FFCP PHASE1:Hg19::chr11:65430038..65430053,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5970 | |EntrezGene=5970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9955 | |HGNC=9955 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJR1 | |UniProt=E9PJR1 | ||
|association_with_transcript=-139bp_to_ENST00000527874_5end | |association_with_transcript=-139bp_to_ENST00000527874_5end | ||
|cluster_id=chr11:65430038..65430053,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_12_at_RELA_5end | |description=CAGE_peak_12_at_RELA_5end | ||
|id=chr11:65430038..65430053,- | |id=chr11:65430038..65430053,- | ||
|ontology_enrichment_celltype=CL:0002057!4.13e-25!42;CL:0000860!8.27e-23!45;CL:0002194!1.88e-14!63;CL:0000576!1.88e-14!63;CL:0000040!1.88e-14!63;CL:0000559!1.88e-14!63;CL:0002139!7.02e-14!24;CL:0002009!9.52e-14!65;CL:0000839!2.24e-13!70;CL:0000557!4.58e-13!71;CL:0000766!1.21e-11!76;CL:0000359!9.07e-11!32;CL:0002371!5.21e-10!591;CL:0000115!1.90e-09!35;CL:0000071!3.27e-09!18;CL:0002546!3.27e-09!18;CL:0002595!1.23e-08!5;CL:1000413!1.60e-08!9;CL:0000222!2.43e-08!119;CL:0000144!2.71e-08!625;CL:0002078!1.61e-07!44;CL:0000192!3.99e-07!42;CL:0000514!3.99e-07!42 | |ontology_enrichment_celltype=CL:0002057!4.13e-25!42;CL:0000860!8.27e-23!45;CL:0002194!1.88e-14!63;CL:0000576!1.88e-14!63;CL:0000040!1.88e-14!63;CL:0000559!1.88e-14!63;CL:0002139!7.02e-14!24;CL:0002009!9.52e-14!65;CL:0000839!2.24e-13!70;CL:0000557!4.58e-13!71;CL:0000766!1.21e-11!76;CL:0000359!9.07e-11!32;CL:0002371!5.21e-10!591;CL:0000115!1.90e-09!35;CL:0000071!3.27e-09!18;CL:0002546!3.27e-09!18;CL:0002595!1.23e-08!5;CL:1000413!1.60e-08!9;CL:0000222!2.43e-08!119;CL:0000144!2.71e-08!625;CL:0002078!1.61e-07!44;CL:0000192!3.99e-07!42;CL:0000514!3.99e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.28e-86;33!CL:0002057;7.28e-86;33!CL:0000473;7.93e-59;39!CL:0000234;7.93e-59;39!CL:0000576;1.15e-38;48!CL:0000766;1.88e-25;69!CL:0002087;9.69e-10;104!CL:0000763;1.20e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.93e-71,42;CL:0002057,2.93e-71,42;CL:0000473,9.14e-62,48;CL:0000234,9.14e-62,48;CL:0002194,1.81e-48,59;CL:0000576,1.81e-48,59;CL:0000040,1.81e-48,59;CL:0000559,1.81e-48,59;CL:0000839,5.33e-47,66;CL:0002009,9.42e-47,61;CL:0000557,3.09e-46,67;CL:0000766,9.82e-43,72;CL:0000763,5.44e-27,108;CL:0000049,5.44e-27,108;CL:0002031,8.03e-24,120;CL:0002087,9.22e-23,115;CL:0000738,1.85e-20,136;CL:0002032,1.56e-16,161;CL:0000837,1.56e-16,161;CL:0000037,1.22e-15,168;CL:0000988,1.34e-14,177;CL:0000048,1.34e-07,427;CL:0000723,2.08e-07,433;CL:0000034,3.64e-07,441;CL:0000134,6.28e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;6.02e-54;42!CL:0000049;2.70e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.23e-22!69;UBERON:0001637!2.24e-19!42;UBERON:0003509!2.24e-19!42;UBERON:0004572!2.24e-19!42;UBERON:0001981!3.34e-19!60;UBERON:0007500!3.34e-19!60;UBERON:0004537!3.34e-19!60;UBERON:0006965!3.34e-19!60;UBERON:0002049!6.31e-19!79;UBERON:0007798!6.31e-19!79;UBERON:0003081!2.15e-17!216;UBERON:0004573!1.25e-16!33;UBERON:0004571!1.25e-16!33;UBERON:0004872!5.76e-13!84;UBERON:0002204!6.69e-13!167;UBERON:0001009!2.27e-12!113;UBERON:0004535!3.33e-12!110;