FFCP PHASE1:Hg19::chr3:69171708..69171723,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:69171708..69171723,- to FFCP PHASE1:Hg19::chr3:69171708..69171723,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56203 | |EntrezGene=56203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6649 | |HGNC=6649 | ||
|TSSclassifier=strong | |||
|UniProt=Q0VAK6 | |UniProt=Q0VAK6 | ||
|association_with_transcript=0bp_to_ENST00000420581_5end | |||
|cluster_id=chr3:69171708..69171723,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_2_at_LMOD3_5end | |||
|id=chr3:69171708..69171723,- | |||
|ontology_enrichment_celltype=CL:0000188!2.00e-13!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;1.10e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.02e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.73e-12;4!UBERON:0007284;6.73e-12;4!UBERON:0006603;2.90e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.30e-36!115;UBERON:0002780!1.65e-12!41;UBERON:0001890!1.65e-12!41;UBERON:0006240!1.65e-12!41;UBERON:0003080!4.02e-12!42;UBERON:0003296!2.95e-11!4;UBERON:0010133!2.95e-11!4;UBERON:0000481!1.78e-10!347;UBERON:0001894!2.26e-09!7;UBERON:0006222!2.26e-09!7;UBERON:0003978!2.78e-09!3;UBERON:0009751!2.78e-09!3;UBERON:0000946!2.78e-09!3;UBERON:0002523!2.78e-09!3;UBERON:0005983!2.78e-09!3;UBERON:0002165!2.78e-09!3;UBERON:0002062!2.78e-09!3;UBERON:0007280!2.78e-09!3;UBERON:0004151!2.93e-09!3;UBERON:0001049!4.55e-09!57;UBERON:0005068!4.55e-09!57;UBERON:0006241!4.55e-09!57;UBERON:0007135!4.55e-09!57;UBERON:0002616!1.25e-08!59;UBERON:0002619!2.46e-08!22;UBERON:0003056!3.25e-08!61;UBERON:0003075!4.08e-08!86;UBERON:0007284!4.08e-08!86;UBERON:0000153!8.21e-08!129;UBERON:0007811!8.21e-08!129;UBERON:0001869!1.09e-07!32;UBERON:0000955!1.35e-07!69;UBERON:0006238!1.35e-07!69;UBERON:0002346!1.53e-07!90;UBERON:0001950!1.55e-07!20;UBERON:0003103!2.17e-07!69;UBERON:0000475!2.31e-07!365;UBERON:0000483!3.06e-07!309;UBERON:0000956!3.66e-07!25;UBERON:0000203!3.66e-07!25;UBERON:0001893!4.08e-07!34;UBERON:0001630!4.12e-07!2;UBERON:0005090!4.12e-07!2;UBERON:0000119!4.54e-07!312;UBERON:0000341!5.80e-07!2;UBERON:0007100!7.41e-07!27;UBERON:0000033!8.09e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.08e-19;16!UBERON:0002036;6.08e-19;16!UBERON:0003978;1.07e-15;3!UBERON:0000946;1.07e-15;3!UBERON:0004151;1.16e-15;3!UBERON:0007100;1.02e-11;25!UBERON:0005090;1.08e-11;2!UBERON:0001630;1.08e-11;2!UBERON:0003296;1.54e-11;4!UBERON:0010133;1.54e-11;4!UBERON:0000341;2.01e-11;2!UBERON:0001905;5.66e-11;2!UBERON:0002757;5.66e-11;2!UBERON:0010134;5.66e-11;2!UBERON:0005408;5.66e-11;2!UBERON:0001899;5.66e-11;2!UBERON:0002081;7.27e-11;2!UBERON:0002133;8.03e-11;2!UBERON:0001829;1.00e-10;2!UBERON:0003127;1.05e-10;2!UBERON:0002385;4.40e-09;31!UBERON:0001015;4.40e-09;31!UBERON:0000383;4.40e-09;31!UBERON:0001723;4.92e-08;3!UBERON:0001033;4.92e-08;3!UBERON:0000948;9.50e-08;22!UBERON:0001894;8.77e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.13e-18,114;UBERON:0003978,1.22e-15,3;UBERON:0009751,1.22e-15,3;UBERON:0000946,1.22e-15,3;UBERON:0002523,1.22e-15,3;UBERON:0005983,1.22e-15,3;UBERON:0002165,1.22e-15,3;UBERON:0002062,1.22e-15,3;UBERON:0007280,1.22e-15,3;UBERON:0004151,1.34e-15,3;UBERON:0005090,1.08e-11,2;UBERON:0001630,1.08e-11,2;UBERON:0003296,1.38e-11,4;UBERON:0010133,1.38e-11,4;UBERON:0000341,2.01e-11,2;UBERON:0001905,5.53e-11,2;UBERON:0002757,5.53e-11,2;UBERON:0010134,5.53e-11,2;UBERON:0005408,5.53e-11,2;UBERON:0001899,5.53e-11,2;UBERON:0002081,8.23e-11,2;UBERON:0010227,8.23e-11,2;UBERON:0002133,9.09e-11,2;UBERON