FFCP PHASE1:Hg19::chr11:65430586..65430593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5970 | |EntrezGene=5970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9955 | |HGNC=9955 | ||
|TSSclassifier=strong | |||
|UniProt=Q04206 | |UniProt=Q04206 | ||
|association_with_transcript=-21bp_to_ENST00000406246_5end | |association_with_transcript=-21bp_to_ENST00000406246_5end | ||
|cluster_id=chr11:65430586..65430593,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_5_at_RELA_5end | |description=CAGE_peak_5_at_RELA_5end | ||
|id=chr11:65430586..65430593,- | |id=chr11:65430586..65430593,- | ||
|ontology_enrichment_celltype=CL:0002057!4.72e-16!42;CL:0000860!4.02e-15!45;CL:0000766!9.98e-10!76;CL:0002371!9.43e-09!591;CL:0000222!1.10e-08!119;CL:0000144!1.60e-08!625;CL:0000557!3.87e-08!71;CL:0002009!4.54e-08!65;CL:0000012!9.43e-08!682;CL:0000839!1.02e-07!70;CL:0000548!1.68e-07!679;CL:0000004!1.68e-07!679;CL:0000255!1.68e-07!679;CL:0002194!2.19e-07!63;CL:0000576!2.19e-07!63;CL:0000040!2.19e-07!63;CL:0000559!2.19e-07!63 | |ontology_enrichment_celltype=CL:0002057!4.72e-16!42;CL:0000860!4.02e-15!45;CL:0000766!9.98e-10!76;CL:0002371!9.43e-09!591;CL:0000222!1.10e-08!119;CL:0000144!1.60e-08!625;CL:0000557!3.87e-08!71;CL:0002009!4.54e-08!65;CL:0000012!9.43e-08!682;CL:0000839!1.02e-07!70;CL:0000548!1.68e-07!679;CL:0000004!1.68e-07!679;CL:0000255!1.68e-07!679;CL:0002194!2.19e-07!63;CL:0000576!2.19e-07!63;CL:0000040!2.19e-07!63;CL:0000559!2.19e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-41;33!CL:0002057;2.03e-41;33!CL:0000473;1.84e-28;39!CL:0000234;1.84e-28;39!CL:0000576;2.63e-20;48!CL:0000766;7.69e-15;69!CL:0000763;3.64e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.25e-38,42;CL:0002057,1.25e-38,42;CL:0000473,1.55e-32,48;CL:0000234,1.55e-32,48;CL:0000766,1.51e-29,72;CL:0000557,7.39e-27,67;CL:0000839,1.51e-25,66;CL:0002009,8.38e-25,61;CL:0002194,4.74e-24,59;CL:0000576,4.74e-24,59;CL:0000040,4.74e-24,59;CL:0000559,4.74e-24,59;CL:0000763,8.96e-21,108;CL:0000049,8.96e-21,108;CL:0000738,6.02e-20,136;CL:0002031,4.92e-16,120;CL:0002032,8.70e-15,161;CL:0000837,8.70e-15,161;CL:0000037,1.24e-13,168;CL:0002087,5.06e-13,115;CL:0000988,5.43e-13,177;CL:0000723,1.69e-08,433;CL:0000048,2.05e-08,427;CL:0000134,2.30e-08,354;CL:0000034,5.24e-08,441;CL:0002320,6.82e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.65e-10!216;UBERON:0002204!4.85e-09!167;UBERON:0000055!1.41e-08!69;UBERON:0002371!3.03e-08!80;UBERON:0001474!2.12e-07!86;UBERON:0002193!2.37e-07!112;UBERON:0001981!2.71e-07!60;UBERON:0007500!2.71e-07!60;UBERON:0004537!2.71e-07!60;UBERON:0006965!2.71e-07!60;UBERON:0004765!3.76e-07!101;UBERON:0001434!3.76e-07!101;UBERON:0002049!4.54e-07!79;UBERON:0007798!4.54e-07!79;UBERON:0000926!4.99e-07!448;UBERON:0004120!4.99e-07!448;UBERON:0006603!4.99e-07!448;UBERON:0002405!8.00e-07!115;UBERON:0001637!8.10e-07!42;UBERON:0003509!8.10e-07!42;UBERON:0004572!8.10e-07!42 | |ontology_enrichment_uberon=UBERON:0003081!1.65e-10!216;UBERON:0002204!4.85e-09!167;UBERON:0000055!1.41e-08!69;UBERON:0002371!3.03e-08!80;UBERON:0001474!2.12e-07!86;UBERON:0002193!2.37e-07!112;UBERON:0001981!2.71e-07!60;UBERON:0007500!2.71e-07!60;UBERON:0004537!2.71e-07!60;UBERON:0006965!2.71e-07!60;UBERON:0004765!3.76e-07!101;UBERON:0001434!3.76e-07!101;UBERON:0002049!4.54e-07!79;UBERON:0007798!4.54e-07!79;UBERON:0000926!4.99e-07!448;UBERON:0004120!4.99e-07!448;UBERON:0006603!4.99e-07!448;UBERON:0002405!8.00e-07!115;UBERON:0001637!8.10e-07!42;UBERON:0003509!8.10e-07!42;UBERON:0004572!8.10e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.89e-24,76;UBERON:0002405,5.98e-23,93;UBERON:0001474,1.99e-21,82;UBERON:0002193,2.17e-19,108;UBERON:0004765,1.36e-18,90;UBERON:0002390,1.89e-17,98;UBERON:0003061,1.89e-17,98;UBERON:0001434,9.73e-17,100;UBERON:0003081,3.86e-13,203;UBERON:0002204,7.32e-12,167;UBERON:0002384,1.13e-07,371;UBERON:0000926,1.29e-07,315;UBERON:0004120,1.29e-07,315;UBERON:0006603,1.29e-07,315 