FFCP PHASE1:Hg19::chr1:192777904..192777909,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:192777904..192777909,+
|short_description=p2@RGS2
|description=CAGE_peak_2_at_RGS2_5end
|association_with_transcript=-259bp_to_ENST00000483295,NM_002923,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5997 | |EntrezGene=5997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9998 | |HGNC=9998 | ||
|TSSclassifier=strong | |||
|UniProt=P41220 | |UniProt=P41220 | ||
|association_with_transcript=-259bp_to_ENST00000483295,NM_002923,uc001gsl.2_5end | |||
|cluster_id=chr1:192777904..192777909,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_RGS2_5end | |||
|id=chr1:192777904..192777909,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.23e-35!42;CL:0000860!5.80e-32!45;CL:0000766!8.92e-30!76;CL:0000738!3.16e-25!140;CL:0000557!5.25e-24!71;CL:0002009!2.81e-21!65;CL:0000839!2.85e-21!70;CL:0002194!4.46e-19!63;CL:0000576!4.46e-19!63;CL:0000040!4.46e-19!63;CL:0000559!4.46e-19!63;CL:0000763!6.33e-18!112;CL:0000049!6.33e-18!112;CL:0000037!4.24e-17!172;CL:0000566!4.24e-17!172;CL:0002031!2.29e-16!124;CL:0002087!1.35e-15!119;CL:0000988!3.44e-15!182;CL:0002032!5.14e-15!165;CL:0000837!5.14e-15!165;CL:0002393!3.90e-13!9;CL:0002397!3.90e-13!9;CL:0000094!1.56e-10!8;CL:0000081!3.24e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000094;2.10e-31;8!CL:0000081;1.01e-22;11!CL:0000775;1.34e-22;3!CL:0001014;4.46e-15;2!CL:0001016;4.46e-15;2!CL:0000767;3.34e-10;3!CL:0000226;5.42e-10;3!CL:0000842;5.42e-10;3!CL:0000766;1.37e-08;69!CL:0000860;1.97e-08;33!CL:0002057;1.97e-08;33!CL:0002581;4.10e-08;1!CL:0000473;5.35e-07;39!CL:0000234;5.35e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.47e-31,8;CL:0000081,1.13e-22,11;CL:0000775,1.29e-22,3;CL:0000766,2.78e-21,72;CL:0000738,2.91e-18,136;CL:0000763,3.29e-17,108;CL:0000049,3.29e-17,108;CL:0001014,3.37e-15,2;CL:0001016,3.37e-15,2;CL:0000037,4.86e-14,168;CL:0000988,3.99e-13,177;CL:0000557,1.74e-12,67;CL:0002032,8.56e-12,161;CL:0000837,8.56e-12,161;CL:0000767,3.93e-10,3;CL:0000226,9.79e-10,3;CL:0000842,9.79e-10,3;CL:0002009,1.75e-09,61;CL:0000860,2.15e-09,42;CL:0002057,2.15e-09,42;CL:0000839,1.19e-08,66;CL:0002581,3.33e-08,1;CL:0000473,4.41e-08,48;CL:0000234,4.41e-08,48;CL:0002031,3.24e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.43e-27!102;UBERON:0003061!8.43e-27!102;UBERON:0002193!5.96e-23!112;UBERON:0002371!3.80e-21!80;UBERON:0001474!5.92e-20!86;UBERON:0004765!4.12e-15!101;UBERON:0001434!4.12e-15!101;UBERON:0002405!3.11e-14!115;UBERON:0000178!4.92e-09!15;UBERON:0000179!4.92e-09!15;UBERON:0000463!4.92e-09!15;UBERON:0003081!3.63e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;1.51e-08;1!UBERON:0005352;1.51e-08;1!UBERON:0000996;4.10e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.74e-13,98;UBERON:0003061,9.74e-13,98;UBERON:0002193,2.64e-11,108;UBERON:0002371,9.03e-11,76;UBERON:0001474,7.80e-10,82;UBERON:0004765,8.86e-09,90;UBERON:0001000,1.63e-08,1;UBERON:0005352,1.63e-08,1;UBERON:0002405,1.98e-08,93;UBERON:0000996,3.83e-08,1;UBERON:0001434,1.07e-07,100 | |||
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| ||
|short_description=p2@RGS2 | |||
}} | }} |
Latest revision as of 10:29, 19 September 2015
Short description: | p2@RGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RGS2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -259bp_to_ENST00000483295, NM_002923, uc001gsl.2_5end |
EntrezGene: | RGS2 |
HGNC: | 9998 |
UniProt: | P41220 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.47e-31 | 8 |
blood cell | 1.13e-22 | 11 |
neutrophil | 1.29e-22 | 3 |
myeloid leukocyte | 2.78e-21 | 72 |
leukocyte | 2.91e-18 | 136 |
myeloid cell | 3.29e-17 | 108 |
common myeloid progenitor | 3.29e-17 | 108 |
CD1a-positive Langerhans cell | 3.37e-15 | 2 |
immature CD1a-positive Langerhans cell | 3.37e-15 | 2 |
hematopoietic stem cell | 4.86e-14 | 168 |
hematopoietic cell | 3.99e-13 | 177 |
granulocyte monocyte progenitor cell | 1.74e-12 | 67 |
hematopoietic oligopotent progenitor cell | 8.56e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.56e-12 | 161 |
basophil | 3.93e-10 | 3 |
single nucleate cell | 9.79e-10 | 3 |
mononuclear cell | 9.79e-10 | 3 |
macrophage dendritic cell progenitor | 1.75e-09 | 61 |
classical monocyte | 2.15e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.15e-09 | 42 |
myeloid lineage restricted progenitor cell | 1.19e-08 | 66 |
perirenal preadipocyte | 3.33e-08 | 1 |
defensive cell | 4.41e-08 | 48 |
phagocyte | 4.41e-08 | 48 |
hematopoietic lineage restricted progenitor cell | 3.24e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.74e-13 | 98 |
blood island | 9.74e-13 | 98 |
hemolymphoid system | 2.64e-11 | 108 |
bone marrow | 9.03e-11 | 76 |
bone element | 7.80e-10 | 82 |
skeletal element | 8.86e-09 | 90 |
vas deferens | 1.63e-08 | 1 |
spermatic cord | 1.63e-08 | 1 |
immune system | 1.98e-08 | 93 |
vagina | 3.83e-08 | 1 |
skeletal system | 1.07e-07 | 100 |