:0007100,9.65e-11,27;UBERON:0001829,1.00e-10,2;UBERON:0003127,1.05e-10,2;UBERON:0003103,9.15e-10,68;UBERON:0001723,4.92e-08,3;UBERON:0001033,4.92e-08,3;UBERON:0010056,4.92e-08,3;UBERON:0000948,4.91e-07,24;UBERON:0005498,4.91e-07,24;UBERON:0004140,4.91e-07,24;UBERON:0009881,4.91e-07,24;UBERON:0004141,4.91e-07,24;UBERON:0003084,4.91e-07,24;UBERON:0007005,4.91e-07,24;UBERON:0004139,4.91e-07,24;UBERON:0004291,4.91e-07,24;UBERON:0004797,5.83e-07,7;UBERON:0001894,8.25e-07,7;UBERON:0006222,8.25e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,2.61010939388729,0.154048617114644,0.460511024178389,1.51620229732984,0,0.290033387828457,1.36362603865761,18.5186634145214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.4165223730983,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86270007089136,0,0.0967563312890851,0.146178634172371,0,2.42472541221049,0,4.51961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0812496687017,44.4571222582666,2.15361907373044,0.998395002494955,3.86303443322914,23.8793459462804,32.0465163761684,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,17.8673831593342,23.1732189627901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0,0,3.83780436800028,45.1552172334258,0,0,11.7854403893223,6.38939072215766,1.82089681270989,0.455324382702595,0,0,0,0,0.0657727735628491,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.929931402945002,12.3439373334831,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,123.658907902888,141.879999075333,33.6346185088078,10.1999308542419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.1907014481551,16.1883813395343,0,0,0,1.84576759006678,5.2550469129137,79.4666129823909,64.6820939051181,0.875576689189638,2.58199939413635,6.32054677437425,0,0,0,0,2.34640942403454,0,0,0,2.61655931668334,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,2.61010939388729,0.154048617114644,0.460511024178389,1.51620229732984,0,0.290033387828457,1.36362603865761,18.5186634145214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.4165223730983,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.86270007089136,0,0.0967563312890851,0.146178634172371,0,2.42472541221049,0,4.51961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0812496687017,44.4571222582666,2.15361907373044,0.998395002494955,3.86303443322914,23.8793459462804,32.0465163761684,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,17.8673831593342,23.1732189627901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.41023272848151,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0,0,3.83780436800028,45.1552172334258,0,0,11.7854403893223,6.38939072215766,1.82089681270989,0.455324382702595,0,0,0,0,0.0657727735628491,0,0,0.313972371402056,0.157115589916002,0,0,0,0,0.0714765441766563,0,0.929931402945002,12.3439373334831,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,123.658907902888,141.879999075333,33.6346185088078,10.1999308542419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.1907014481551,16.1883813395343,0,0,0,1.84576759006678,5.2550469129137,79.4666129823909,64.6820939051181,0.875576689189638,2.58199939413635,6.32054677437425,0,0,0,0,2.34640942403454,0,0,0,2.61655931668334,0 | ||
|short_description=p2@LMOD3 | |||
}} | }} |
Latest revision as of 11:33, 19 September 2015
Short description: | p2@LMOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMOD3_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000420581_5end |
EntrezGene: | LMOD3 |
HGNC: | 6649 |
UniProt: | Q0VAK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.02e-08 | 9 |