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0.436882744260345,0,0.37129905888014,0,0,0.602694528023977,0.730310090387373,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0,1.18009283054671,0.383829398097213,0.464448369948228,0.919421224478927,0,0,0,0,0,1.10799081706375,1.00272223735071,0.217010870715852,0,0,0,0.872389432677388,0.755751887377619,2.42584061187816,4.88100977501938,4.52284676824008,4.95530193432166,13.5215424391411,9.47794614157672,10.4052181150977,6.89491361473237,5.80936215225443,10.8341189275473,4.32957380947991,1.63743690034707,2.9214052977861,7.03992952453076,6.41858054152187,9.59005688698562,3.95821560224059,3.78980949481101,4.26224750532694,19.1538097494865,19.2910976394988,14.3249117268982,7.03496262718881,6.77927793946262,8.47036494349955,32.6915731422019,14.362827803515,14.2408074348398,0.211255286311942,0.212604299965044,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,1.76171156811282,1.52909291250092,0,0.560508562981536,0.526768169550154,0.196709770113833,0.393010762749165,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,1.61285394579786,1.06976078313403,0.724122019413995,0,0,0,0,0,0,0,1.45990461090791,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0.79504962946682,0.860234595106124,0.694281003215189,1.69592382577203,0.838998872419812,0.275118041940067,1.67195973229448,0.258416759169329,0,0.33472061276467,2.41697590265488,0,0.732186172644509,1.10298924103761,0.81014194788176,0.267899184852239,0.44905874525234,0.450445921933289,0,3.79706263827252,1.46561395144326,3.9534125230819,3.87780264148325,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0.326923806226917,0,0,0.468642863667593,0,1.1409436430889,0.298897361103602,0.23486899728753,0.161872944368132,0.842704840213491,0.204154171254893,0.491337269247072,0.309977343527296,0,0.247266929278557,4.55080680969013,1.43723628363248,0.168336113954066,0.125118519871964,0.554128230968366,0,0.30648779579902,0.751190294532984,0.453728732640084,0.358779271377724,0.640672166455702,0.635795703478686,0,0.515262646192195,1.28820270022815,0.37223371266318,0.337552664482532,0.292311015483596,0.757301322732344,0.276149695926898,0,0.355009592516614,0.403008392910561,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0.110293972732394,0.435758888184812,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,1.26755034821831,0,0,0,0,0.343135620597051,0.439001141634502,1.1240175325762,0.502644862058154,0.0925884451585296,0,1.03993478527958,0,0,0.352226082707465,1.01056513432752,3.70388410061289,0.951270761172991,0.790204397959275,0,0,0,0,0,0.503946384596579,0.283550194484773,0.179117045405697,0,0.383382679165211,0,0,2.28060927094849,1.72943944100354,1.51490920111656,0,0,0,0,0.102827492703324,0,0,0.784917590417525,0,0.4400297149257,0.517086863031111,0,2.535908257668,0.531876233169741,0,0.771622122786426,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0,0,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0.239624855491583,0,1.42636905040718,0.289562613335158,0.410952645100767,0.358121926479791,0,0.788123040807709,1.2937654491571,1.02674429023799