65e-10,34;UBERON:0002791,7.21e-10,32;UBERON:0003056,3.81e-09,61;UBERON:0003528,4.09e-09,34;UBERON:0002020,4.09e-09,34;UBERON:0001950,1.45e-08,20;UBERON:0001016,1.45e-08,89;UBERON:0000073,1.01e-07,53;UBERON:0002616,1.01e-07,53;UBERON:0002619,1.22e-07,22;UBERON:0000955,1.61e-07,68;UBERON:0006238,1.61e-07,68;UBERON:0001049,4.15e-07,56;UBERON:0005068,4.15e-07,56;UBERON:0006241,4.15e-07,56;UBERON:0007135,4.15e-07,56 | |||
|phase1_expression=0,0.642301571672949,0.704772020479856,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0.436882744260345,0,0.123766352960047,0,0.672325146451775,0,0,0,0.738726348460727,0.612002073732759,0.626909442956176,0.286235987131057,0.136874425072884,0.376627918784408,1.22261449196722,0.738905305049512,1.65292640758726,0,0,0.464448369948228,1.83884244895785,0.30120591877825,0.739508020333575,3.87336002901508,1.56386155736164,0.587200878669695,1.66198622559563,0.200544447470142,1.08505435357926,0,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0.251248665256743,1.0429658368404,1.08594422352558,0,0,0.632924774881769,0,0.425208599930087,1.04829322754188,0.673971786878971,0.600707571366025,0.803627933485401,0.285012743741249,0.19891667719909,0,0,0,0.889509253863555,2.56038133539904,0,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0.590129310341499,0,1.02800749499755,0.668745981562712,0.32592226663359,0.473447805734733,0,0.222820913770347,0.589211814949674,0.443067789167242,0.270803863765016,0.25618263945135,0.390178042679635,0,0,0,0.741432815810302,0.535081656179426,0,0.226618685395132,0,0.34362744548263,1.01207876807801,0.318565414324097,0,0,0.602300476311091,0,1.24930726552346,0.236777252044017,0,1.00803371612366,0.802320587350522,0.434473211648397,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0.973269740605272,0.378139268656271,0.443458794925128,0.263504357079378,19.8433299379035,0,0.741568885568859,0,0,0.26591592103773,0.238490624305342,0,0,0.79504962946682,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0,0,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.17859945656816,0,0.112611480483322,3.06633274931766,0.949265659568129,0,0,0,0.872188104285069,0,0.379891534993739,0.794455084879313,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0.234321431833797,0,0,0,0.469737994575059,0.161872944368132,0.421352420106746,0.204154171254893,0.122834317311768,0.309977343527296,1.18800285728205,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0.675105328965065,0.292311015483596,0.252433774244115,0.0920498986422993,0.323292113637624,0.355009592516614,0.10075209822764,0.169560592310488,0,0.545492241181669,0,0.121973706129595,0.265059536642971,0.348581828608555,0.207322110030741,0,0.72995471815166,0,0,1.38134921352481,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.653638332277218,0.237270619111097,0.404493924480493,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.201057944823262,0.462942225792648,0.325808305310325,0,1.44331342025273,0,0,0.433099343283221,0,0,0.790204397959275,0,0,0,0.297262324577456,0,0.503946384596579,0.141775097242386,0.447792613514241,0,0,0.985326475791887,0.352193736052904,1.65862492432618,2.16179930125442,1.13618190083742,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0.301439377059586,0,0,0,0.502257091432126,0,0.718874566474748,0,0,0.144781306667579,0.205476322550383,0,0.784596007954691,0.197030760201927,0.862510299438069,0,0.508189248444927,0,1.54657762555539,0.502548796003046,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,1.37257369524342,0,0.431428401637234,0.640365346820666,1.5156378572313,1.66435439510497,0.30239029332968,0.496215615637554,0,0.280660094433074,0.128139149255701,0.511707249066704,0.482561763430822,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.200506470303285,1.01289087829486,0.114814448164607,0.182091168006717,0.131124414959424,0,0.231046011313244,0.784349769176855,0,0.316654886678627,0,0.340187410553031,0,0,0.270946437543853,0,0,1.66215201785745,0,0.657779629937804,0.522870902049801,0,0.328014645699706,0,0.721287081534056,0.183138929636687,0.907604499126468,0,0,0,0.386682873168488,1.23238893691716,0.614014698904518,0,0.751941714077915,0,0.0852266274161009,0.445160178233687,0.991709492165869,0.192190067365106,1.40373983744043,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0.632758849437452,0.190630193923825,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,1.21856744815642,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0.35667105148125,0.354761064070598,0,0.658589785919804,0,0.349934720244983,0.3848884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| ||
|short_description=p3@INO80C | |short_description=p3@INO80C | ||
}} | }} |
Latest revision as of 08:51, 19 September 2015
Short description: | p3@INO80C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_INO80C_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_uc002kyx.3_5end |
EntrezGene: | INO80C |
HGNC: | 26994 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 2.28e-11 | 32 |
regional part of forebrain | 4.05e-11 | 41 |
forebrain | 4.05e-11 | 41 |
anterior neural tube | 4.05e-11 | 41 |
future forebrain | 4.05e-11 | 41 |
telencephalon | 1.65e-10 | 34 |
regional part of telencephalon | 7.21e-10 | 32 |
pre-chordal neural plate | 3.81e-09 | 61 |
brain grey matter | 4.09e-09 | 34 |
gray matter | 4.09e-09 | 34 |
neocortex | 1.45e-08 | 20 |
nervous system | 1.45e-08 | 89 |
regional part of nervous system | 1.01e-07 | 53 |
regional part of brain | 1.01e-07 | 53 |
regional part of cerebral cortex | 1.22e-07 | 22 |
brain | 1.61e-07 | 68 |
future brain | 1.61e-07 | 68 |
neural tube | 4.15e-07 | 56 |
neural rod | 4.15e-07 | 56 |
future spinal cord | 4.15e-07 | 56 |
neural keel | 4.15e-07 | 56 |