UBERON:0001474!5.80e-11!86;UBERON:0002371!1.21e-10!80;UBERON:0004765!3.00e-10!101;UBERON:0001434!3.00e-10!101;UBERON:0001986!3.27e-09!18;UBERON:0004638!3.27e-09!18;UBERON:0004852!3.27e-09!18;UBERON:0002405!8.78e-09!115;UBERON:0000947!1.18e-08!21;UBERON:0010191!1.18e-08!21;UBERON:0003834!1.23e-08!5;UBERON:0001533!1.23e-08!5;UBERON:0003915!1.60e-08!9;UBERON:0004700!1.60e-08!9;UBERON:0001917!1.60e-08!9;UBERON:0002193!1.71e-08!112;UBERON:0003914!1.78e-08!118;UBERON:0000467!1.76e-07!625;UBERON:0000480!2.01e-07!626;UBERON:0003513!2.21e-07!8;UBERON:0000487!4.83e-07!22;UBERON:0000468!7.31e-07!659;UBERON:0000926!9.40e-07!448;UBERON:0004120!9.40e-07!448;UBERON:0006603!9.40e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;6.97e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.93e-40,76;UBERON:0001474,5.41e-37,82;UBERON:0004765,2.62e-33,90;UBERON:0002405,4.36e-32,93;UBERON:0002390,3.23e-30,98;UBERON:0003061,3.23e-30,98;UBERON:0001434,1.61e-29,100;UBERON:0002193,5.44e-27,108;UBERON:0003081,5.27e-26,203;UBERON:0002204,1.50e-22,167;UBERON:0000926,6.24e-16,315;UBERON:0004120,6.24e-16,315;UBERON:0006603,6.24e-16,315;UBERON:0003513,7.97e-08,7 | |||
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| ||
|short_description=p12@RELA | |short_description=p12@RELA | ||
}} | }} |
Latest revision as of 10:34, 19 September 2015
Short description: | p12@RELA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RELA_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -139bp_to_ENST00000527874_5end |
EntrezGene: | RELA |
HGNC: | 9955 |
UniProt: | E9PJR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.93e-71 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.93e-71 | 42 |
defensive cell | 9.14e-62 | 48 |
phagocyte | 9.14e-62 | 48 |
monopoietic cell | 1.81e-48 | 59 |
monocyte | 1.81e-48 | 59 |
monoblast | 1.81e-48 | 59 |
promonocyte | 1.81e-48 | 59 |
myeloid lineage restricted progenitor cell | 5.33e-47 | 66 |
macrophage dendritic cell progenitor | 9.42e-47 | 61 |
granulocyte monocyte progenitor cell | 3.09e-46 | 67 |
myeloid leukocyte | 9.82e-43 | 72 |
myeloid cell | 5.44e-27 | 108 |
common myeloid progenitor | 5.44e-27 | 108 |
hematopoietic lineage restricted progenitor cell | 8.03e-24 | 120 |
nongranular leukocyte | 9.22e-23 | 115 |
leukocyte | 1.85e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.56e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-16 | 161 |
hematopoietic stem cell | 1.22e-15 | 168 |
hematopoietic cell | 1.34e-14 | 177 |
multi fate stem cell | 1.34e-07 | 427 |
somatic stem cell | 2.08e-07 | 433 |
stem cell | 3.64e-07 | 441 |
mesenchymal cell | 6.28e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.93e-40 | 76 |
bone element | 5.41e-37 | 82 |
skeletal element | 2.62e-33 | 90 |
immune system | 4.36e-32 | 93 |
hematopoietic system | 3.23e-30 | 98 |
blood island | 3.23e-30 | 98 |
skeletal system | 1.61e-29 | 100 |
hemolymphoid system | 5.44e-27 | 108 |
lateral plate mesoderm | 5.27e-26 | 203 |
musculoskeletal system | 1.50e-22 | 167 |
mesoderm | 6.24e-16 | 315 |
mesoderm-derived structure | 6.24e-16 | 315 |
presumptive mesoderm | 6.24e-16 | 315 |
trunk blood vessel | 7.97e-08 | 7 |