,0.508189248444927,0,0,0,0,0.749007023947182,0,2.90090859405225,0,0,0.271265023699736,0.415941723061614,0.178428988797162,0.157702415033935,0.35142424497814,0.601892199455438,0,0,1.32845119707087,0.921845842708516,0.260650843404249,0.195801157462741,0,0.206768026122887,0.647142602455851,0.640365346820666,0.303127571446259,0,0.30239029332968,0.248107807818777,0.460385919864187,0.280660094433074,0.384417447767103,0,0.160853921143607,0,1.07946785661859,0.355123450626254,0.9033987161519,0,0.581051892299796,0,0.40101294060657,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0.616122696835318,1.56869953835371,0,1.05551628892876,1.13733384070897,0.850468526382578,0,1.54227252690289,0.270946437543853,1.00337954770971,0.254876273045038,0,0.447749509444357,0.657779629937804,0,0.256450125116389,0,0,0.206082023295445,0.0915694648183434,0,1.72279661398852,1.30012049207304,0,0.773365746336976,0,0.15350367472613,0.275673144969061,0,0.290033387828457,0.0852266274161009,0.267096106940212,0.165284915360978,0.384380134730212,0.255225424989168,0.4046311234222,0.929691098594572,0,0,1.84820148105653,0.532306030317022,0.869932992075073,1.11194531462352,0,0.372158369359667,0,0,0.255897791311334,0,0.95460974377781,1.56989728039846,0.359744915166629,0,0.117812402345686,0.606547444719948,0,0.842516912477962,0.48763373908959,1.46228093778771,0,0.409499734223957,0,0,1.10273068709225,0.66343897524122,1.31535265576129,0,0,0.811641507850816,0.6196469961995,0.84508680759672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| ||
|short_description=p5@RELA | |short_description=p5@RELA | ||
}} | }} |
Latest revision as of 10:40, 19 September 2015
Short description: | p5@RELA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RELA_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -21bp_to_ENST00000406246_5end |
EntrezGene: | RELA |
HGNC: | 9955 |
UniProt: | Q04206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.25e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.25e-38 | 42 |
defensive cell | 1.55e-32 | 48 |
phagocyte | 1.55e-32 | 48 |
myeloid leukocyte | 1.51e-29 | 72 |
granulocyte monocyte progenitor cell | 7.39e-27 | 67 |
myeloid lineage restricted progenitor cell | 1.51e-25 | 66 |
macrophage dendritic cell progenitor | 8.38e-25 | 61 |
monopoietic cell | 4.74e-24 | 59 |
monocyte | 4.74e-24 | 59 |
monoblast | 4.74e-24 | 59 |
promonocyte | 4.74e-24 | 59 |
myeloid cell | 8.96e-21 | 108 |
common myeloid progenitor | 8.96e-21 | 108 |
leukocyte | 6.02e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 4.92e-16 | 120 |
hematopoietic oligopotent progenitor cell | 8.70e-15 | 161 |
hematopoietic multipotent progenitor cell | 8.70e-15 | 161 |
hematopoietic stem cell | 1.24e-13 | 168 |
nongranular leukocyte | 5.06e-13 | 115 |
hematopoietic cell | 5.43e-13 | 177 |
somatic stem cell | 1.69e-08 | 433 |
multi fate stem cell | 2.05e-08 | 427 |
mesenchymal cell | 2.30e-08 | 354 |
stem cell | 5.24e-08 | 441 |
connective tissue cell | 6.82e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.89e-24 | 76 |
immune system | 5.98e-23 | 93 |
bone element | 1.99e-21 | 82 |
hemolymphoid system | 2.17e-19 | 108 |
skeletal element | 1.36e-18 | 90 |
hematopoietic system | 1.89e-17 | 98 |
blood island | 1.89e-17 | 98 |
skeletal system | 9.73e-17 | 100 |
lateral plate mesoderm | 3.86e-13 | 203 |
musculoskeletal system | 7.32e-12 | 167 |
connective tissue | 1.13e-07 | 371 |
mesoderm | 1.29e-07 | 315 |
mesoderm-derived structure | 1.29e-07 | 315 |
presumptive mesoderm | 1.29e-07 | 315 |